RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 KLHDC7BQ96G42 594 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 POP1Q99575 1024 aaKnown RBP5.14□□□□□ -1.59
SLIRP-202ENST00000553981 C7orf69Q9H7B7 122 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 ELP3Q9H9T3 547 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 GOLGA2P5Q9HBQ8 144 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 TMEM63CQ9P1W3 806 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 IQGAP1P46940 1657 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 CEP152O94986 1710 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 UBR1Q8IWV7 1749 aa5.14□□□□□ -1.59
SLIRP-202ENST00000553981 HMX2A2RU54 273 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 TOM1O60784 492 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 PTPRAP18433 802 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 PDE12Q6L8Q7 609 aaKnown RBP5.13□□□□□ -1.59
SLIRP-202ENST00000553981 NUDT16Q96DE0 195 aaKnown RBP5.13□□□□□ -1.59
SLIRP-202ENST00000553981 MYRFLQ96LU7 910 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 ADAM19Q9H013 955 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 SEC31BQ9NQW1 1179 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 CNTN3Q9P232 1028 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 SLAIN2Q9P270 581 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 KANSL3Q9P2N6 904 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.13□□□□□ -1.59
SLIRP-202ENST00000553981 SETD1AO15047 1707 aaKnown RBP5.13□□□□□ -1.59
SLIRP-202ENST00000553981 ERVK-7P63135 1459 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 CCDC141Q6ZP82 1450 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 PLEKHH2Q8IVE3 1493 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 ARHGAP23Q9P227 1491 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 EHBP1L1Q8N3D4 1523 aa5.13□□□□□ -1.59
SLIRP-202ENST00000553981 RNF17Q9BXT8 1623 aaKnown RBP5.12□□□□□ -1.59
SLIRP-202ENST00000553981 ACPPP15309 386 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 RNF43Q68DV7 783 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 ATCAYQ86WG3 371 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 ANKLE2Q86XL3 938 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 SALL4Q9UJQ4 1053 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 OAS3Q9Y6K5 1087 aaKnown RBP5.12□□□□□ -1.59
SLIRP-202ENST00000553981 MTUS2Q5JR59 1369 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 MAP3K1Q13233 1512 aa5.12□□□□□ -1.59
SLIRP-202ENST00000553981 PRR19A6NJB7 356 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 FAM177BA6PVY3 158 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 H3BRJ5 948 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 PAX4O43316 350 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 ADAMTS4O75173 837 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 SPINK2P20155 84 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 IRAK1P51617 712 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 GP2P55259 537 aaKnown RBP5.11□□□□□ -1.59
SLIRP-202ENST00000553981 ZNF438Q7Z4V0 828 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 CLEC10AQ8IUN9 316 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 FAM20CQ8IXL6 584 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 WNT8BQ93098 351 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 DBNDD2Q9BQY9 259 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 ZMYND15Q9H091 742 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 SEPT3Q9UH03 358 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 WASHC2CQ9Y4E1 1318 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 NLRP1Q9C000 1473 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 ARHGEF5Q12774 1597 aa5.11□□□□□ -1.59
SLIRP-202ENST00000553981 NFKBIEO00221 500 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 PIK3C2BO00750 1634 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 TET3O43151 1660 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 SLIT1O75093 1534 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 BMP3P12645 472 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 ATP2B4P23634 1241 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 GRIK1P39086 918 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 PREPP48147 710 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 CABP4P57796 275 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 INTS5Q6P9B9 1019 aaKnown RBP5.1□□□□□ -1.59
SLIRP-202ENST00000553981 XKR5Q6UX68 686 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.1□□□□□ -1.59
SLIRP-202ENST00000553981 THEMISQ8N1K5 641 aaPredicted RBP5.1□□□□□ -1.59
SLIRP-202ENST00000553981 C1orf127Q8N9H9 656 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 ARID1BQ8NFD5 2236 aaPredicted RBP5.1□□□□□ -1.59
SLIRP-202ENST00000553981 FAM83CQ9BQN1 747 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 KRTAP9-9Q9BYP9 154 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 KRTAP9-4Q9BYQ2 154 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 OSGEPQ9NPF4 335 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 MAST1Q9Y2H9 1570 aa5.1□□□□□ -1.59
SLIRP-202ENST00000553981 SYNMO15061 1565 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 FAM135AQ9P2D6 1515 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 LOC105371045A0A1W2PR82 267 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 SART1O43290 800 aaKnown RBP5.09□□□□□ -1.59
SLIRP-202ENST00000553981 TRPA1O75762 1119 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 TAL1P17542 331 aaPredicted RBP5.09□□□□□ -1.59
SLIRP-202ENST00000553981 CES1P23141 567 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 NLRP12P59046 1061 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 ANKRD34AQ69YU3 496 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 BEND4Q6ZU67 534 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 DTX1Q86Y01 620 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 SHKBP1Q8TBC3 707 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 EDEM1Q92611 657 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 HHIPQ96QV1 700 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 RNF208Q9H0X6 261 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 GGNBP2Q9H3C7 697 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 DZANK1Q9NVP4 752 aa5.09□□□□□ -1.59
SLIRP-202ENST00000553981 ROBO1Q9Y6N7 1651 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 LRP6O75581 1613 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 SCAF11Q99590 1463 aaKnown RBP5.08□□□□□ -1.6
SLIRP-202ENST00000553981 FAM135BQ49AJ0 1406 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 A6NHS1 94 aa5.08□□□□□ -1.6
SLIRP-202ENST00000553981 PDE2AO00408 941 aaPredicted RBP5.08□□□□□ -1.6
SLIRP-202ENST00000553981 RPLP1P05386 114 aaKnown RBP5.08□□□□□ -1.6
SLIRP-202ENST00000553981 DNM1Q05193 864 aaKnown RBP5.08□□□□□ -1.6
SLIRP-202ENST00000553981 IDI1Q13907 227 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms