RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 CTSBP07858 339 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 TXKP42681 527 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 FKBP4Q02790 459 aaKnown RBP eCLIP6.6□□□□□ -1.35
ATXN3-227ENST00000554491 NFKBIBQ15653 356 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 MSMPQ1L6U9 139 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 ZNF423Q2M1K9 1284 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 SPRED3Q2MJR0 410 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 EXOSC6Q5RKV6 272 aaKnown RBP6.6□□□□□ -1.35
ATXN3-227ENST00000554491 ABI1Q8IZP0 508 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 OSBPL1AQ9BXW6 950 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 RNF114Q9Y508 228 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 ADAMTSL3P82987 1691 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 ABCC2Q92887 1545 aa6.6□□□□□ -1.35
ATXN3-227ENST00000554491 BTBD11A6QL63 1104 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 FOSL1P15407 271 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 GRIA4P48058 902 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 SOX4Q06945 474 aaPredicted RBP6.59□□□□□ -1.35
ATXN3-227ENST00000554491 SF3B2Q13435 895 aaKnown RBP6.59□□□□□ -1.35
ATXN3-227ENST00000554491 PAOXQ6QHF9 649 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 NFXL1Q6ZNB6 911 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 C1orf115Q9H7X2 142 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 KIAA0586Q9BVV6 1533 aa6.59□□□□□ -1.35
ATXN3-227ENST00000554491 PLB1Q6P1J6 1458 aa6.59□□□□□ -1.36
ATXN3-227ENST00000554491 ASXL2Q76L83 1435 aa6.59□□□□□ -1.36
ATXN3-227ENST00000554491 A0A096LPE4 126 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 A0A1W2PP55 124 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 A0A1W2PPZ6 126 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 MAOBP27338 520 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 PCDH1Q08174 1060 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 CCNJLQ8IV13 435 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 GIMAP7Q8NHV1 300 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 TCF12Q99081 682 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 PRKAG2Q9UGJ0 569 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 PTPRMP28827 1452 aa6.58□□□□□ -1.36
ATXN3-227ENST00000554491 FAM170BA6NMN3 283 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 PPP1R15AO75807 674 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-227ENST00000554491 ECEL1O95672 775 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 ADH5P11766 374 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 USPL1Q5W0Q7 1092 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 HOMEZQ8IX15 550 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 EZH1Q92800 747 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-227ENST00000554491 GATA6Q92908 595 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 TBC1D32Q96NH3 1257 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 CLEC4MQ9H2X3 399 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-227ENST00000554491 CCDC39Q9UFE4 941 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 ANGEL1Q9UNK9 670 aaKnown RBP6.57□□□□□ -1.36
ATXN3-227ENST00000554491 GTF3C3Q9Y5Q9 886 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 ACTL7BQ9Y614 415 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 MADDQ8WXG6 1647 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 BIVM-ERCC5R4GMW8 1640 aa6.57□□□□□ -1.36
ATXN3-227ENST00000554491 EPRSP07814 1512 aaKnown RBP6.56□□□□□ -1.36
ATXN3-227ENST00000554491 ZAR1Q86SH2 424 aa6.56□□□□□ -1.36
ATXN3-227ENST00000554491 GALNT12Q8IXK2 581 aa6.56□□□□□ -1.36
ATXN3-227ENST00000554491 LIN7BQ9HAP6 207 aa6.56□□□□□ -1.36
ATXN3-227ENST00000554491 PODXL2Q9NZ53 605 aa6.56□□□□□ -1.36
ATXN3-227ENST00000554491 MTMR7Q9Y216 660 aa6.56□□□□□ -1.36
ATXN3-227ENST00000554491 CYP26A1O43174 497 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 NFICP08651 508 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 RAB6AP20340 208 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 CPSF6Q16630 551 aaKnown RBP eCLIP6.55□□□□□ -1.36
ATXN3-227ENST00000554491 AKAP4Q5JQC9 854 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 TRIM56Q9BRZ2 755 aaKnown RBP6.55□□□□□ -1.36
ATXN3-227ENST00000554491 TIMELESSQ9UNS1 1208 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 BCORL1Q5H9F3 1711 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 CFAP43Q8NDM7 1665 aa6.55□□□□□ -1.36
ATXN3-227ENST00000554491 ZCCHC11Q5TAX3 1644 aaKnown RBP6.54□□□□□ -1.36
ATXN3-227ENST00000554491 PRNPP04156 253 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 CYP11A1P05108 521 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 COL19A1Q14993 1142 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 POU4F3Q15319 338 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 ECM1Q16610 540 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 DYMQ7RTS9 669 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 METTL22Q9BUU2 404 aaPredicted RBP6.54□□□□□ -1.36
ATXN3-227ENST00000554491 SEMA6CQ9H3T2 930 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 FAM105AQ9NUU6 356 aa6.54□□□□□ -1.36
ATXN3-227ENST00000554491 RIMS1Q86UR5 1692 aaKnown RBP6.54□□□□□ -1.36
ATXN3-227ENST00000554491 WRNQ14191 1432 aaPredicted RBP eCLIP6.53□□□□□ -1.36
ATXN3-227ENST00000554491 KRTAP4-8A0A0G2JLE6 195 aa6.53□□□□□ -1.36
ATXN3-227ENST00000554491 DYNC1LI2O43237 492 aaPredicted RBP6.53□□□□□ -1.36
ATXN3-227ENST00000554491 ICMTO60725 284 aa6.53□□□□□ -1.36
ATXN3-227ENST00000554491 VSIG10LQ86VR7 867 aa6.53□□□□□ -1.36
ATXN3-227ENST00000554491 YIPF2Q9BWQ6 316 aa6.53□□□□□ -1.36
ATXN3-227ENST00000554491 LRRC4CQ9HCJ2 640 aa6.53□□□□□ -1.36
ATXN3-227ENST00000554491 UHRF1BP1LA0JNW5 1464 aa6.53□□□□□ -1.36
ATXN3-227ENST00000554491 YBX3P16989 372 aaKnown RBP eCLIP6.52□□□□□ -1.37
ATXN3-227ENST00000554491 SERPINB4P48594 390 aa6.52□□□□□ -1.37
ATXN3-227ENST00000554491 ORC1Q13415 861 aa6.52□□□□□ -1.37
ATXN3-227ENST00000554491 ZNF765Q7L2R6 523 aa6.52□□□□□ -1.37
ATXN3-227ENST00000554491 TP53INP2Q8IXH6 220 aa6.52□□□□□ -1.37
ATXN3-227ENST00000554491 ACSS3Q9H6R3 686 aa6.52□□□□□ -1.37
ATXN3-227ENST00000554491 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
ATXN3-227ENST00000554491 AP4E1Q9UPM8 1137 aa6.52□□□□□ -1.37
ATXN3-227ENST00000554491 H3BRB1 525 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 EIF4EBP3O60516 100 aaPredicted RBP6.51□□□□□ -1.37
ATXN3-227ENST00000554491 B3GALT4O96024 378 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 KIAA0319Q5VV43 1072 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 CBLL1Q75N03 491 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 CORO1BQ9BR76 489 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 ZNF576Q9H609 170 aa6.51□□□□□ -1.37
ATXN3-227ENST00000554491 TUT1Q9H6E5 874 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms