RNA–Protein interactions for RNA: ENST00000553055.1

PFKM-231, Transcript of phosphofructokinase, muscle, human

TSL 5

Gene PFKM, Length 289 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PFKM-231	ENST00000553055	CHST12	Q9NRB3	414 aa		9.25	□□□□□ -0.93
PFKM-231	ENST00000553055	ZNRF3	Q9ULT6	936 aa		9.25	□□□□□ -0.93
PFKM-231	ENST00000553055	TLR3	O15455	904 aa	Known RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	EDN3	P14138	238 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	MAN1A1	P33908	653 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	RPS26	P62854	115 aa	Known RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	PIN1	Q13526	163 aa	Predicted RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	MPP2	Q14168	576 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	TRIP4	Q15650	581 aa	Predicted RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	GFOD2	Q3B7J2	385 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	C10orf62	Q5T681	223 aa	Predicted RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	TPTE2	Q6XPS3	522 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	AGMO	Q6ZNB7	445 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	TRIM42	Q8IWZ5	723 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	ZNF295-AS1	Q8N0V1	137 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	REXO1	Q8N1G1	1221 aa	Known RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	AFAP1L2	Q8N4X5	818 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	UBR7	Q8N806	425 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	TNKS2	Q9H2K2	1166 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	CASS4	Q9NQ75	786 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	PGPEP1	Q9NXJ5	209 aa		9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	RTCB	Q9Y3I0	505 aa	Known RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	GPC6	Q9Y625	555 aa	Predicted RBP	9.24	□□□□□ -0.93
PFKM-231	ENST00000553055	KIAA0586	Q9BVV6	1533 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	KATNA1	O75449	491 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	LIG1	P18858	919 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	CES1	P23141	567 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	VEGFB	P49765	207 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	GRAMD1B	Q3KR37	738 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	NXN	Q6DKJ4	435 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	TTBK2	Q6IQ55	1244 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	MAMSTR	Q6ZN01	415 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	EEPD1	Q7L9B9	569 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	LSR	Q86X29	649 aa	Predicted RBP	9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	TCEAL8	Q8IYN2	117 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	IFNL3	Q8IZI9	196 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	FAM9B	Q8IZU0	186 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	C19orf47	Q8N9M1	422 aa	Known RBP	9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	RBBP8NL	Q8NC74	664 aa	Predicted RBP	9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	CDK15	Q96Q40	435 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	FHDC1	Q9C0D6	1143 aa	Predicted RBP	9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	CDH19	Q9H159	772 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	SCUBE2	Q9NQ36	999 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	ENAM	Q9NRM1	1142 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	ABI2	Q9NYB9	513 aa	Predicted RBP	9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	INTU	Q9ULD6	942 aa		9.23	□□□□□ -0.93
PFKM-231	ENST00000553055	TMEM238L	A0A1B0GVL6	79 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055		A0A1W2PP55	124 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	CELA3A	P09093	270 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	IFIT2	P09913	472 aa	Known RBP	9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	EPB42	P16452	691 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	TFE3	P19532	575 aa	Predicted RBP	9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	CENPC	Q03188	943 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	MORC3	Q14149	939 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	VARS2	Q5ST30	1063 aa	Known RBP	9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	PASD1	Q8IV76	773 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	FAM178B	Q8IXR5	827 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	LRRC47	Q8N1G4	583 aa	Known RBP	9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	C1orf127	Q8N9H9	656 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	RHBDD1	Q8TEB9	315 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	CAMKK2	Q96RR4	588 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	RUSC1	Q9BVN2	902 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	ANKIB1	Q9P2G1	1089 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	RPS6KL1	Q9Y6S9	549 aa		9.22	□□□□□ -0.93
PFKM-231	ENST00000553055	RUSC2	Q8N2Y8	1516 aa		9.21	□□□□□ -0.93
PFKM-231	ENST00000553055	IQCA1L	A6NCM1	817 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	GSG1L2	A8MUP6	293 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	EXOC5	O00471	708 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	TXLNA	P40222	546 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	MLC1	Q15049	377 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	NBPF1	Q3BBV0	1214 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	FAM102B	Q5T8I3	360 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	TMEM214	Q6NUQ4	689 aa	Known RBP	9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	C6orf15	Q6UXA7	325 aa	Predicted RBP	9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	ZBTB46	Q86UZ6	589 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	GATAD2B	Q8WXI9	593 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	E2F7	Q96AV8	911 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	NLRP3	Q96P20	1036 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	KIF2C	Q99661	725 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	SMAD5	Q99717	465 aa	Known RBP	9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	SPATA9	Q9BWV2	254 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	AASDHPPT	Q9NRN7	309 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	KCNMB2	Q9Y691	235 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	PTPRG	P23470	1445 aa		9.21	□□□□□ -0.94
PFKM-231	ENST00000553055	TBX3	O15119	743 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	F13A1	P00488	732 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	FAM153B	P0C7A2	387 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	ADD1	P35611	737 aa	Known RBP	9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	PURA	Q00577	322 aa	Known RBP	9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	MAPRE1	Q15691	268 aa	Known RBP	9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	HGSNAT	Q68CP4	663 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	SP7	Q8TDD2	431 aa	Predicted RBP	9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	CHMP4C	Q96CF2	233 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	MTMR8	Q96EF0	704 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	SUSD3	Q96L08	255 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	MIR1-1HG	Q9H1L0	117 aa		9.2	□□□□□ -0.94
PFKM-231	ENST00000553055	ABCB6	Q9NP58	842 aa		9.2	□□□□□ -0.94

Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms