RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 DZIP1Q86YF9 867 aaKnown RBP15.12■□□□□ 0.01
SYNE2-214ENST00000554928 ZGPATQ8N5A5 531 aaKnown RBP15.12■□□□□ 0.01
SYNE2-214ENST00000554928 TMEM39BQ9GZU3 492 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 GBA2Q9HCG7 927 aaPredicted RBP15.12■□□□□ 0.01
SYNE2-214ENST00000554928 RAI14Q9P0K7 980 aa15.12■□□□□ 0.01
SYNE2-214ENST00000554928 MYO1BO43795 1136 aa15.11■□□□□ 0.01
SYNE2-214ENST00000554928 HDAC1Q13547 482 aaPredicted RBP15.11■□□□□ 0.01
SYNE2-214ENST00000554928 PRKG1Q13976 671 aa15.11■□□□□ 0.01
SYNE2-214ENST00000554928 NBPF12Q5TAG4 269 aaPredicted RBP15.11■□□□□ 0.01
SYNE2-214ENST00000554928 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
SYNE2-214ENST00000554928 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
SYNE2-214ENST00000554928 MROH7-TTC4A0A0A0MT08 1334 aa15.11■□□□□ 0.01
SYNE2-214ENST00000554928 BTDP43251 543 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 HUNKP57058 714 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 SPTY2D1Q68D10 685 aaPredicted RBP15.1■□□□□ 0.01
SYNE2-214ENST00000554928 ZFPM1Q8IX07 1006 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 DNAJC2Q99543 621 aaKnown RBP15.1■□□□□ 0.01
SYNE2-214ENST00000554928 BOLA2Q9H3K6 86 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 USP40Q9NVE5 1235 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 LRP2BPQ9P2M1 347 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 ECM29Q5VYK3 1845 aa15.1■□□□□ 0.01
SYNE2-214ENST00000554928 UBE2Q2LH0YL09 131 aa15.09■□□□□ 0.01
SYNE2-214ENST00000554928 CHGBP05060 677 aa15.09■□□□□ 0.01
SYNE2-214ENST00000554928 RHBDL3P58872 404 aa15.09■□□□□ 0.01
SYNE2-214ENST00000554928 GRM1Q13255 1194 aa15.09■□□□□ 0.01
SYNE2-214ENST00000554928 DEFB115Q30KQ5 88 aa15.09■□□□□ 0.01
SYNE2-214ENST00000554928 FAM163AQ96GL9 167 aaPredicted RBP15.09■□□□□ 0.01
SYNE2-214ENST00000554928 FAM198AQ9UFP1 575 aa15.09■□□□□ 0.01
SYNE2-214ENST00000554928 GPR75-ASB3A0A0A6YYF3 556 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 GOLIM4O00461 696 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 SLURP2P0DP57 97 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 ATP5JP18859 108 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 TCP10Q12799 353 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 SLFNL1Q499Z3 407 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 PAXIP1Q6ZW49 1069 aaPredicted RBP15.08■□□□□ 0
SYNE2-214ENST00000554928 C2orf69Q8N8R5 385 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 ZIC5Q96T25 663 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 DDX4Q9NQI0 724 aaKnown RBP15.08■□□□□ 0
SYNE2-214ENST00000554928 RFX7Q2KHR2 1363 aa15.08■□□□□ 0
SYNE2-214ENST00000554928 MYO5AQ9Y4I1 1855 aaKnown RBP15.08■□□□□ 0
SYNE2-214ENST00000554928 AOC2O75106 756 aa15.07■□□□□ 0
SYNE2-214ENST00000554928 WDHD1O75717 1129 aaPredicted RBP15.07■□□□□ 0
SYNE2-214ENST00000554928 IDH1O75874 414 aaKnown RBP15.07■□□□□ 0
SYNE2-214ENST00000554928 ANKRD45Q5TZF3 282 aa15.07■□□□□ 0
SYNE2-214ENST00000554928 NAA16Q6N069 864 aaPredicted RBP15.07■□□□□ 0
SYNE2-214ENST00000554928 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.07■□□□□ 0
SYNE2-214ENST00000554928 CAPNS2Q96L46 248 aa15.07■□□□□ 0
SYNE2-214ENST00000554928 MYH2Q9UKX2 1941 aa15.07■□□□□ 0
SYNE2-214ENST00000554928 PAPPA2Q9BXP8 1791 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 DYNLL1P63167 89 aaKnown RBP15.06■□□□□ 0
SYNE2-214ENST00000554928 TTLL12Q14166 644 aaPredicted RBP15.06■□□□□ 0
SYNE2-214ENST00000554928 SH3BP5LQ7L8J4 393 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 MAGEB6Q8N7X4 407 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 JMYQ8N9B5 988 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 SH3RF3Q8TEJ3 882 aaPredicted RBP15.06■□□□□ 0
SYNE2-214ENST00000554928 HAUS7Q99871 368 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 TMOD2Q9NZR1 351 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 PPP2R3BQ9Y5P8 575 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 SALL3Q9BXA9 1300 aa15.06■□□□□ 0
SYNE2-214ENST00000554928 WDR33Q9C0J8 1336 aaKnown RBP15.06■□□□□ 0
SYNE2-214ENST00000554928 FAM155AB1AL88 458 aaPredicted RBP15.05■□□□□ -0
SYNE2-214ENST00000554928 USP2O75604 605 aaPredicted RBP15.05■□□□□ -0
SYNE2-214ENST00000554928 CYP7A1P22680 504 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 RGS3P49796 1198 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 AAMPQ13685 434 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 TNFAIP1Q13829 316 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 FKBP1CQ5VVH2 108 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 B4GALNT3Q6L9W6 998 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 SMC5Q8IY18 1101 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 CLMNQ96JQ2 1002 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 ECHDC1Q9NTX5 307 aa15.05■□□□□ -0
SYNE2-214ENST00000554928 AATFQ9NY61 560 aaKnown RBP eCLIP15.05■□□□□ -0
SYNE2-214ENST00000554928 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.05■□□□□ -0
SYNE2-214ENST00000554928 ANGEL1Q9UNK9 670 aaKnown RBP15.05■□□□□ -0
SYNE2-214ENST00000554928 PCNTO95613 3336 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 MAST2Q6P0Q8 1798 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 MAP4K4O95819 1239 aaPredicted RBP15.04■□□□□ -0
SYNE2-214ENST00000554928 GSTO1P78417 241 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 PICALMQ13492 652 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 RGMBQ6NW40 437 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 FAM83AQ86UY5 434 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 SLF2Q8IX21 1173 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 MIGA1Q8NAN2 632 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 PI4K2BQ8TCG2 481 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 FAM151AQ8WW52 585 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 GCC1Q96CN9 775 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 IDI2Q9BXS1 227 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 LNPKQ9C0E8 428 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 RWDD1Q9H446 243 aaPredicted RBP15.04■□□□□ -0
SYNE2-214ENST00000554928 PAG1Q9NWQ8 432 aa15.04■□□□□ -0
SYNE2-214ENST00000554928 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
SYNE2-214ENST00000554928 LDHCP07864 332 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 PDE6AP16499 860 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 NF2P35240 595 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 TNNI2P48788 182 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 ZNF157P51786 506 aaPredicted RBP15.03■□□□□ -0
SYNE2-214ENST00000554928 FKBP1BP68106 108 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 SUPT20HL1Q3ZLR7 823 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 LDLRAD1Q5T700 205 aa15.03■□□□□ -0
SYNE2-214ENST00000554928 MIGA2Q7L4E1 593 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms