RNA–Protein interactions for RNA: ENST00000553116.5

RAB5B-210, Transcript of RAB5B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5B, Length 3,322 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-210ENST00000553116 GPHNQ9NQX3 736 aaPredicted RBP9.73□□□□□ -0.85
RAB5B-210ENST00000553116 STK32BQ9NY57 414 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 KIF3AQ9Y496 699 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 PPFIA3O75145 1194 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 F13A1P00488 732 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 LDHBP07195 334 aaKnown RBP9.73□□□□□ -0.85
RAB5B-210ENST00000553116 PDE6BP35913 854 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 WDR66Q8TBY9 1149 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 CRAMP1Q96RY5 1269 aa9.73□□□□□ -0.85
RAB5B-210ENST00000553116 CPLX1O14810 134 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 PFKFB2O60825 505 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 ALX1Q15699 326 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 FERMT3Q86UX7 667 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 NSUN4Q96CB9 384 aaKnown RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 CHMP4CQ96CF2 233 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 NOL10Q9BSC4 688 aaKnown RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 GDPD2Q9HCC8 539 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 NEDD4P46934 1319 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 BAZ2AQ9UIF9 1905 aaKnown RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 G3V3G9 751 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 DCAF8Q5TAQ9 597 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 NBPF3Q9H094 633 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 CNNM2Q9H8M5 875 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 ZMYM6O95789 1325 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 PDS5AQ29RF7 1337 aaKnown RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 CACNA1SQ13698 1873 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 RIMBP2O15034 1052 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 FIBPO43427 364 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 KDM4AO75164 1064 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 NPR1P16066 1061 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 HOXA10P31260 410 aaPredicted RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 AKNAD1Q5T1N1 836 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 CRNKL1Q9BZJ0 848 aaKnown RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 KRT23Q9C075 422 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 RNF41Q9H4P4 317 aaPredicted RBP9.72□□□□□ -0.85
RAB5B-210ENST00000553116 INCENPQ9NQS7 918 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 ANKRD31Q8N7Z5 1873 aa9.72□□□□□ -0.85
RAB5B-210ENST00000553116 PTPDC1A2A3K4 754 aa9.71□□□□□ -0.85
RAB5B-210ENST00000553116 PDIA3P30101 505 aaKnown RBP9.71□□□□□ -0.85
RAB5B-210ENST00000553116 ANTXR2P58335 489 aa9.71□□□□□ -0.85
RAB5B-210ENST00000553116 HMGN5P82970 282 aaKnown RBP9.71□□□□□ -0.85
RAB5B-210ENST00000553116 PPARAQ07869 468 aa9.71□□□□□ -0.85
RAB5B-210ENST00000553116 SART3Q15020 963 aaKnown RBP9.71□□□□□ -0.85
RAB5B-210ENST00000553116 TMC4Q7Z404 712 aa9.71□□□□□ -0.85
RAB5B-210ENST00000553116 ZNF274Q96GC6 653 aaPredicted RBP9.71□□□□□ -0.85
RAB5B-210ENST00000553116 ANGEL1Q9UNK9 670 aaKnown RBP9.71□□□□□ -0.85
RAB5B-210ENST00000553116 MTMR6Q9Y217 621 aa9.71□□□□□ -0.85
RAB5B-210ENST00000553116 ERICH2A1L162 156 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 IFIT3O14879 490 aaKnown RBP9.71□□□□□ -0.86
RAB5B-210ENST00000553116 DHX16O60231 1041 aaKnown RBP9.71□□□□□ -0.86
RAB5B-210ENST00000553116 ALDH1B1P30837 517 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 SLC15A2Q16348 729 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 TMEM67Q5HYA8 995 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 CYB5R4Q7L1T6 521 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 CDC37L1Q7L3B6 337 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 TBC1D16Q8TBP0 767 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 RIOK1Q9BRS2 568 aaKnown RBP9.71□□□□□ -0.86
RAB5B-210ENST00000553116 AGXT2Q9BYV1 514 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 CD209Q9NNX6 404 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 LMBRD1Q9NUN5 540 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 SRGNP10124 158 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 PDIA4P13667 645 aaKnown RBP9.71□□□□□ -0.86
RAB5B-210ENST00000553116 KLHL40Q2TBA0 621 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 CAVIN1Q6NZI2 390 aaKnown RBP9.71□□□□□ -0.86
RAB5B-210ENST00000553116 MICU3Q86XE3 530 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 FBXO41Q8TF61 875 aa9.71□□□□□ -0.86
RAB5B-210ENST00000553116 BAG6P46379 1132 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 GSTO1P78417 241 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 SLC4A8Q2Y0W8 1093 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 TDRD7Q8NHU6 1098 aaKnown RBP9.7□□□□□ -0.86
RAB5B-210ENST00000553116 LLPHQ9BRT6 129 aaKnown RBP9.7□□□□□ -0.86
RAB5B-210ENST00000553116 ZNF219Q9P2Y4 722 aaPredicted RBP9.7□□□□□ -0.86
RAB5B-210ENST00000553116 POLLQ9UGP5 575 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 CNPY2Q9Y2B0 182 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 MAST2Q6P0Q8 1798 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 CCDC69A6NI79 296 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 RXRAP19793 462 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 USP5P45974 858 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 DPP8Q6V1X1 898 aaPredicted RBP9.7□□□□□ -0.86
RAB5B-210ENST00000553116 SYNE3Q6ZMZ3 975 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 C2CD5Q86YS7 1000 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 SP8Q8IXZ3 490 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 MPNDQ8N594 471 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 NSUN7Q8NE18 718 aaKnown RBP9.7□□□□□ -0.86
RAB5B-210ENST00000553116 MASTLQ96GX5 879 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 TMEM87BQ96K49 555 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 ZKSCAN3Q9BRR0 538 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 ZC3H12CQ9C0D7 883 aaKnown RBP9.7□□□□□ -0.86
RAB5B-210ENST00000553116 WDR19Q8NEZ3 1342 aa9.7□□□□□ -0.86
RAB5B-210ENST00000553116 CYP2D7A0A087X1C5 515 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 METAP2P50579 478 aaKnown RBP eCLIP9.69□□□□□ -0.86
RAB5B-210ENST00000553116 DIXDC1Q155Q3 683 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 CPLX2Q6PUV4 134 aaKnown RBP9.69□□□□□ -0.86
RAB5B-210ENST00000553116 CCDC144CPQ8IYA2 1237 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 ZNF384Q8TF68 577 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 UBAC1Q9BSL1 405 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 ATP6V0A2Q9Y487 856 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 RGPD3A6NKT7 1758 aaPredicted RBP9.69□□□□□ -0.86
RAB5B-210ENST00000553116 RGPD4Q7Z3J3 1758 aa9.69□□□□□ -0.86
RAB5B-210ENST00000553116 H0YIN7 160 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms