RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 MOGSQ13724 837 aa17.88■□□□□ 0.45
NEDD1-205ENST00000553609 CAVIN4Q5BKX8 364 aa17.88■□□□□ 0.45
NEDD1-205ENST00000553609 HHIPL2Q6UWX4 724 aa17.88■□□□□ 0.45
NEDD1-205ENST00000553609 KLHDC4Q8TBB5 520 aa17.88■□□□□ 0.45
NEDD1-205ENST00000553609 SUGT1Q9Y2Z0 365 aa17.88■□□□□ 0.45
NEDD1-205ENST00000553609 INPP5BP32019 993 aa17.87■□□□□ 0.45
NEDD1-205ENST00000553609 PPATQ06203 517 aa17.87■□□□□ 0.45
NEDD1-205ENST00000553609 MTFR1Q15390 333 aa17.87■□□□□ 0.45
NEDD1-205ENST00000553609 TRIM47Q96LD4 638 aa17.87■□□□□ 0.45
NEDD1-205ENST00000553609 TMOD2Q9NZR1 351 aa17.87■□□□□ 0.45
NEDD1-205ENST00000553609 ZNF112Q9UJU3 913 aa17.87■□□□□ 0.45
NEDD1-205ENST00000553609 FRAT2O75474 233 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-205ENST00000553609 WDHD1O75717 1129 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-205ENST00000553609 PRMT2P55345 433 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 KIF22Q14807 665 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 DCAF15Q66K64 600 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 MIGA2Q7L4E1 593 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.86■□□□□ 0.45
NEDD1-205ENST00000553609 HOOK2Q96ED9 719 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 ZNF341Q9BYN7 854 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 CPA4Q9UI42 421 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 KCNH4Q9UQ05 1017 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 MAST3O60307 1309 aa17.86■□□□□ 0.45
NEDD1-205ENST00000553609 UBE2Q1Q7Z7E8 422 aa17.85■□□□□ 0.45
NEDD1-205ENST00000553609 ANKRD23Q86SG2 305 aa17.85■□□□□ 0.45
NEDD1-205ENST00000553609 ZNF521Q96K83 1311 aa17.85■□□□□ 0.45
NEDD1-205ENST00000553609 SRRDQ9UH36 339 aa17.85■□□□□ 0.45
NEDD1-205ENST00000553609 RFX5P48382 616 aaPredicted RBP17.84■□□□□ 0.45
NEDD1-205ENST00000553609 NFIAQ12857 509 aa17.84■□□□□ 0.45
NEDD1-205ENST00000553609 PUM3Q15397 648 aaKnown RBP17.84■□□□□ 0.45
NEDD1-205ENST00000553609 MRPL50Q8N5N7 158 aaKnown RBP17.84■□□□□ 0.45
NEDD1-205ENST00000553609 FAM151AQ8WW52 585 aa17.84■□□□□ 0.45
NEDD1-205ENST00000553609 DAGLAQ9Y4D2 1042 aa17.84■□□□□ 0.45
NEDD1-205ENST00000553609 ATRNL1Q5VV63 1379 aa17.83■□□□□ 0.45
NEDD1-205ENST00000553609 PDHXO00330 501 aa17.83■□□□□ 0.44
NEDD1-205ENST00000553609 ECM2O94769 699 aaPredicted RBP17.83■□□□□ 0.44
NEDD1-205ENST00000553609 OSBPP22059 807 aa17.83■□□□□ 0.44
NEDD1-205ENST00000553609 PSMC4P43686 418 aa17.83■□□□□ 0.44
NEDD1-205ENST00000553609 NOL9Q5SY16 702 aaKnown RBP17.83■□□□□ 0.44
NEDD1-205ENST00000553609 USP44Q9H0E7 712 aa17.83■□□□□ 0.44
NEDD1-205ENST00000553609 IFIT1P09914 478 aaKnown RBP17.82■□□□□ 0.44
NEDD1-205ENST00000553609 BCRP11274 1271 aa17.82■□□□□ 0.44
NEDD1-205ENST00000553609 DIXDC1Q155Q3 683 aa17.82■□□□□ 0.44
NEDD1-205ENST00000553609 CDC42EP5Q6NZY7 148 aa17.82■□□□□ 0.44
NEDD1-205ENST00000553609 FAM198AQ9UFP1 575 aa17.82■□□□□ 0.44
NEDD1-205ENST00000553609 LAMA3Q16787 3333 aa17.82■□□□□ 0.44
NEDD1-205ENST00000553609 PRDX5P30044 214 aa17.81■□□□□ 0.44
NEDD1-205ENST00000553609 HOXD11P31277 338 aaPredicted RBP17.81■□□□□ 0.44
NEDD1-205ENST00000553609 GRK4P32298 578 aa17.81■□□□□ 0.44
NEDD1-205ENST00000553609 GPAT2Q6NUI2 795 aa17.81■□□□□ 0.44
NEDD1-205ENST00000553609 WDR66Q8TBY9 1149 aa17.81■□□□□ 0.44
NEDD1-205ENST00000553609 EYA2O00167 538 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 GJA8P48165 433 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 TCP10Q12799 353 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 CHRDL2Q6WN34 429 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 ATG9AQ7Z3C6 839 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 LPIN2Q92539 896 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 PRO3102Q9H379 93 aa17.8■□□□□ 0.44
NEDD1-205ENST00000553609 RFX7Q2KHR2 1363 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 PTPRCP08575 1304 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 MYPNQ86TC9 1320 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 MYH13Q9UKX3 1938 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 GJB1P08034 283 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 CCL5P13501 91 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 PRKCZQ05513 592 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 ZFPM1Q8IX07 1006 aa17.79■□□□□ 0.44
NEDD1-205ENST00000553609 PHF20L1A8MW92 1017 aa17.78■□□□□ 0.44
NEDD1-205ENST00000553609 FMNL1O95466 1100 aaPredicted RBP17.78■□□□□ 0.44
NEDD1-205ENST00000553609 CYP2C8P10632 490 aa17.78■□□□□ 0.44
NEDD1-205ENST00000553609 SLC5A1P13866 664 aa17.78■□□□□ 0.44
NEDD1-205ENST00000553609 RAET1EQ8TD07 263 aa17.78■□□□□ 0.44
NEDD1-205ENST00000553609 RBM27Q9P2N5 1060 aaKnown RBP17.78■□□□□ 0.44
NEDD1-205ENST00000553609 CXCL11O14625 94 aa17.77■□□□□ 0.44
NEDD1-205ENST00000553609 HOXD10P28358 340 aa17.77■□□□□ 0.44
NEDD1-205ENST00000553609 NKX2-3Q8TAU0 364 aa17.77■□□□□ 0.44
NEDD1-205ENST00000553609 SSH1Q8WYL5 1049 aa17.77■□□□□ 0.44
NEDD1-205ENST00000553609 PARK7Q99497 189 aaKnown RBP17.77■□□□□ 0.44
NEDD1-205ENST00000553609 SALL1Q9NSC2 1324 aa17.76■□□□□ 0.43
NEDD1-205ENST00000553609 SH3BP5LQ7L8J4 393 aa17.76■□□□□ 0.43
NEDD1-205ENST00000553609 GABRQQ9UN88 632 aa17.76■□□□□ 0.43
NEDD1-205ENST00000553609 A0A0G2JLL6 359 aaPredicted RBP17.75■□□□□ 0.43
NEDD1-205ENST00000553609 ZBTB22O15209 634 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 MAP3K10Q02779 954 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 PRRT2Q7Z6L0 340 aaPredicted RBP17.75■□□□□ 0.43
NEDD1-205ENST00000553609 U2AF1L4Q8WU68 220 aaKnown RBP17.75■□□□□ 0.43
NEDD1-205ENST00000553609 DPF3Q92784 378 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 IDI2Q9BXS1 227 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 RNF208Q9H0X6 261 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 USP40Q9NVE5 1235 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 DOCK2Q92608 1830 aa17.75■□□□□ 0.43
NEDD1-205ENST00000553609 GAKO14976 1311 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 MGAMO43451 1857 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 ANP32CO43423 234 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 LDHBP07195 334 aaKnown RBP17.74■□□□□ 0.43
NEDD1-205ENST00000553609 SLURP2P0DP57 97 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 RGS3P49796 1198 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 FCGRTP55899 365 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 ATP2B3Q16720 1220 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 SCYL3Q8IZE3 742 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 SLAIN1Q8ND83 568 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms