RNA–Protein interactions for RNA: ENST00000553217.5

TMEM106C-221, Transcript of transmembrane protein 106C, humanhuman

TSL 3

Gene TMEM106C, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-221ENST00000553217 AIMP1Q12904 312 aaKnown RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 SNW1Q13573 536 aaKnown RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 CCDC93Q567U6 631 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 MAP1SQ66K74 1059 aaPredicted RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 DPY19L2Q6NUT2 758 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 GBP6Q6ZN66 633 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 TAX1BP1Q86VP1 789 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 LRRC8AQ8IWT6 810 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 MRPL50Q8N5N7 158 aaKnown RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 JMYQ8N9B5 988 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 RABGGTAQ92696 567 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 LRRCC1Q9C099 1032 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 TTC12Q9H892 705 aaPredicted RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 VIPAS39Q9H9C1 493 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 A1CFQ9NQ94 594 aaKnown RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 CLEC11AQ9Y240 323 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 GJA3Q9Y6H8 435 aa6.49□□□□□ -1.37
TMEM106C-221ENST00000553217 MYH15Q9Y2K3 1946 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 SHTN1A0MZ66 631 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 ANKRD18BA2A2Z9 1011 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 SPDYE4A6NLX3 237 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TRIM6-TRIM34B2RNG4 842 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CPP00450 1065 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 HMGB1P09429 215 aaKnown RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 NEFHP12036 1026 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 SKILP12757 684 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 IARSP41252 1262 aaKnown RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 SSR1P43307 286 aaKnown RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 FKBP4Q02790 459 aaKnown RBP eCLIP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TYRO3Q06418 890 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 GRM1Q13255 1194 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 SLMAPQ14BN4 828 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TWISTNBQ3B726 338 aaPredicted RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CCDC30Q5VVM6 783 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 IQCEQ6IPM2 695 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CCDC70Q6NSX1 233 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CHADLQ6NUI6 762 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 DLK2Q6UY11 383 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 MICALCLQ6ZW33 695 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CCDC186Q7Z3E2 898 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TNS4Q8IZW8 715 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CEP112Q8N8E3 955 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 C16orf45Q96MC5 204 aaPredicted RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 GPR101Q96P66 508 aaPredicted RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TRIM34Q9BYJ4 488 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CLSTN2Q9H4D0 955 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TAF1DQ9H5J8 278 aaPredicted RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 MYO1AQ9UBC5 1043 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 TSPYL4Q9UJ04 414 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 ZNF652Q9Y2D9 606 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 ZDHHC9Q9Y397 364 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CEP83Q9Y592 693 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 CYP46A1Q9Y6A2 500 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 LAMB2P55268 1798 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 SNED1Q8TER0 1413 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 MAP3K15Q6ZN16 1313 aa6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 ZC3H4Q9UPT8 1303 aaKnown RBP6.48□□□□□ -1.37
TMEM106C-221ENST00000553217 RFX7Q2KHR2 1363 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 MYO1CO00159 1063 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 FOXN1O15353 648 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 VAMP4O75379 141 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 NTSR2O95665 410 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 GNAI2P04899 355 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 CCDC172P0C7W6 258 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 ZNF853P0CG23 659 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 CASTP20810 708 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 EPHX2P34913 555 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 PDE1AP54750 535 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 ETF1P62495 437 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 PLCB2Q00722 1185 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 PDIA6Q15084 440 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 AOC3Q16853 763 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 HSP90AB3PQ58FF7 597 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 DNAJC21Q5F1R6 531 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 GORABQ5T7V8 394 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 TPTE2Q6XPS3 522 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 KIF6Q6ZMV9 814 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 CCDC73Q6ZRK6 1079 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 HDXQ7Z353 690 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 NBPF11Q86T75 865 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 SRLQ86TD4 932 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 CCAR2Q8N163 923 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 FAM71BQ8TC56 605 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 GOLGA1Q92805 767 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 ZNF396Q96N95 335 aaPredicted RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 PSMD1Q99460 953 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 LLPHQ9BRT6 129 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 NAA15Q9BXJ9 866 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 DACH1Q9UI36 760 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 TRIM35Q9UPQ4 493 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 JRKLQ9Y4A0 524 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 LRRFIP2Q9Y608 721 aaKnown RBP6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 LTBP3Q9NS15 1303 aa6.47□□□□□ -1.37
TMEM106C-221ENST00000553217 ADAMTSL1Q8N6G6 1762 aa6.46□□□□□ -1.37
TMEM106C-221ENST00000553217 A0A087WUV0 522 aaPredicted RBP6.46□□□□□ -1.38
TMEM106C-221ENST00000553217 SRRM3A6NNA2 597 aaPredicted RBP6.46□□□□□ -1.38
TMEM106C-221ENST00000553217 TRAF5O00463 557 aa6.46□□□□□ -1.38
TMEM106C-221ENST00000553217 PPEF1O14829 653 aaPredicted RBP6.46□□□□□ -1.38
TMEM106C-221ENST00000553217 IKBKBO14920 756 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms