RNA–Protein interactions for RNA: ENST00000553256.5

PTCH1-227, Transcript of patched 1, humanhuman

TSL 4

Gene PTCH1, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-227ENST00000553256 YTHDC1Q96MU7 727 aaKnown RBP23.71■■□□□ 1.39
PTCH1-227ENST00000553256 CSRNP1Q96S65 589 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 FAM198AQ9UFP1 575 aa23.71■■□□□ 1.39
PTCH1-227ENST00000553256 ANGEL1Q9UNK9 670 aaKnown RBP23.71■■□□□ 1.39
PTCH1-227ENST00000553256 CYP2E1P05181 493 aaPredicted RBP23.7■■□□□ 1.38
PTCH1-227ENST00000553256 ABCF2Q9UG63 623 aa23.7■■□□□ 1.38
PTCH1-227ENST00000553256 GPR75-ASB3A0A0A6YYF3 556 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 CTCFP49711 727 aaPredicted RBP23.69■■□□□ 1.38
PTCH1-227ENST00000553256 RHBDL3P58872 404 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 HSP90AB4PQ58FF6 505 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 GORABQ5T7V8 394 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 SPTY2D1Q68D10 685 aaPredicted RBP23.69■■□□□ 1.38
PTCH1-227ENST00000553256 IDI2Q9BXS1 227 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 PRDM10Q9NQV6 1147 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 MYH2Q9UKX2 1941 aa23.69■■□□□ 1.38
PTCH1-227ENST00000553256 ATRNL1Q5VV63 1379 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 MROH7-TTC4A0A0A0MT08 1334 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 PPP1R12BO60237 982 aaPredicted RBP23.68■■□□□ 1.38
PTCH1-227ENST00000553256 HMMRO75330 724 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 TNNI2P48788 182 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 CCDC158Q5M9N0 1113 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 ERICH6Q7L0X2 663 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 FAM151AQ8WW52 585 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 CLMNQ96JQ2 1002 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 SNRKQ9NRH2 765 aa23.68■■□□□ 1.38
PTCH1-227ENST00000553256 OTOFQ9HC10 1997 aa23.67■■□□□ 1.38
PTCH1-227ENST00000553256 WDHD1O75717 1129 aaPredicted RBP23.67■■□□□ 1.38
PTCH1-227ENST00000553256 TTLL12Q14166 644 aaPredicted RBP23.67■■□□□ 1.38
PTCH1-227ENST00000553256 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.67■■□□□ 1.38
PTCH1-227ENST00000553256 ZFPM1Q8IX07 1006 aa23.67■■□□□ 1.38
PTCH1-227ENST00000553256 IL1RAPL2Q9NP60 686 aa23.67■■□□□ 1.38
PTCH1-227ENST00000553256 USP40Q9NVE5 1235 aa23.67■■□□□ 1.38
PTCH1-227ENST00000553256 LAMB1P07942 1786 aa23.67■■□□□ 1.38
PTCH1-227ENST00000553256 RAB11FIP3O75154 756 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 GJA5P36382 358 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 ZAP70P43403 619 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 TTC39AQ5SRH9 613 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 SPRYD7Q5W111 196 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.66■■□□□ 1.38
PTCH1-227ENST00000553256 AIDAQ96BJ3 306 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 KIF1BPQ96EK5 621 aa23.66■■□□□ 1.38
PTCH1-227ENST00000553256 IGSF3O75054 1194 aa23.65■■□□□ 1.38
PTCH1-227ENST00000553256 LBX1P52954 281 aa23.65■■□□□ 1.38
PTCH1-227ENST00000553256 SH3BP5LQ7L8J4 393 aa23.65■■□□□ 1.38
PTCH1-227ENST00000553256 AACSQ86V21 672 aa23.65■■□□□ 1.38
PTCH1-227ENST00000553256 DZIP1Q86YF9 867 aaKnown RBP23.65■■□□□ 1.38
PTCH1-227ENST00000553256 DDX4Q9NQI0 724 aaKnown RBP23.65■■□□□ 1.38
PTCH1-227ENST00000553256 PIH1D3Q9NQM4 214 aaKnown RBP23.65■■□□□ 1.38
PTCH1-227ENST00000553256 PCDHB15Q9Y5E8 787 aa23.65■■□□□ 1.38
PTCH1-227ENST00000553256 CA12O43570 354 aa23.64■■□□□ 1.37
PTCH1-227ENST00000553256 BTDP43251 543 aa23.64■■□□□ 1.37
PTCH1-227ENST00000553256 TM4SF4P48230 202 aa23.64■■□□□ 1.37
PTCH1-227ENST00000553256 REM2Q8IYK8 340 aaPredicted RBP23.64■■□□□ 1.37
PTCH1-227ENST00000553256 TMOD2Q9NZR1 351 aa23.64■■□□□ 1.37
PTCH1-227ENST00000553256 NPM3O75607 178 aaKnown RBP23.63■■□□□ 1.37
PTCH1-227ENST00000553256 IREB2P48200 963 aaKnown RBP23.63■■□□□ 1.37
PTCH1-227ENST00000553256 ADGRA1Q86SQ6 560 aa23.63■■□□□ 1.37
PTCH1-227ENST00000553256 WNK4Q96J92 1243 aa23.63■■□□□ 1.37
PTCH1-227ENST00000553256 RNF186Q9NXI6 227 aa23.63■■□□□ 1.37
PTCH1-227ENST00000553256 SAGE1Q9NXZ1 904 aa23.63■■□□□ 1.37
PTCH1-227ENST00000553256 ENTPD3O75355 529 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 MAP3K10Q02779 954 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 SLF2Q8IX21 1173 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 ANKRD13AQ8IZ07 590 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 DCTPP1Q9H773 170 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 TSKSQ9UJT2 592 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 ZNF112Q9UJU3 913 aa23.62■■□□□ 1.37
PTCH1-227ENST00000553256 MYO5AQ9Y4I1 1855 aaKnown RBP23.62■■□□□ 1.37
PTCH1-227ENST00000553256 MAST2Q6P0Q8 1798 aa23.61■■□□□ 1.37
PTCH1-227ENST00000553256 ZBTB48P10074 688 aaPredicted RBP23.61■■□□□ 1.37
PTCH1-227ENST00000553256 RGS3P49796 1198 aa23.61■■□□□ 1.37
PTCH1-227ENST00000553256 PPIL4Q8WUA2 492 aaKnown RBP eCLIP23.61■■□□□ 1.37
PTCH1-227ENST00000553256 ANTXR1Q9H6X2 564 aa23.61■■□□□ 1.37
PTCH1-227ENST00000553256 NDUFB9Q9Y6M9 179 aa23.61■■□□□ 1.37
PTCH1-227ENST00000553256 PPP4CP60510 307 aa23.6■■□□□ 1.37
PTCH1-227ENST00000553256 MAP3K9P80192 1104 aa23.6■■□□□ 1.37
PTCH1-227ENST00000553256 TCP10Q12799 353 aa23.6■■□□□ 1.37
PTCH1-227ENST00000553256 VGLL4Q14135 290 aa23.6■■□□□ 1.37
PTCH1-227ENST00000553256 CLASRPQ8N2M8 674 aaKnown RBP23.6■■□□□ 1.37
PTCH1-227ENST00000553256 RAI14Q9P0K7 980 aa23.6■■□□□ 1.37
PTCH1-227ENST00000553256 MAP4K4O95819 1239 aaPredicted RBP23.59■■□□□ 1.37
PTCH1-227ENST00000553256 GSTO1P78417 241 aa23.59■■□□□ 1.37
PTCH1-227ENST00000553256 SLC10A4Q96EP9 437 aa23.59■■□□□ 1.37
PTCH1-227ENST00000553256 LRP2BPQ9P2M1 347 aa23.59■■□□□ 1.37
PTCH1-227ENST00000553256 SNCAIPQ9Y6H5 919 aa23.59■■□□□ 1.37
PTCH1-227ENST00000553256 DOCK2Q92608 1830 aa23.59■■□□□ 1.37
PTCH1-227ENST00000553256 TESPA1A2RU30 521 aaPredicted RBP23.58■■□□□ 1.37
PTCH1-227ENST00000553256 DDTLA6NHG4 134 aaPredicted RBP23.58■■□□□ 1.37
PTCH1-227ENST00000553256 LDHCP07864 332 aa23.58■■□□□ 1.37
PTCH1-227ENST00000553256 CNKSR2Q8WXI2 1034 aa23.58■■□□□ 1.37
PTCH1-227ENST00000553256 CRBNQ96SW2 442 aa23.58■■□□□ 1.37
PTCH1-227ENST00000553256 BEGAINQ9BUH8 593 aa23.58■■□□□ 1.37
PTCH1-227ENST00000553256 CFHR5Q9BXR6 569 aa23.58■■□□□ 1.37
PTCH1-227ENST00000553256 COL2A1P02458 1487 aaPredicted RBP23.57■■□□□ 1.36
PTCH1-227ENST00000553256 APBB1O00213 710 aa23.57■■□□□ 1.36
PTCH1-227ENST00000553256 MKRN3Q13064 507 aaKnown RBP23.57■■□□□ 1.36
PTCH1-227ENST00000553256 MS4A4AQ96JQ5 239 aa23.57■■□□□ 1.36
PTCH1-227ENST00000553256 PHF20L1A8MW92 1017 aa23.56■■□□□ 1.36
PTCH1-227ENST00000553256 SLURP2P0DP57 97 aa23.56■■□□□ 1.36
PTCH1-227ENST00000553256 NAA16Q6N069 864 aaPredicted RBP23.56■■□□□ 1.36
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