RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 SNRKQ9NRH2 765 aa23.07■■□□□ 1.28
HDAC4-217ENST00000553145 TMOD2Q9NZR1 351 aa23.07■■□□□ 1.28
HDAC4-217ENST00000553145 APBB1O00213 710 aa23.06■■□□□ 1.28
HDAC4-217ENST00000553145 MECOMQ03112 1051 aa23.06■■□□□ 1.28
HDAC4-217ENST00000553145 HSP90AB4PQ58FF6 505 aa23.06■■□□□ 1.28
HDAC4-217ENST00000553145 COL13A1Q5TAT6 717 aaPredicted RBP23.06■■□□□ 1.28
HDAC4-217ENST00000553145 FKBP1CQ5VVH2 108 aa23.06■■□□□ 1.28
HDAC4-217ENST00000553145 SPTY2D1Q68D10 685 aaPredicted RBP23.06■■□□□ 1.28
HDAC4-217ENST00000553145 ERICH6Q7L0X2 663 aa23.06■■□□□ 1.28
HDAC4-217ENST00000553145 USP2O75604 605 aaPredicted RBP23.05■■□□□ 1.28
HDAC4-217ENST00000553145 HSPA8P11142 646 aaKnown RBP23.05■■□□□ 1.28
HDAC4-217ENST00000553145 FAM83AQ86UY5 434 aa23.05■■□□□ 1.28
HDAC4-217ENST00000553145 AACSQ86V21 672 aa23.05■■□□□ 1.28
HDAC4-217ENST00000553145 ZNF512BQ96KM6 892 aaPredicted RBP23.05■■□□□ 1.28
HDAC4-217ENST00000553145 OTOFQ9HC10 1997 aa23.05■■□□□ 1.28
HDAC4-217ENST00000553145 PPP1R12BO60237 982 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-217ENST00000553145 CTCFP49711 727 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-217ENST00000553145 NFIAQ12857 509 aa23.04■■□□□ 1.28
HDAC4-217ENST00000553145 FAM163AQ96GL9 167 aaPredicted RBP23.04■■□□□ 1.28
HDAC4-217ENST00000553145 CLMNQ96JQ2 1002 aa23.04■■□□□ 1.28
HDAC4-217ENST00000553145 USP40Q9NVE5 1235 aa23.04■■□□□ 1.28
HDAC4-217ENST00000553145 MROH7-TTC4A0A0A0MT08 1334 aa23.04■■□□□ 1.28
HDAC4-217ENST00000553145 NSUN4Q96CB9 384 aaKnown RBP23.03■■□□□ 1.28
HDAC4-217ENST00000553145 KIF1BPQ96EK5 621 aa23.03■■□□□ 1.28
HDAC4-217ENST00000553145 FAM198AQ9UFP1 575 aa23.03■■□□□ 1.28
HDAC4-217ENST00000553145 TSKSQ9UJT2 592 aa23.03■■□□□ 1.28
HDAC4-217ENST00000553145 RFX7Q2KHR2 1363 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 RPAP1Q9BWH6 1393 aaPredicted RBP23.02■■□□□ 1.28
HDAC4-217ENST00000553145 CYP2E1P05181 493 aaPredicted RBP23.02■■□□□ 1.28
HDAC4-217ENST00000553145 BTDP43251 543 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 ZAP70P43403 619 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 LBX1P52954 281 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 MKRN3Q13064 507 aaKnown RBP23.02■■□□□ 1.28
HDAC4-217ENST00000553145 CSRNP1Q96S65 589 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 BEGAINQ9BUH8 593 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 RAI14Q9P0K7 980 aa23.02■■□□□ 1.28
HDAC4-217ENST00000553145 MAST2Q6P0Q8 1798 aa23.01■■□□□ 1.27
HDAC4-217ENST00000553145 TCP10Q12799 353 aa23.01■■□□□ 1.27
HDAC4-217ENST00000553145 SLF2Q8IX21 1173 aa23.01■■□□□ 1.27
HDAC4-217ENST00000553145 FAM151AQ8WW52 585 aa23.01■■□□□ 1.27
HDAC4-217ENST00000553145 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.01■■□□□ 1.27
HDAC4-217ENST00000553145 RAB11FIP3O75154 756 aa23■■□□□ 1.27
HDAC4-217ENST00000553145 IREB2P48200 963 aaKnown RBP23■■□□□ 1.27
HDAC4-217ENST00000553145 PIH1D3Q9NQM4 214 aaKnown RBP23■■□□□ 1.27
HDAC4-217ENST00000553145 LRP2BPQ9P2M1 347 aa23■■□□□ 1.27
HDAC4-217ENST00000553145 NDUFB9Q9Y6M9 179 aa23■■□□□ 1.27
HDAC4-217ENST00000553145 MYO5AQ9Y4I1 1855 aaKnown RBP23■■□□□ 1.27
HDAC4-217ENST00000553145 GPR75-ASB3A0A0A6YYF3 556 aa22.99■■□□□ 1.27
HDAC4-217ENST00000553145 SPRYD7Q5W111 196 aa22.99■■□□□ 1.27
HDAC4-217ENST00000553145 ZFPM1Q8IX07 1006 aa22.99■■□□□ 1.27
HDAC4-217ENST00000553145 CLASRPQ8N2M8 674 aaKnown RBP22.99■■□□□ 1.27
HDAC4-217ENST00000553145 RHBDL3P58872 404 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 ANKRD13AQ8IZ07 590 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 SLC10A4Q96EP9 437 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 CRBNQ96SW2 442 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 IDI2Q9BXS1 227 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 BCL11AQ9H165 835 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 PRDM10Q9NQV6 1147 aa22.98■■□□□ 1.27
HDAC4-217ENST00000553145 UNCXA6NJT0 531 aa22.97■■□□□ 1.27
HDAC4-217ENST00000553145 CA12O43570 354 aa22.97■■□□□ 1.27
HDAC4-217ENST00000553145 WDHD1O75717 1129 aaPredicted RBP22.97■■□□□ 1.27
HDAC4-217ENST00000553145 RGS3P49796 1198 aa22.97■■□□□ 1.27
HDAC4-217ENST00000553145 GSTO1P78417 241 aa22.97■■□□□ 1.27
HDAC4-217ENST00000553145 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.97■■□□□ 1.27
HDAC4-217ENST00000553145 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.97■■□□□ 1.27
HDAC4-217ENST00000553145 WNK4Q96J92 1243 aa22.97■■□□□ 1.27
HDAC4-217ENST00000553145 DDX4Q9NQI0 724 aaKnown RBP22.97■■□□□ 1.27
HDAC4-217ENST00000553145 PCDHB15Q9Y5E8 787 aa22.97■■□□□ 1.27
HDAC4-217ENST00000553145 LDHCP07864 332 aa22.96■■□□□ 1.27
HDAC4-217ENST00000553145 GJA5P36382 358 aa22.96■■□□□ 1.27
HDAC4-217ENST00000553145 ANTXR1Q9H6X2 564 aa22.96■■□□□ 1.27
HDAC4-217ENST00000553145 ELP3Q9H9T3 547 aa22.96■■□□□ 1.27
HDAC4-217ENST00000553145 ENTPD3O75355 529 aa22.95■■□□□ 1.26
HDAC4-217ENST00000553145 LAMB1P07942 1786 aa22.95■■□□□ 1.26
HDAC4-217ENST00000553145 IFIT2P09913 472 aaKnown RBP22.95■■□□□ 1.26
HDAC4-217ENST00000553145 VGLL4Q14135 290 aa22.95■■□□□ 1.26
HDAC4-217ENST00000553145 NAA16Q6N069 864 aaPredicted RBP22.95■■□□□ 1.26
HDAC4-217ENST00000553145 SH3BP5LQ7L8J4 393 aa22.95■■□□□ 1.26
HDAC4-217ENST00000553145 ADGRA1Q86SQ6 560 aa22.95■■□□□ 1.26
HDAC4-217ENST00000553145 RNF186Q9NXI6 227 aa22.95■■□□□ 1.26
HDAC4-217ENST00000553145 DOCK2Q92608 1830 aa22.94■■□□□ 1.26
HDAC4-217ENST00000553145 SMARCA5O60264 1052 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-217ENST00000553145 MAP3K9P80192 1104 aa22.94■■□□□ 1.26
HDAC4-217ENST00000553145 PICALMQ13492 652 aa22.94■■□□□ 1.26
HDAC4-217ENST00000553145 MIGA2Q7L4E1 593 aa22.94■■□□□ 1.26
HDAC4-217ENST00000553145 REM2Q8IYK8 340 aaPredicted RBP22.94■■□□□ 1.26
HDAC4-217ENST00000553145 ATRNL1Q5VV63 1379 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 TRPA1O75762 1119 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 ZBTB48P10074 688 aaPredicted RBP22.93■■□□□ 1.26
HDAC4-217ENST00000553145 CNKSR2Q8WXI2 1034 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 HOOK2Q96ED9 719 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 WRNIP1Q96S55 665 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 LRRCC1Q9C099 1032 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 DCTPP1Q9H773 170 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 SAGE1Q9NXZ1 904 aa22.93■■□□□ 1.26
HDAC4-217ENST00000553145 TM4SF4P48230 202 aa22.92■■□□□ 1.26
HDAC4-217ENST00000553145 DCAF15Q66K64 600 aa22.92■■□□□ 1.26
HDAC4-217ENST00000553145 SNCAIPQ9Y6H5 919 aa22.92■■□□□ 1.26
HDAC4-217ENST00000553145 AK9Q5TCS8 1911 aa22.92■■□□□ 1.26
HDAC4-217ENST00000553145 DDTLA6NHG4 134 aaPredicted RBP22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms