RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 ZKSCAN2Q63HK3 967 aa18.74■□□□□ 0.59
SDR39U1-205ENST00000553546 DIEXFQ68CQ4 756 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-205ENST00000553546 CCDC102BQ68D86 513 aa18.74■□□□□ 0.59
SDR39U1-205ENST00000553546 DAGLAQ9Y4D2 1042 aa18.74■□□□□ 0.59
SDR39U1-205ENST00000553546 PDS5AQ29RF7 1337 aaKnown RBP18.74■□□□□ 0.59
SDR39U1-205ENST00000553546 MVPQ14764 893 aaKnown RBP18.73■□□□□ 0.59
SDR39U1-205ENST00000553546 MIER1Q8N108 512 aa18.73■□□□□ 0.59
SDR39U1-205ENST00000553546 CLUAP1Q96AJ1 413 aa18.73■□□□□ 0.59
SDR39U1-205ENST00000553546 A0A1B0GUL7 405 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 ADORA1P30542 326 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 GTF2A2P52657 109 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 DIXDC1Q155Q3 683 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 FAM151AQ8WW52 585 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 GCC1Q96CN9 775 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 WRNIP1Q96S55 665 aa18.72■□□□□ 0.59
SDR39U1-205ENST00000553546 SPDYE5A6NIY4 337 aa18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 TFCP2Q12800 502 aa18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 RASGRF1Q13972 1273 aa18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 HABP4Q5JVS0 413 aaKnown RBP18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 CDC42EP5Q6NZY7 148 aa18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 FBXO46Q6PJ61 603 aaPredicted RBP18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 SLF2Q8IX21 1173 aa18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 R3HDMLQ9H3Y0 253 aa18.71■□□□□ 0.59
SDR39U1-205ENST00000553546 TIMM10P62072 90 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 SPTY2D1Q68D10 685 aaPredicted RBP18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 ERO1BQ86YB8 467 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 DZIP1Q86YF9 867 aaKnown RBP18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 OTUD5Q96G74 571 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 XAGE2Q96GT9 111 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 MS4A4AQ96JQ5 239 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 ZNF341Q9BYN7 854 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 TNNQ9UQP3 1299 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 BRCA2P51587 3418 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 AK9Q5TCS8 1911 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 MYH2Q9UKX2 1941 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 CENPFP49454 3210 aa18.7■□□□□ 0.58
SDR39U1-205ENST00000553546 RBBP6Q7Z6E9 1792 aaKnown RBP18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 CCL15-CCL14A0A0B4J2E2 113 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 G3BP1Q13283 466 aaKnown RBP eCLIP18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 CRHR2Q13324 411 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 CCL15Q16663 113 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 TMEM57Q8N5G2 664 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 ERO1AQ96HE7 468 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 PTPN18Q99952 460 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 SNCAIPQ9Y6H5 919 aa18.69■□□□□ 0.58
SDR39U1-205ENST00000553546 WDHD1O75717 1129 aaPredicted RBP18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 GORABQ5T7V8 394 aa18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 FTSJ3Q8IY81 847 aaKnown RBP18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 CNKSR2Q8WXI2 1034 aa18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 NEUROD6Q96NK8 337 aa18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 USP40Q9NVE5 1235 aa18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 ABCF2Q9UG63 623 aa18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 GAKO14976 1311 aa18.68■□□□□ 0.58
SDR39U1-205ENST00000553546 PNMA6EA0A0J9YXQ4 647 aa18.67■□□□□ 0.58
SDR39U1-205ENST00000553546 CETPP11597 493 aa18.67■□□□□ 0.58
SDR39U1-205ENST00000553546 TCP10Q12799 353 aa18.67■□□□□ 0.58
SDR39U1-205ENST00000553546 BRI3BPQ8WY22 251 aa18.67■□□□□ 0.58
SDR39U1-205ENST00000553546 ZCCHC17Q9NP64 241 aaKnown RBP18.67■□□□□ 0.58
SDR39U1-205ENST00000553546 NFIAQ12857 509 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 PPIL2Q13356 520 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 SNAPC2Q13487 334 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 TAF1CQ15572 869 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 MIGA2Q7L4E1 593 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 ZKSCAN4Q969J2 545 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 FAM163AQ96GL9 167 aaPredicted RBP18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 IDI2Q9BXS1 227 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 FAM198AQ9UFP1 575 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 TRIM17Q9Y577 477 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 ZBED9Q6R2W3 1325 aa18.66■□□□□ 0.58
SDR39U1-205ENST00000553546 DOCK2Q92608 1830 aa18.65■□□□□ 0.58
SDR39U1-205ENST00000553546 ENTPD3O75355 529 aa18.65■□□□□ 0.58
SDR39U1-205ENST00000553546 SP3Q02447 781 aa18.65■□□□□ 0.58
SDR39U1-205ENST00000553546 PPATQ06203 517 aa18.65■□□□□ 0.58
SDR39U1-205ENST00000553546 ERICH6Q7L0X2 663 aa18.65■□□□□ 0.58
SDR39U1-205ENST00000553546 OTOP1Q7RTM1 612 aa18.65■□□□□ 0.58
SDR39U1-205ENST00000553546 IRF6O14896 467 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 ARID4AP29374 1257 aaPredicted RBP18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 POLA2Q14181 598 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 ARHGEF6Q15052 776 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 SPATA5Q8NB90 893 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 GPR108Q9NPR9 543 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 ZNF112Q9UJU3 913 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 MROH7-TTC4A0A0A0MT08 1334 aa18.64■□□□□ 0.57
SDR39U1-205ENST00000553546 UQCRFS1P1P0C7P4 283 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 INPP5BP32019 993 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 RGS3P49796 1198 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 GSTO1P78417 241 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 OS9Q13438 667 aaPredicted RBP18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 NOL9Q5SY16 702 aaKnown RBP18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 ITPRIPQ8IWB1 547 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 FAM43AQ8N2R8 423 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 CD99L2Q8TCZ2 262 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 SSH3Q8TE77 659 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 HMG20BQ9P0W2 317 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 RFX7Q2KHR2 1363 aa18.63■□□□□ 0.57
SDR39U1-205ENST00000553546 POTEFA5A3E0 1075 aa18.62■□□□□ 0.57
SDR39U1-205ENST00000553546 MAP4K4O95819 1239 aaPredicted RBP18.62■□□□□ 0.57
SDR39U1-205ENST00000553546 LDHCP07864 332 aa18.62■□□□□ 0.57
SDR39U1-205ENST00000553546 BTDP43251 543 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms