RNA–Protein interactions for RNA: ENST00000553065.1

DDX23-217, Transcript of DEAD-box helicase 23, humanhuman

TSL 2

Gene DDX23, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX23-217ENST00000553065 ZKSCAN4Q969J2 545 aaPredicted RBP13.14□□□□□ -0.31
DDX23-217ENST00000553065 XAGE2Q96GT9 111 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 HPS5Q9UPZ3 1129 aa13.14□□□□□ -0.31
DDX23-217ENST00000553065 BRCA2P51587 3418 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 OTOFQ9HC10 1997 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 LAMB1P07942 1786 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 FKTNO75072 461 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 CRHR2Q13324 411 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 POLA2Q14181 598 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 FAM43AQ8N2R8 423 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 FAM151AQ8WW52 585 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 ZNF112Q9UJU3 913 aa13.13□□□□□ -0.31
DDX23-217ENST00000553065 ZBTB7BO15156 539 aaPredicted RBP13.12□□□□□ -0.31
DDX23-217ENST00000553065 IPO8O15397 1037 aaKnown RBP13.12□□□□□ -0.31
DDX23-217ENST00000553065 GNAI2P04899 355 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 INPP5BP32019 993 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 TNNI2P48788 182 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 HNRNPUQ00839 825 aaKnown RBP eCLIP13.12□□□□□ -0.31
DDX23-217ENST00000553065 MOGSQ13724 837 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 PI16Q6UXB8 463 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 FAM163AQ96GL9 167 aaPredicted RBP13.12□□□□□ -0.31
DDX23-217ENST00000553065 USP40Q9NVE5 1235 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 HMG20BQ9P0W2 317 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 DENND2AQ9ULE3 1009 aa13.12□□□□□ -0.31
DDX23-217ENST00000553065 ATRNL1Q5VV63 1379 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 SPDYE5A6NIY4 337 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 IRF6O14896 467 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 SEMA3EO15041 775 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 ALDH1A1P00352 501 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 LDHBP07195 334 aaKnown RBP13.11□□□□□ -0.31
DDX23-217ENST00000553065 SOX10P56693 466 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 ATP8B2P98198 1209 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 MAP3K10Q02779 954 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 MLLT1Q03111 559 aaPredicted RBP13.11□□□□□ -0.31
DDX23-217ENST00000553065 TCP10Q12799 353 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 TBC1D9Q6ZT07 1266 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 DDX4Q9NQI0 724 aaKnown RBP13.11□□□□□ -0.31
DDX23-217ENST00000553065 MKI67P46013 3256 aaKnown RBP13.11□□□□□ -0.31
DDX23-217ENST00000553065 GAKO14976 1311 aa13.11□□□□□ -0.31
DDX23-217ENST00000553065 PHF20L1A8MW92 1017 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 WDHD1O75717 1129 aaPredicted RBP13.1□□□□□ -0.31
DDX23-217ENST00000553065 RHBDL3P58872 404 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 ZKSCAN2Q63HK3 967 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 OTOP1Q7RTM1 612 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 SSH3Q8TE77 659 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 C1orf115Q9H7X2 142 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 HDAC5Q9UQL6 1122 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 MAST3O60307 1309 aa13.1□□□□□ -0.31
DDX23-217ENST00000553065 CCL15-CCL14A0A0B4J2E2 113 aa13.09□□□□□ -0.31
DDX23-217ENST00000553065 DDTLA6NHG4 134 aaPredicted RBP13.09□□□□□ -0.31
DDX23-217ENST00000553065 PKN2Q16513 984 aaKnown RBP13.09□□□□□ -0.31
DDX23-217ENST00000553065 CCL15Q16663 113 aa13.09□□□□□ -0.31
DDX23-217ENST00000553065 FBXO46Q6PJ61 603 aaPredicted RBP13.09□□□□□ -0.31
DDX23-217ENST00000553065 OTUD5Q96G74 571 aa13.09□□□□□ -0.31
DDX23-217ENST00000553065 NEUROD6Q96NK8 337 aa13.09□□□□□ -0.31
DDX23-217ENST00000553065 WRNIP1Q96S55 665 aa13.09□□□□□ -0.31
DDX23-217ENST00000553065 IDI2Q9BXS1 227 aa13.09□□□□□ -0.31
DDX23-217ENST00000553065 GNL3LQ9NVN8 582 aaKnown RBP13.09□□□□□ -0.31
DDX23-217ENST00000553065 PDS5AQ29RF7 1337 aaKnown RBP13.09□□□□□ -0.31
DDX23-217ENST00000553065 RFX7Q2KHR2 1363 aa13.08□□□□□ -0.31
DDX23-217ENST00000553065 RPAP1Q9BWH6 1393 aaPredicted RBP13.08□□□□□ -0.31
DDX23-217ENST00000553065 GPR75-ASB3A0A0A6YYF3 556 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 BTBD19C9JJ37 291 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 MCAMP43121 646 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 RGS3P49796 1198 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 MECOMQ03112 1051 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 ERO1BQ86YB8 467 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 CD99L2Q8TCZ2 262 aa13.08□□□□□ -0.32
DDX23-217ENST00000553065 NSUN4Q96CB9 384 aaKnown RBP13.08□□□□□ -0.32
DDX23-217ENST00000553065 CTGFP29279 349 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 ARID4AP29374 1257 aaPredicted RBP13.07□□□□□ -0.32
DDX23-217ENST00000553065 GTF2A2P52657 109 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 ZNF341Q9BYN7 854 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 ABCF2Q9UG63 623 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 AKAP2Q9Y2D5 859 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 PTPN22Q9Y2R2 807 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 NOP58Q9Y2X3 529 aaKnown RBP13.07□□□□□ -0.32
DDX23-217ENST00000553065 TRIM17Q9Y577 477 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 CSADQ9Y600 493 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 MYH13Q9UKX3 1938 aa13.07□□□□□ -0.32
DDX23-217ENST00000553065 SP3Q02447 781 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 G3BP1Q13283 466 aaKnown RBP eCLIP13.06□□□□□ -0.32
DDX23-217ENST00000553065 PPIL2Q13356 520 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 RRP1BQ14684 758 aaKnown RBP13.06□□□□□ -0.32
DDX23-217ENST00000553065 GPAT2Q6NUI2 795 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 SPATA5Q8NB90 893 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 PANK1Q8TE04 598 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 DBNDD2Q9BQY9 259 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 TMOD2Q9NZR1 351 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 KCNH4Q9UQ05 1017 aa13.06□□□□□ -0.32
DDX23-217ENST00000553065 MYH2Q9UKX2 1941 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 ENTPD3O75355 529 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 BTDP43251 543 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 PPATQ06203 517 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 MVPQ14764 893 aaKnown RBP13.05□□□□□ -0.32
DDX23-217ENST00000553065 TNNI3KQ59H18 835 aa13.05□□□□□ -0.32
DDX23-217ENST00000553065 NOL9Q5SY16 702 aaKnown RBP13.05□□□□□ -0.32
DDX23-217ENST00000553065 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.05□□□□□ -0.32
DDX23-217ENST00000553065 EAF2Q96CJ1 260 aaPredicted RBP13.05□□□□□ -0.32
DDX23-217ENST00000553065 ARHGAP39Q9C0H5 1083 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms