RNA–Protein interactions for RNA: ENST00000553438.1

IFT43-205, Transcript of intraflagellar transport 43, humanhuman

TSL 5

Gene IFT43, Length 472 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-205ENST00000553438 SRRDQ9UH36 339 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 CPA4Q9UI42 421 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 MAST3O60307 1309 aa12.85□□□□□ -0.35
IFT43-205ENST00000553438 PDE8BO95263 885 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 OSBPP22059 807 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 HOXD10P28358 340 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 INPP5BP32019 993 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 RABL6Q3YEC7 729 aaPredicted RBP12.84□□□□□ -0.35
IFT43-205ENST00000553438 HHIPL2Q6UWX4 724 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 ANKRD23Q86SG2 305 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 VGLL2Q8N8G2 317 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 DPF3Q92784 378 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 TRIM47Q96LD4 638 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 BICC1Q9H694 974 aaKnown RBP12.84□□□□□ -0.35
IFT43-205ENST00000553438 SUGT1Q9Y2Z0 365 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 SZT2Q5T011 3432 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 UTYO14607 1347 aa12.84□□□□□ -0.35
IFT43-205ENST00000553438 PDHXO00330 501 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 FMNL1O95466 1100 aaPredicted RBP12.83□□□□□ -0.36
IFT43-205ENST00000553438 GRK4P32298 578 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 ANKRD44Q8N8A2 993 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 NKX2-3Q8TAU0 364 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 RAET1EQ8TD07 263 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 MRS2Q9HD23 443 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 KCNH4Q9UQ05 1017 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 RANBP2P49792 3224 aaKnown RBP12.83□□□□□ -0.36
IFT43-205ENST00000553438 MYPNQ86TC9 1320 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 ADGRA2Q96PE1 1338 aa12.83□□□□□ -0.36
IFT43-205ENST00000553438 GJB1P08034 283 aa12.82□□□□□ -0.36
IFT43-205ENST00000553438 IFIT1P09914 478 aaKnown RBP12.82□□□□□ -0.36
IFT43-205ENST00000553438 KLHDC4Q8TBB5 520 aa12.82□□□□□ -0.36
IFT43-205ENST00000553438 FAM151AQ8WW52 585 aa12.82□□□□□ -0.36
IFT43-205ENST00000553438 RBM27Q9P2N5 1060 aaKnown RBP12.82□□□□□ -0.36
IFT43-205ENST00000553438 KIF16BQ96L93 1317 aa12.82□□□□□ -0.36
IFT43-205ENST00000553438 CCL5P13501 91 aa12.81□□□□□ -0.36
IFT43-205ENST00000553438 FGFR2P21802 821 aa12.81□□□□□ -0.36
IFT43-205ENST00000553438 GJA8P48165 433 aa12.81□□□□□ -0.36
IFT43-205ENST00000553438 MOGSQ13724 837 aa12.81□□□□□ -0.36
IFT43-205ENST00000553438 PUM3Q15397 648 aaKnown RBP12.81□□□□□ -0.36
IFT43-205ENST00000553438 UBE2Q1Q7Z7E8 422 aa12.81□□□□□ -0.36
IFT43-205ENST00000553438 PARK7Q99497 189 aaKnown RBP12.81□□□□□ -0.36
IFT43-205ENST00000553438 ZNF112Q9UJU3 913 aa12.81□□□□□ -0.36
IFT43-205ENST00000553438 UBXN2AP68543 259 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 PRKCZQ05513 592 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 TCP10Q12799 353 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 NOL9Q5SY16 702 aaKnown RBP12.8□□□□□ -0.36
IFT43-205ENST00000553438 WDR66Q8TBY9 1149 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 HTATIP2Q9BUP3 242 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 RNF208Q9H0X6 261 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 BIN2Q9UBW5 565 aaPredicted RBP12.8□□□□□ -0.36
IFT43-205ENST00000553438 DAGLAQ9Y4D2 1042 aa12.8□□□□□ -0.36
IFT43-205ENST00000553438 BCRP11274 1271 aa12.79□□□□□ -0.36
IFT43-205ENST00000553438 FCGRTP55899 365 aa12.79□□□□□ -0.36
IFT43-205ENST00000553438 NFIAQ12857 509 aa12.79□□□□□ -0.36
IFT43-205ENST00000553438 DIXDC1Q155Q3 683 aa12.79□□□□□ -0.36
IFT43-205ENST00000553438 CDC42EP5Q6NZY7 148 aa12.79□□□□□ -0.36
IFT43-205ENST00000553438 CXCL11O14625 94 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 FARP2O94887 1054 aaPredicted RBP12.78□□□□□ -0.36
IFT43-205ENST00000553438 CYP2C8P10632 490 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 SLC5A1P13866 664 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 ZEB1P37275 1124 aaPredicted RBP12.78□□□□□ -0.36
IFT43-205ENST00000553438 GPAT2Q6NUI2 795 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 SLAIN1Q8ND83 568 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 U2AF1L4Q8WU68 220 aaKnown RBP12.78□□□□□ -0.36
IFT43-205ENST00000553438 PRO3102Q9H379 93 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 FAM198AQ9UFP1 575 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 NR2E3Q9Y5X4 410 aa12.78□□□□□ -0.36
IFT43-205ENST00000553438 EYA2O00167 538 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 PRDX5P30044 214 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 LPIN2Q92539 896 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 UNC93B1Q9H1C4 597 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 USP40Q9NVE5 1235 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 GABRQQ9UN88 632 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 AK9Q5TCS8 1911 aa12.77□□□□□ -0.37
IFT43-205ENST00000553438 ZBTB7BO15156 539 aaPredicted RBP12.76□□□□□ -0.37
IFT43-205ENST00000553438 RFX5P48382 616 aaPredicted RBP12.76□□□□□ -0.37
IFT43-205ENST00000553438 ZFPM1Q8IX07 1006 aa12.76□□□□□ -0.37
IFT43-205ENST00000553438 MRPL50Q8N5N7 158 aaKnown RBP12.76□□□□□ -0.37
IFT43-205ENST00000553438 USP44Q9H0E7 712 aa12.76□□□□□ -0.37
IFT43-205ENST00000553438 A0A0G2JLL6 359 aaPredicted RBP12.75□□□□□ -0.37
IFT43-205ENST00000553438 PHF20L1A8MW92 1017 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 ADCY3O60266 1144 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 SGPL1O95470 568 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 LDHBP07195 334 aaKnown RBP12.75□□□□□ -0.37
IFT43-205ENST00000553438 PTPRCP08575 1304 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 FLT3LGP49771 235 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 ATRNL1Q5VV63 1379 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 FASTKD5Q7L8L6 764 aaKnown RBP12.75□□□□□ -0.37
IFT43-205ENST00000553438 PRRT2Q7Z6L0 340 aaPredicted RBP12.75□□□□□ -0.37
IFT43-205ENST00000553438 SCYL3Q8IZE3 742 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 PICK1Q9NRD5 415 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 ZHX2Q9Y6X8 837 aa12.75□□□□□ -0.37
IFT43-205ENST00000553438 TNPO2O14787 897 aaKnown RBP12.74□□□□□ -0.37
IFT43-205ENST00000553438 INHAP05111 366 aa12.74□□□□□ -0.37
IFT43-205ENST00000553438 ELNP15502 786 aa12.74□□□□□ -0.37
IFT43-205ENST00000553438 PTPRAP18433 802 aa12.74□□□□□ -0.37
IFT43-205ENST00000553438 RGS3P49796 1198 aa12.74□□□□□ -0.37
IFT43-205ENST00000553438 GADL1Q6ZQY3 521 aa12.74□□□□□ -0.37
IFT43-205ENST00000553438 ATG9AQ7Z3C6 839 aa12.74□□□□□ -0.37
IFT43-205ENST00000553438 GNL3LQ9NVN8 582 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms