RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 PNMA6EA0A0J9YXQ4 647 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 MYO1BO43795 1136 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 RBM5P52756 815 aaKnown RBP eCLIP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 FKBP1AP62942 108 aaKnown RBP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 CHAF1AQ13111 956 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 DACT2Q5SW24 774 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 MAP1SQ66K74 1059 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 GPR153Q6NV75 609 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 CDC37L1Q7L3B6 337 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 ATG9AQ7Z3C6 839 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 SAMD7Q7Z3H4 446 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 KIAA0825Q8IV33 1275 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 RPAP2Q8IXW5 612 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 VGLL2Q8N8G2 317 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 TDRD7Q8NHU6 1098 aaKnown RBP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 FAM84BQ96KN1 310 aaPredicted RBP10.27□□□□□ -0.77
PSEN1-209ENST00000553855 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 MYOZ2Q9NPC6 264 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 PCDHGA4Q9Y5G9 962 aa10.27□□□□□ -0.77
PSEN1-209ENST00000553855 FGFR2P21802 821 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 BCAMP50895 628 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 TFCP2Q12800 502 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 DLGAP5Q15398 846 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 MFSD14BQ5SR56 506 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 FBXO33Q7Z6M2 555 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 ERC1Q8IUD2 1116 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 SULF1Q8IWU6 871 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 TRPM4Q8TD43 1214 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 SSH3Q8TE77 659 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 PHOX2BQ99453 314 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 FAM205AQ6ZU69 1335 aa10.26□□□□□ -0.77
PSEN1-209ENST00000553855 ZNF609O15014 1411 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 F8W031 263 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-209ENST00000553855 RRP1P56182 461 aaKnown RBP10.25□□□□□ -0.77
PSEN1-209ENST00000553855 ZNF280AP59817 542 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-209ENST00000553855 CEP85Q6P2H3 762 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 KRT26Q7Z3Y9 468 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 WDR66Q8TBY9 1149 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 KHSRPQ92945 711 aaKnown RBP eCLIP10.25□□□□□ -0.77
PSEN1-209ENST00000553855 MXD3Q9BW11 206 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 DENND2AQ9ULE3 1009 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 IQSEC3Q9UPP2 1182 aaPredicted RBP10.25□□□□□ -0.77
PSEN1-209ENST00000553855 JAG2Q9Y219 1238 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 MAST3O60307 1309 aa10.25□□□□□ -0.77
PSEN1-209ENST00000553855 A0A1B0GUL7 405 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 SHTN1A0MZ66 631 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 FAM205CA6NFA0 338 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 TMEM88BA6NKF7 163 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 SSTR3P32745 418 aaPredicted RBP10.24□□□□□ -0.77
PSEN1-209ENST00000553855 SCARF1Q14162 830 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 CCDC158Q5M9N0 1113 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 ZGPATQ8N5A5 531 aaKnown RBP10.24□□□□□ -0.77
PSEN1-209ENST00000553855 GMLQ99445 158 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 ZBTB40Q9NUA8 1239 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 GGA3Q9NZ52 723 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 ABT1Q9ULW3 272 aaKnown RBP10.24□□□□□ -0.77
PSEN1-209ENST00000553855 TTF2Q9UNY4 1162 aaKnown RBP10.24□□□□□ -0.77
PSEN1-209ENST00000553855 IRS2Q9Y4H2 1338 aa10.24□□□□□ -0.77
PSEN1-209ENST00000553855 NUDT7P0C024 238 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 UQCRFS1P1P0C7P4 283 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 NF2P35240 595 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 HIRAP54198 1017 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-209ENST00000553855 TIMM10P62072 90 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 ANGEL2Q5VTE6 544 aaKnown RBP10.23□□□□□ -0.77
PSEN1-209ENST00000553855 USP48Q86UV5 1035 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 XAGE2Q96GT9 111 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 GLIS2Q9BZE0 524 aaPredicted RBP10.23□□□□□ -0.77
PSEN1-209ENST00000553855 ZNF408Q9H9D4 720 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 GPR108Q9NPR9 543 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 PGAP2Q9UHJ9 254 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 SUGT1Q9Y2Z0 365 aa10.23□□□□□ -0.77
PSEN1-209ENST00000553855 RAB11FIP3O75154 756 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 ITGBL1O95965 494 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 OATP04181 439 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 SKIV2LQ15477 1246 aaKnown RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 CFAP100Q494V2 611 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 TTC39AQ5SRH9 613 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 C20orf194Q5TEA3 1177 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 SPTY2D1Q68D10 685 aaPredicted RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 CCDC102BQ68D86 513 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 METTL3Q86U44 580 aaKnown RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 APOBEC3FQ8IUX4 373 aaKnown RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 SLF2Q8IX21 1173 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 CLASRPQ8N2M8 674 aaKnown RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 TMOD2Q9NZR1 351 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 SERPINA10Q9UK55 444 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 NOP58Q9Y2X3 529 aaKnown RBP10.22□□□□□ -0.77
PSEN1-209ENST00000553855 PASKQ96RG2 1323 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 PITPNM2Q9BZ72 1349 aa10.22□□□□□ -0.77
PSEN1-209ENST00000553855 A6NJR5 290 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 APBB1O00213 710 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 WNT10BO00744 389 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 CELF2O95319 508 aaKnown RBP10.21□□□□□ -0.77
PSEN1-209ENST00000553855 LDHBP07195 334 aaKnown RBP10.21□□□□□ -0.77
PSEN1-209ENST00000553855 PHKA1P46020 1223 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 HDLBPQ00341 1268 aaKnown RBP10.21□□□□□ -0.77
PSEN1-209ENST00000553855 TNFAIP1Q13829 316 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 TNNI3KQ59H18 835 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 CERS5Q8N5B7 392 aa10.21□□□□□ -0.77
PSEN1-209ENST00000553855 C2orf69Q8N8R5 385 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms