RNA–Protein interactions for RNA: ENST00000553945.1

NEK9-203, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 786 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-203ENST00000553945 FAM163AQ96GL9 167 aaPredicted RBP28.4■■■□□ 2.14
NEK9-203ENST00000553945 HHIPL1Q96JK4 782 aa28.4■■■□□ 2.14
NEK9-203ENST00000553945 PIH1D3Q9NQM4 214 aaKnown RBP28.4■■■□□ 2.14
NEK9-203ENST00000553945 WDR33Q9C0J8 1336 aaKnown RBP28.4■■■□□ 2.14
NEK9-203ENST00000553945 LDHCP07864 332 aa28.39■■■□□ 2.14
NEK9-203ENST00000553945 SUPT20HL1Q3ZLR7 823 aa28.39■■■□□ 2.14
NEK9-203ENST00000553945 NBPF12Q5TAG4 269 aaPredicted RBP28.39■■■□□ 2.14
NEK9-203ENST00000553945 MYO5AQ9Y4I1 1855 aaKnown RBP28.38■■■□□ 2.13
NEK9-203ENST00000553945 MAST2Q6P0Q8 1798 aa28.38■■■□□ 2.13
NEK9-203ENST00000553945 UBE2Q2LH0YL09 131 aa28.38■■■□□ 2.13
NEK9-203ENST00000553945 IRX6P78412 446 aaPredicted RBP28.38■■■□□ 2.13
NEK9-203ENST00000553945 FKBP1CQ5VVH2 108 aa28.38■■■□□ 2.13
NEK9-203ENST00000553945 TMEM39BQ9GZU3 492 aa28.38■■■□□ 2.13
NEK9-203ENST00000553945 BTDP43251 543 aa28.37■■■□□ 2.13
NEK9-203ENST00000553945 SSC5DA1L4H1 1573 aa28.37■■■□□ 2.13
NEK9-203ENST00000553945 HDAC1Q13547 482 aaPredicted RBP28.36■■■□□ 2.13
NEK9-203ENST00000553945 NAA16Q6N069 864 aaPredicted RBP28.36■■■□□ 2.13
NEK9-203ENST00000553945 RGMBQ6NW40 437 aa28.36■■■□□ 2.13
NEK9-203ENST00000553945 ARMC9Q7Z3E5 817 aa28.36■■■□□ 2.13
NEK9-203ENST00000553945 FAM83AQ86UY5 434 aa28.36■■■□□ 2.13
NEK9-203ENST00000553945 FZD1Q9UP38 647 aa28.36■■■□□ 2.13
NEK9-203ENST00000553945 IDH1O75874 414 aaKnown RBP28.35■■■□□ 2.13
NEK9-203ENST00000553945 CDAN1Q8IWY9 1227 aa28.35■■■□□ 2.13
NEK9-203ENST00000553945 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.35■■■□□ 2.13
NEK9-203ENST00000553945 TEPSINQ96N21 525 aa28.35■■■□□ 2.13
NEK9-203ENST00000553945 DNAJC2Q99543 621 aaKnown RBP28.35■■■□□ 2.13
NEK9-203ENST00000553945 ANTXR1Q9H6X2 564 aa28.35■■■□□ 2.13
NEK9-203ENST00000553945 ANGEL1Q9UNK9 670 aaKnown RBP28.35■■■□□ 2.13
NEK9-203ENST00000553945 GPR75-ASB3A0A0A6YYF3 556 aa28.34■■■□□ 2.13
NEK9-203ENST00000553945 ZNF157P51786 506 aaPredicted RBP28.34■■■□□ 2.13
NEK9-203ENST00000553945 TCP10Q12799 353 aa28.34■■■□□ 2.13
NEK9-203ENST00000553945 PPP1R12BO60237 982 aaPredicted RBP28.33■■■□□ 2.13
NEK9-203ENST00000553945 ATP5JP18859 108 aa28.33■■■□□ 2.13
NEK9-203ENST00000553945 NFIAQ12857 509 aa28.33■■■□□ 2.13
NEK9-203ENST00000553945 BOLA2Q9H3K6 86 aa28.33■■■□□ 2.13
NEK9-203ENST00000553945 AOC2O75106 756 aa28.32■■■□□ 2.12
NEK9-203ENST00000553945 FAM151AQ8WW52 585 aa28.32■■■□□ 2.12
NEK9-203ENST00000553945 NOL10Q9BSC4 688 aaKnown RBP28.32■■■□□ 2.12
NEK9-203ENST00000553945 FAM198AQ9UFP1 575 aa28.32■■■□□ 2.12
NEK9-203ENST00000553945 DOCK2Q92608 1830 aa28.32■■■□□ 2.12
NEK9-203ENST00000553945 GOLIM4O00461 696 aa28.31■■■□□ 2.12
NEK9-203ENST00000553945 IGSF3O75054 1194 aa28.31■■■□□ 2.12
NEK9-203ENST00000553945 TTF1Q15361 905 aaPredicted RBP28.31■■■□□ 2.12
NEK9-203ENST00000553945 GCC1Q96CN9 775 aa28.31■■■□□ 2.12
NEK9-203ENST00000553945 RWDD1Q9H446 243 aaPredicted RBP28.31■■■□□ 2.12
NEK9-203ENST00000553945 ZBTB47Q9UFB7 747 aaPredicted RBP28.31■■■□□ 2.12
NEK9-203ENST00000553945 RGS3P49796 1198 aa28.3■■■□□ 2.12
NEK9-203ENST00000553945 MAP3K12Q12852 859 aa28.3■■■□□ 2.12
NEK9-203ENST00000553945 CCDC102AQ96A19 550 aa28.3■■■□□ 2.12
NEK9-203ENST00000553945 GPATCH3Q96I76 525 aa28.3■■■□□ 2.12
NEK9-203ENST00000553945 ECHDC1Q9NTX5 307 aa28.3■■■□□ 2.12
NEK9-203ENST00000553945 CYP7A1P22680 504 aa28.29■■■□□ 2.12
NEK9-203ENST00000553945 RHBDL3P58872 404 aa28.29■■■□□ 2.12
NEK9-203ENST00000553945 ANKRD45Q5TZF3 282 aa28.29■■■□□ 2.12
NEK9-203ENST00000553945 MAGEB6Q8N7X4 407 aa28.29■■■□□ 2.12
NEK9-203ENST00000553945 IDI2Q9BXS1 227 aa28.29■■■□□ 2.12
NEK9-203ENST00000553945 THSD7BQ9C0I4 1608 aa28.29■■■□□ 2.12
NEK9-203ENST00000553945 USP2O75604 605 aaPredicted RBP28.28■■■□□ 2.12
NEK9-203ENST00000553945 WDHD1O75717 1129 aaPredicted RBP28.28■■■□□ 2.12
NEK9-203ENST00000553945 BAG3O95817 575 aa28.28■■■□□ 2.12
NEK9-203ENST00000553945 ADGRA1Q86SQ6 560 aa28.28■■■□□ 2.12
NEK9-203ENST00000553945 EDC3Q96F86 508 aaKnown RBP28.28■■■□□ 2.12
NEK9-203ENST00000553945 HAUS7Q99871 368 aa28.28■■■□□ 2.12
NEK9-203ENST00000553945 PAG1Q9NWQ8 432 aa28.28■■■□□ 2.12
NEK9-203ENST00000553945 AATFQ9NY61 560 aaKnown RBP eCLIP28.28■■■□□ 2.12
NEK9-203ENST00000553945 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.28■■■□□ 2.12
NEK9-203ENST00000553945 AK9Q5TCS8 1911 aa28.28■■■□□ 2.12
NEK9-203ENST00000553945 RPAP1Q9BWH6 1393 aaPredicted RBP28.27■■■□□ 2.12
NEK9-203ENST00000553945 FAM155AB1AL88 458 aaPredicted RBP28.27■■■□□ 2.12
NEK9-203ENST00000553945 SLC10A3P09131 477 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 IREB2P48200 963 aaKnown RBP28.27■■■□□ 2.12
NEK9-203ENST00000553945 NOGQ13253 232 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 PICALMQ13492 652 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 MAP3K11Q16584 847 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 LDLRAD1Q5T700 205 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 ZFPM1Q8IX07 1006 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 HOOK2Q96ED9 719 aa28.27■■■□□ 2.12
NEK9-203ENST00000553945 RFX7Q2KHR2 1363 aa28.26■■■□□ 2.12
NEK9-203ENST00000553945 ENTPD3O75355 529 aa28.26■■■□□ 2.11
NEK9-203ENST00000553945 MAP4K4O95819 1239 aaPredicted RBP28.26■■■□□ 2.11
NEK9-203ENST00000553945 MAP2K2P36507 400 aa28.26■■■□□ 2.11
NEK9-203ENST00000553945 TSHZ3Q63HK5 1081 aa28.26■■■□□ 2.11
NEK9-203ENST00000553945 RASAL3Q86YV0 1011 aa28.26■■■□□ 2.11
NEK9-203ENST00000553945 TEX11Q8IYF3 940 aa28.26■■■□□ 2.11
NEK9-203ENST00000553945 SH3RF3Q8TEJ3 882 aaPredicted RBP28.26■■■□□ 2.11
NEK9-203ENST00000553945 DDX4Q9NQI0 724 aaKnown RBP28.26■■■□□ 2.11
NEK9-203ENST00000553945 IGHDP01880 384 aa28.24■■■□□ 2.11
NEK9-203ENST00000553945 HSPA1AP0DMV8 641 aaKnown RBP28.24■■■□□ 2.11
NEK9-203ENST00000553945 HSPA1BP0DMV9 641 aaKnown RBP28.24■■■□□ 2.11
NEK9-203ENST00000553945 PLCG2P16885 1265 aa28.24■■■□□ 2.11
NEK9-203ENST00000553945 PPP4CP60510 307 aa28.24■■■□□ 2.11
NEK9-203ENST00000553945 ZSCAN29Q8IWY8 852 aaPredicted RBP28.24■■■□□ 2.11
NEK9-203ENST00000553945 SLC9C2Q5TAH2 1124 aa28.23■■■□□ 2.11
NEK9-203ENST00000553945 TMED8Q6PL24 325 aaPredicted RBP28.23■■■□□ 2.11
NEK9-203ENST00000553945 OTUD7AQ8TE49 926 aaPredicted RBP28.23■■■□□ 2.11
NEK9-203ENST00000553945 SLC10A4Q96EP9 437 aa28.23■■■□□ 2.11
NEK9-203ENST00000553945 CLMNQ96JQ2 1002 aa28.23■■■□□ 2.11
NEK9-203ENST00000553945 ZIC5Q96T25 663 aa28.23■■■□□ 2.11
NEK9-203ENST00000553945 PDE6AP16499 860 aa28.22■■■□□ 2.11
NEK9-203ENST00000553945 DYNLL1P63167 89 aaKnown RBP28.22■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms