RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 ZNF296Q8WUU4 475 aaPredicted RBP19.63■□□□□ 0.73
CDK4-215ENST00000553237 CNKSR2Q8WXI2 1034 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 OPTNQ96CV9 577 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 USP40Q9NVE5 1235 aa19.63■□□□□ 0.73
CDK4-215ENST00000553237 GPR25O00155 361 aa19.62■□□□□ 0.73
CDK4-215ENST00000553237 NFIAQ12857 509 aa19.62■□□□□ 0.73
CDK4-215ENST00000553237 OS9Q13438 667 aaPredicted RBP19.62■□□□□ 0.73
CDK4-215ENST00000553237 VGLL4Q14135 290 aa19.62■□□□□ 0.73
CDK4-215ENST00000553237 IFNL1Q8IU54 200 aa19.62■□□□□ 0.73
CDK4-215ENST00000553237 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
CDK4-215ENST00000553237 IGF2BP3O00425 579 aaKnown RBP eCLIP19.61■□□□□ 0.73
CDK4-215ENST00000553237 ZBTB22O15209 634 aa19.61■□□□□ 0.73
CDK4-215ENST00000553237 MIGA2Q7L4E1 593 aa19.61■□□□□ 0.73
CDK4-215ENST00000553237 DZIP1Q86YF9 867 aaKnown RBP19.61■□□□□ 0.73
CDK4-215ENST00000553237 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.61■□□□□ 0.731e-7■■■■□ 25.5
CDK4-215ENST00000553237 SSH3Q8TE77 659 aa19.61■□□□□ 0.73
CDK4-215ENST00000553237 FAM151AQ8WW52 585 aa19.61■□□□□ 0.73
CDK4-215ENST00000553237 CSADQ9Y600 493 aa19.61■□□□□ 0.73
CDK4-215ENST00000553237 SURF6O75683 361 aaKnown RBP19.6■□□□□ 0.73
CDK4-215ENST00000553237 ALDH1A1P00352 501 aa19.6■□□□□ 0.73
CDK4-215ENST00000553237 PI16Q6UXB8 463 aa19.6■□□□□ 0.73
CDK4-215ENST00000553237 CTU1Q7Z7A3 348 aaKnown RBP19.6■□□□□ 0.73
CDK4-215ENST00000553237 WRNIP1Q96S55 665 aa19.6■□□□□ 0.73
CDK4-215ENST00000553237 HMG20BQ9P0W2 317 aa19.6■□□□□ 0.73
CDK4-215ENST00000553237 PDS5AQ29RF7 1337 aaKnown RBP19.59■□□□□ 0.73
CDK4-215ENST00000553237 SPTY2D1Q68D10 685 aaPredicted RBP19.59■□□□□ 0.73
CDK4-215ENST00000553237 ZFPM1Q8IX07 1006 aa19.59■□□□□ 0.73
CDK4-215ENST00000553237 ZKSCAN4Q969J2 545 aaPredicted RBP19.59■□□□□ 0.73
CDK4-215ENST00000553237 HOOK2Q96ED9 719 aa19.59■□□□□ 0.73
CDK4-215ENST00000553237 FAM198AQ9UFP1 575 aa19.59■□□□□ 0.73
CDK4-215ENST00000553237 DCAF15Q66K64 600 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 TBC1D9Q6ZT07 1266 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 SPATA5Q8NB90 893 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 OTUD5Q96G74 571 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 PTPN18Q99952 460 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 CFHR5Q9BXR6 569 aa19.58■□□□□ 0.72
CDK4-215ENST00000553237 GAKO14976 1311 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 FKTNO75072 461 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 MECOMQ03112 1051 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 TNNI3KQ59H18 835 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 OTUD7BQ6GQQ9 843 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 SLF2Q8IX21 1173 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 MS4A4AQ96JQ5 239 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 SNCAIPQ9Y6H5 919 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 FPGT-TNNI3KV9GXZ4 949 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 OTOFQ9HC10 1997 aa19.57■□□□□ 0.72
CDK4-215ENST00000553237 RPAP1Q9BWH6 1393 aaPredicted RBP19.57■□□□□ 0.72
CDK4-215ENST00000553237 TESPA1A2RU30 521 aaPredicted RBP19.56■□□□□ 0.72
CDK4-215ENST00000553237 ARID4AP29374 1257 aaPredicted RBP19.56■□□□□ 0.72
CDK4-215ENST00000553237 MCAMP43121 646 aa19.56■□□□□ 0.72
CDK4-215ENST00000553237 NOM1Q5C9Z4 860 aaKnown RBP19.56■□□□□ 0.72
CDK4-215ENST00000553237 DBNDD2Q9BQY9 259 aa19.56■□□□□ 0.72
CDK4-215ENST00000553237 ZNF341Q9BYN7 854 aa19.56■□□□□ 0.72
CDK4-215ENST00000553237 SPDYE5A6NIY4 337 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 UQCRFS1P1P0C7P4 283 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 INPP5BP32019 993 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 BTDP43251 543 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 RGS3P49796 1198 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 TTC39AQ5SRH9 613 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 CEP85Q6P2H3 762 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 ZNF384Q8TF68 577 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 BRI3BPQ8WY22 251 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 FAM163AQ96GL9 167 aaPredicted RBP19.55■□□□□ 0.72
CDK4-215ENST00000553237 GPR108Q9NPR9 543 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 SNRKQ9NRH2 765 aa19.55■□□□□ 0.72
CDK4-215ENST00000553237 NOP58Q9Y2X3 529 aaKnown RBP19.55■□□□□ 0.72
CDK4-215ENST00000553237 MROH7-TTC4A0A0A0MT08 1334 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 CCL15-CCL14A0A0B4J2E2 113 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 GTF2A2P52657 109 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 CRHR2Q13324 411 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 CCL15Q16663 113 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 ERO1BQ86YB8 467 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 IDI2Q9BXS1 227 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 RAI14Q9P0K7 980 aa19.54■□□□□ 0.72
CDK4-215ENST00000553237 MYH2Q9UKX2 1941 aa19.53■□□□□ 0.72
CDK4-215ENST00000553237 PICALMQ13492 652 aa19.53■□□□□ 0.72
CDK4-215ENST00000553237 CCDC158Q5M9N0 1113 aa19.53■□□□□ 0.72
CDK4-215ENST00000553237 LRP2BPQ9P2M1 347 aa19.53■□□□□ 0.72
CDK4-215ENST00000553237 GPR75-ASB3A0A0A6YYF3 556 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 IRF6O14896 467 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 ENTPD3O75355 529 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 WDHD1O75717 1129 aaPredicted RBP19.52■□□□□ 0.72
CDK4-215ENST00000553237 MS4A1P11836 297 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 GSTO1P78417 241 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 SH3BP5LQ7L8J4 393 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 ZSCAN29Q8IWY8 852 aaPredicted RBP19.52■□□□□ 0.72
CDK4-215ENST00000553237 NSUN4Q96CB9 384 aaKnown RBP19.52■□□□□ 0.72
CDK4-215ENST00000553237 CCDC8Q9H0W5 538 aaPredicted RBP19.52■□□□□ 0.72
CDK4-215ENST00000553237 DDX4Q9NQI0 724 aaKnown RBP19.52■□□□□ 0.72
CDK4-215ENST00000553237 ZNF112Q9UJU3 913 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 RCAN3Q9UKA8 241 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 COG6Q9Y2V7 657 aa19.52■□□□□ 0.72
CDK4-215ENST00000553237 AK9Q5TCS8 1911 aa19.51■□□□□ 0.71
CDK4-215ENST00000553237 LDHCP07864 332 aa19.51■□□□□ 0.71
CDK4-215ENST00000553237 PKN2Q16513 984 aaKnown RBP19.51■□□□□ 0.71
CDK4-215ENST00000553237 FAM43AQ8N2R8 423 aa19.51■□□□□ 0.71
CDK4-215ENST00000553237 HPS5Q9UPZ3 1129 aa19.51■□□□□ 0.71
CDK4-215ENST00000553237 EXOC6BQ9Y2D4 811 aa19.51■□□□□ 0.71
CDK4-215ENST00000553237 DDTLA6NHG4 134 aaPredicted RBP19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms