RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 VGLL4Q14135 290 aa19.72■□□□□ 0.75
ACTN1-209ENST00000553659 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.72■□□□□ 0.75
ACTN1-209ENST00000553659 TEKT1Q969V4 418 aa19.72■□□□□ 0.75
ACTN1-209ENST00000553659 CSADQ9Y600 493 aa19.72■□□□□ 0.75
ACTN1-209ENST00000553659 KIAA0100Q14667 2235 aaKnown RBP19.71■□□□□ 0.75
ACTN1-209ENST00000553659 PDE4AP27815 886 aa19.71■□□□□ 0.75
ACTN1-209ENST00000553659 CNKSR2Q8WXI2 1034 aa19.71■□□□□ 0.75
ACTN1-209ENST00000553659 BRI3BPQ8WY22 251 aa19.71■□□□□ 0.75
ACTN1-209ENST00000553659 BACH2Q9BYV9 841 aa19.71■□□□□ 0.75
ACTN1-209ENST00000553659 CCL15-CCL14A0A0B4J2E2 113 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 POTEFA5A3E0 1075 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 BCAMP50895 628 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 CCL15Q16663 113 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 ARMC5Q96C12 935 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 ZDHHC15Q96MV8 337 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 ZFYVE28Q9HCC9 887 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 SUGT1Q9Y2Z0 365 aa19.7■□□□□ 0.74
ACTN1-209ENST00000553659 AK9Q5TCS8 1911 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 CACNB3P54284 484 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 CAP1Q01518 475 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 TAF1CQ15572 869 aaPredicted RBP19.69■□□□□ 0.74
ACTN1-209ENST00000553659 FAM83AQ86UY5 434 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 KLHDC4Q8TBB5 520 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 OTUD5Q96G74 571 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 USP44Q9H0E7 712 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 TMOD2Q9NZR1 351 aa19.69■□□□□ 0.74
ACTN1-209ENST00000553659 SPDYE5A6NIY4 337 aa19.68■□□□□ 0.74
ACTN1-209ENST00000553659 ZBTB7BO15156 539 aaPredicted RBP19.68■□□□□ 0.74
ACTN1-209ENST00000553659 FGFR2P21802 821 aa19.68■□□□□ 0.74
ACTN1-209ENST00000553659 ARHGEF6Q15052 776 aa19.68■□□□□ 0.74
ACTN1-209ENST00000553659 FKBP1CQ5VVH2 108 aa19.68■□□□□ 0.74
ACTN1-209ENST00000553659 HOOK2Q96ED9 719 aa19.68■□□□□ 0.74
ACTN1-209ENST00000553659 MAST3O60307 1309 aa19.68■□□□□ 0.74
ACTN1-209ENST00000553659 IFIT1P09914 478 aaKnown RBP19.67■□□□□ 0.74
ACTN1-209ENST00000553659 ANP32AP39687 249 aaKnown RBP19.67■□□□□ 0.74
ACTN1-209ENST00000553659 PUM3Q15397 648 aaKnown RBP19.67■□□□□ 0.74
ACTN1-209ENST00000553659 APOBEC3HQ6NTF7 200 aaKnown RBP19.67■□□□□ 0.74
ACTN1-209ENST00000553659 HHIPL2Q6UWX4 724 aa19.67■□□□□ 0.74
ACTN1-209ENST00000553659 FAM43AQ8N2R8 423 aa19.67■□□□□ 0.74
ACTN1-209ENST00000553659 ERO1BQ86YB8 467 aa19.66■□□□□ 0.74
ACTN1-209ENST00000553659 GCC1Q96CN9 775 aa19.66■□□□□ 0.74
ACTN1-209ENST00000553659 SNCAIPQ9Y6H5 919 aa19.66■□□□□ 0.74
ACTN1-209ENST00000553659 WDHD1O75717 1129 aaPredicted RBP19.65■□□□□ 0.74
ACTN1-209ENST00000553659 CETPP11597 493 aa19.65■□□□□ 0.74
ACTN1-209ENST00000553659 WRNIP1Q96S55 665 aa19.65■□□□□ 0.74
ACTN1-209ENST00000553659 ZCCHC17Q9NP64 241 aaKnown RBP19.65■□□□□ 0.74
ACTN1-209ENST00000553659 EYA2O00167 538 aa19.64■□□□□ 0.73
ACTN1-209ENST00000553659 EN2P19622 333 aaPredicted RBP19.64■□□□□ 0.73
ACTN1-209ENST00000553659 RFX5P48382 616 aaPredicted RBP19.64■□□□□ 0.73
ACTN1-209ENST00000553659 DCAF15Q66K64 600 aa19.64■□□□□ 0.73
ACTN1-209ENST00000553659 NBPF11Q86T75 865 aa19.64■□□□□ 0.73
ACTN1-209ENST00000553659 SMC5Q8IY18 1101 aa19.64■□□□□ 0.73
ACTN1-209ENST00000553659 WDR66Q8TBY9 1149 aa19.64■□□□□ 0.73
ACTN1-209ENST00000553659 ZKSCAN4Q969J2 545 aaPredicted RBP19.64■□□□□ 0.73
ACTN1-209ENST00000553659 HTTP42858 3142 aa19.64■□□□□ 0.73
ACTN1-209ENST00000553659 RPAP1Q9BWH6 1393 aaPredicted RBP19.63■□□□□ 0.73
ACTN1-209ENST00000553659 IRF6O14896 467 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 TLR2O60603 784 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 SLC5A1P13866 664 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 RGS3P49796 1198 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 SNAPC2Q13487 334 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 LPIN2Q92539 896 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 ZNF333Q96JL9 665 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 TMEM106CQ9BVX2 250 aa19.63■□□□□ 0.73
ACTN1-209ENST00000553659 BTBD19C9JJ37 291 aa19.62■□□□□ 0.73
ACTN1-209ENST00000553659 PPIL2Q13356 520 aa19.62■□□□□ 0.73
ACTN1-209ENST00000553659 SLC9C1Q4G0N8 1177 aa19.62■□□□□ 0.73
ACTN1-209ENST00000553659 ZNF341Q9BYN7 854 aa19.62■□□□□ 0.73
ACTN1-209ENST00000553659 PTCH2Q9Y6C5 1203 aa19.62■□□□□ 0.73
ACTN1-209ENST00000553659 ZSWIM8A7E2V4 1837 aa19.61■□□□□ 0.73
ACTN1-209ENST00000553659 KIF22Q14807 665 aa19.61■□□□□ 0.73
ACTN1-209ENST00000553659 MIGA2Q7L4E1 593 aa19.61■□□□□ 0.73
ACTN1-209ENST00000553659 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
ACTN1-209ENST00000553659 LACTBP83111 547 aaPredicted RBP19.6■□□□□ 0.73
ACTN1-209ENST00000553659 PPATQ06203 517 aa19.6■□□□□ 0.73
ACTN1-209ENST00000553659 ATG9AQ7Z3C6 839 aa19.6■□□□□ 0.73
ACTN1-209ENST00000553659 FBXO3Q9UK99 471 aa19.6■□□□□ 0.73
ACTN1-209ENST00000553659 CENPFP49454 3210 aa19.59■□□□□ 0.73
ACTN1-209ENST00000553659 GNRH1P01148 92 aa19.59■□□□□ 0.73
ACTN1-209ENST00000553659 RPAP2Q8IXW5 612 aaPredicted RBP19.59■□□□□ 0.73
ACTN1-209ENST00000553659 ZNF112Q9UJU3 913 aa19.59■□□□□ 0.73
ACTN1-209ENST00000553659 DAGLAQ9Y4D2 1042 aa19.59■□□□□ 0.73
ACTN1-209ENST00000553659 MYH2Q9UKX2 1941 aa19.59■□□□□ 0.73
ACTN1-209ENST00000553659 INPP5BP32019 993 aa19.58■□□□□ 0.72
ACTN1-209ENST00000553659 CDC42EP5Q6NZY7 148 aa19.58■□□□□ 0.72
ACTN1-209ENST00000553659 ARHGAP39Q9C0H5 1083 aa19.58■□□□□ 0.72
ACTN1-209ENST00000553659 CIAO1O76071 339 aa19.57■□□□□ 0.72
ACTN1-209ENST00000553659 TCP10Q12799 353 aa19.57■□□□□ 0.72
ACTN1-209ENST00000553659 SLC4A8Q2Y0W8 1093 aa19.57■□□□□ 0.72
ACTN1-209ENST00000553659 GNL3LQ9NVN8 582 aaKnown RBP19.57■□□□□ 0.72
ACTN1-209ENST00000553659 CEP126Q9P2H0 1117 aa19.57■□□□□ 0.72
ACTN1-209ENST00000553659 LDHBP07195 334 aaKnown RBP19.56■□□□□ 0.72
ACTN1-209ENST00000553659 UBTFL1P0CB47 393 aaPredicted RBP19.56■□□□□ 0.72
ACTN1-209ENST00000553659 PRDX5P30044 214 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 PRMT2P55345 433 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 DIXDC1Q155Q3 683 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 ATP2B3Q16720 1220 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 HABP4Q5JVS0 413 aaKnown RBP19.56■□□□□ 0.72
ACTN1-209ENST00000553659 C17orf99Q6UX52 265 aa19.56■□□□□ 0.72
ACTN1-209ENST00000553659 ANKRD23Q86SG2 305 aa19.56■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms