RNA–Protein interactions for RNA: ENST00000552985.5

TPCN1-223, Transcript of two pore segment channel 1, human

TSL 3

Gene TPCN1, Length 762 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TPCN1-223	ENST00000552985	NDUFB9	Q9Y6M9	179 aa		13.79	□□□□□ -0.2
TPCN1-223	ENST00000552985	AK9	Q5TCS8	1911 aa		13.79	□□□□□ -0.2
TPCN1-223	ENST00000552985	OTOF	Q9HC10	1997 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	SLC10A3	P09131	477 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	NFIA	Q12857	509 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	RASAL3	Q86YV0	1011 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	NSUN4	Q96CB9	384 aa	Known RBP	13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	PIH1D3	Q9NQM4	214 aa	Known RBP	13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	USP40	Q9NVE5	1235 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	WBP1L	Q9NX94	342 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	TMOD2	Q9NZR1	351 aa		13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	ANGEL1	Q9UNK9	670 aa	Known RBP	13.78	□□□□□ -0.2
TPCN1-223	ENST00000552985	MROH7-TTC4	A0A0A0MT08	1334 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	FOXN1	O15353	648 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	SMARCA5	O60264	1052 aa	Predicted RBP	13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	MAP2K2	P36507	400 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	TNNI2	P48788	182 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	TCP10	Q12799	353 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	SUPT20HL1	Q3ZLR7	823 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	LDLRAD1	Q5T700	205 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	FKBP1C	Q5VVH2	108 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	MAST2	Q6P0Q8	1798 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	ARMC9	Q7Z3E5	817 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	CLASRP	Q8N2M8	674 aa	Known RBP	13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	CCDC102A	Q96A19	550 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	FAM163A	Q96GL9	167 aa	Predicted RBP	13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	RAI14	Q9P0K7	980 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	LRP2BP	Q9P2M1	347 aa		13.77	□□□□□ -0.21
TPCN1-223	ENST00000552985	USP2	O75604	605 aa	Predicted RBP	13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	BTD	P43251	543 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	NOG	Q13253	232 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	MAP3K11	Q16584	847 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	FAM83A	Q86UY5	434 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	CLMN	Q96JQ2	1002 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	DCTPP1	Q9H773	170 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	FAM198A	Q9UFP1	575 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	DOCK2	Q92608	1830 aa		13.76	□□□□□ -0.21
TPCN1-223	ENST00000552985	RFX7	Q2KHR2	1363 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	GPR75-ASB3	A0A0A6YYF3	556 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	PPP1R12B	O60237	982 aa	Predicted RBP	13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	IFIT2	P09913	472 aa	Known RBP	13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	RHBDL3	P58872	404 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	KIF23	Q02241	960 aa	Predicted RBP	13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	MAP2K1	Q02750	393 aa	Predicted RBP	13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	ZFPM1	Q8IX07	1006 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	SLF2	Q8IX21	1173 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	LRRCC1	Q9C099	1032 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	ANTXR1	Q9H6X2	564 aa		13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	13.75	□□□□□ -0.21
TPCN1-223	ENST00000552985	CDK5RAP2	Q96SN8	1893 aa		13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	WDHD1	O75717	1129 aa	Predicted RBP	13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	RGS3	P49796	1198 aa		13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	GSTO1	P78417	241 aa		13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	MKRN3	Q13064	507 aa	Known RBP	13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	ADGRA1	Q86SQ6	560 aa		13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	FAM151A	Q8WW52	585 aa		13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	DDX4	Q9NQI0	724 aa	Known RBP	13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.74	□□□□□ -0.21
TPCN1-223	ENST00000552985	RPAP1	Q9BWH6	1393 aa	Predicted RBP	13.73	□□□□□ -0.21
TPCN1-223	ENST00000552985	LDHC	P07864	332 aa		13.73	□□□□□ -0.21
TPCN1-223	ENST00000552985	IREB2	P48200	963 aa	Known RBP	13.73	□□□□□ -0.21
TPCN1-223	ENST00000552985	NAA16	Q6N069	864 aa	Predicted RBP	13.73	□□□□□ -0.21
TPCN1-223	ENST00000552985	AIDA	Q96BJ3	306 aa		13.73	□□□□□ -0.21
TPCN1-223	ENST00000552985	IDI2	Q9BXS1	227 aa		13.73	□□□□□ -0.21
TPCN1-223	ENST00000552985	IDH1	O75874	414 aa	Known RBP	13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	MIGA2	Q7L4E1	593 aa		13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	SH3BP5L	Q7L8J4	393 aa		13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	EXOC6	Q8TAG9	804 aa		13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	EDC3	Q96F86	508 aa	Known RBP	13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	CSRNP1	Q96S65	589 aa		13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	TSKS	Q9UJT2	592 aa		13.72	□□□□□ -0.21
TPCN1-223	ENST00000552985	ENTPD3	O75355	529 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	SLURP2	P0DP57	97 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	HSPA8	P11142	646 aa	Known RBP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	GJA5	P36382	358 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	CTCF	P49711	727 aa	Predicted RBP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	PICALM	Q13492	652 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	SPRYD7	Q5W111	196 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	ANKRD13A	Q8IZ07	590 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	SH3RF3	Q8TEJ3	882 aa	Predicted RBP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	SLC10A4	Q96EP9	437 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	DNAJC2	Q99543	621 aa	Known RBP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	BOLA2	Q9H3K6	86 aa		13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	AATF	Q9NY61	560 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
TPCN1-223	ENST00000552985	FOCAD	Q5VW36	1801 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	DDTL	A6NHG4	134 aa	Predicted RBP	13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	GOLIM4	O00461	696 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	ATP5J	P18859	108 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	CYP7A1	P22680	504 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	LBX1	P52954	281 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	MAP3K9	P80192	1104 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	VGLL4	Q14135	290 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	COL13A1	Q5TAT6	717 aa	Predicted RBP	13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	MAGEB6	Q8N7X4	407 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	CNKSR2	Q8WXI2	1034 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	WNK4	Q96J92	1243 aa		13.7	□□□□□ -0.22
TPCN1-223	ENST00000552985	BEGAIN	Q9BUH8	593 aa		13.7	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms