RNA–Protein interactions for RNA: ENST00000554673.5

ATXN3-230, Transcript of ataxin 3, humanhuman

TSL 5

Gene ATXN3, Length 981 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-230ENST00000554673 RPAP2Q8IXW5 612 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-230ENST00000554673 FAM89AQ96GI7 184 aa7.3□□□□□ -1.24
ATXN3-230ENST00000554673 ZNF594Q96JF6 807 aaPredicted RBP7.3□□□□□ -1.24
ATXN3-230ENST00000554673 IGSF5Q9NSI5 407 aa7.3□□□□□ -1.24
ATXN3-230ENST00000554673 DUOX1Q9NRD9 1551 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 DLEC1Q9Y238 1755 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 TMEM88BA6NKF7 163 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 H3BM21 787 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 SNAP23O00161 211 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 KDM4AO75164 1064 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 CSF1RP07333 972 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 USP17L8P0C7I0 530 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 UBTFL1P0CB47 393 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-230ENST00000554673 RFX1P22670 979 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 DDR1Q08345 913 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 COL9A3Q14050 684 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-230ENST00000554673 QPCTQ16769 361 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 TBC1D9BQ66K14 1250 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 DZIP3Q86Y13 1208 aaKnown RBP7.29□□□□□ -1.24
ATXN3-230ENST00000554673 PI4K2BQ8TCG2 481 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 PPP1R12CQ9BZL4 782 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 RWDD1Q9H446 243 aaPredicted RBP7.29□□□□□ -1.24
ATXN3-230ENST00000554673 IL1RAPL2Q9NP60 686 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 RBM19Q9Y4C8 960 aaKnown RBP7.29□□□□□ -1.24
ATXN3-230ENST00000554673 BRCA1P38398 1863 aaKnown RBP7.29□□□□□ -1.24
ATXN3-230ENST00000554673 KIF13BQ9NQT8 1826 aa7.29□□□□□ -1.24
ATXN3-230ENST00000554673 USP42Q9H9J4 1324 aaKnown RBP7.28□□□□□ -1.24
ATXN3-230ENST00000554673 ZNF609O15014 1411 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 A0A087WZG4 1122 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 RPS6KA4O75676 772 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 GNAI3P08754 354 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 CD46P15529 392 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 TXNRD1Q16881 649 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 LRRC24Q50LG9 513 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 ANKRD45Q5TZF3 282 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 LMBR1LQ6UX01 489 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 FAM196AQ6ZSG2 479 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 NUTM1Q86Y26 1132 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 EAF2Q96CJ1 260 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-230ENST00000554673 PLA2G12BQ9BX93 195 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 CCNL1Q9UK58 526 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-230ENST00000554673 MYH13Q9UKX3 1938 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 COL1A1P02452 1464 aaPredicted RBP7.28□□□□□ -1.24
ATXN3-230ENST00000554673 ADAMTSL1Q8N6G6 1762 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 CDK5RAP2Q96SN8 1893 aa7.28□□□□□ -1.24
ATXN3-230ENST00000554673 CDHR2Q9BYE9 1310 aa7.27□□□□□ -1.24
ATXN3-230ENST00000554673 IRS2Q9Y4H2 1338 aa7.27□□□□□ -1.24
ATXN3-230ENST00000554673 SLX4Q8IY92 1834 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 UNCXA6NJT0 531 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 ERVV-1B6SEH8 477 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 SRGAP3O43295 1099 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 STARD3NLO95772 234 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 PCCAP05165 728 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-230ENST00000554673 TM4SF1P30408 202 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 GUCA2AQ02747 115 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 WASHC4Q2M389 1173 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 USPL1Q5W0Q7 1092 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 NPAS3Q8IXF0 933 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 VGLL2Q8N8G2 317 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 CCDC191Q8NCU4 936 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 TTLL11Q8NHH1 800 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 RHPN1Q8TCX5 695 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 SMARCC1Q92922 1105 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-230ENST00000554673 CCDC85AQ96PX6 553 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-230ENST00000554673 CAMKK2Q96RR4 588 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 GREM2Q9H772 168 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 VRTNQ9H8Y1 702 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 COPRSQ9NQ92 184 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 SEC31BQ9NQW1 1179 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 CWC25Q9NXE8 425 aaPredicted RBP7.27□□□□□ -1.25
ATXN3-230ENST00000554673 STAP2Q9UGK3 403 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 GNEQ9Y223 722 aaKnown RBP7.27□□□□□ -1.25
ATXN3-230ENST00000554673 NDUFB9Q9Y6M9 179 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 PNPLA7Q6ZV29 1317 aa7.27□□□□□ -1.25
ATXN3-230ENST00000554673 SCN9AQ15858 1988 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 MOXD2PA6NHM9 499 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 AP1G2O75843 785 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 ATG7O95352 703 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 HCLS1P14317 486 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-230ENST00000554673 ADORA1P30542 326 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 PDE1AP54750 535 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 NFIXQ14938 502 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 SLFNL1Q499Z3 407 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 TTC22Q5TAA0 569 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 ZNF772Q68DY9 489 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-230ENST00000554673 DEFB132Q7Z7B7 95 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 COL23A1Q86Y22 540 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-230ENST00000554673 SYMPKQ92797 1274 aaKnown RBP7.26□□□□□ -1.25
ATXN3-230ENST00000554673 GCC1Q96CN9 775 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 EDC3Q96F86 508 aaKnown RBP7.26□□□□□ -1.25
ATXN3-230ENST00000554673 ZFP42Q96MM3 310 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 KIF2CQ99661 725 aa7.26□□□□□ -1.25
ATXN3-230ENST00000554673 TEX13AQ9BXU3 409 aaPredicted RBP7.26□□□□□ -1.25
ATXN3-230ENST00000554673 PALM3A6NDB9 673 aaPredicted RBP7.25□□□□□ -1.25
ATXN3-230ENST00000554673 DDX58O95786 925 aaKnown RBP7.25□□□□□ -1.25
ATXN3-230ENST00000554673 GYS1P13807 737 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 JUNDP17535 347 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 RXRBP28702 533 aa7.25□□□□□ -1.25
ATXN3-230ENST00000554673 EZH2Q15910 746 aaKnown RBP7.25□□□□□ -1.25
ATXN3-230ENST00000554673 ERFEQ4G0M1 354 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms