RNA–Protein interactions for RNA: ENST00000552917.1

RFX4-212, Transcript of regulatory factor X4, humanhuman

TSL 4

Gene RFX4, Length 594 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-212ENST00000552917 TRPA1O75762 1119 aa15.05■□□□□ -0
RFX4-212ENST00000552917 MKRN3Q13064 507 aaKnown RBP15.05■□□□□ -0
RFX4-212ENST00000552917 CCDC158Q5M9N0 1113 aa15.05■□□□□ -0
RFX4-212ENST00000552917 SPRYD7Q5W111 196 aa15.05■□□□□ -0
RFX4-212ENST00000552917 ERICH6Q7L0X2 663 aa15.05■□□□□ -0
RFX4-212ENST00000552917 ERC1Q8IUD2 1116 aa15.05■□□□□ -0
RFX4-212ENST00000552917 RPAP2Q8IXW5 612 aaPredicted RBP15.05■□□□□ -0
RFX4-212ENST00000552917 ANKRD13AQ8IZ07 590 aa15.05■□□□□ -0
RFX4-212ENST00000552917 HOOK2Q96ED9 719 aa15.05■□□□□ -0
RFX4-212ENST00000552917 DBNDD2Q9BQY9 259 aa15.05■□□□□ -0
RFX4-212ENST00000552917 GAKO14976 1311 aa15.04■□□□□ -0
RFX4-212ENST00000552917 MCAMP43121 646 aa15.04■□□□□ -0
RFX4-212ENST00000552917 TM4SF4P48230 202 aa15.04■□□□□ -0
RFX4-212ENST00000552917 SREBF2Q12772 1141 aa15.04■□□□□ -0
RFX4-212ENST00000552917 HSP90AB4PQ58FF6 505 aa15.04■□□□□ -0
RFX4-212ENST00000552917 TTC39AQ5SRH9 613 aa15.04■□□□□ -0
RFX4-212ENST00000552917 PI16Q6UXB8 463 aa15.04■□□□□ -0
RFX4-212ENST00000552917 FAM151AQ8WW52 585 aa15.04■□□□□ -0
RFX4-212ENST00000552917 FAM163AQ96GL9 167 aaPredicted RBP15.04■□□□□ -0
RFX4-212ENST00000552917 USP40Q9NVE5 1235 aa15.04■□□□□ -0
RFX4-212ENST00000552917 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.04■□□□□ -0
RFX4-212ENST00000552917 EXOC6BQ9Y2D4 811 aa15.04■□□□□ -0
RFX4-212ENST00000552917 RPAP1Q9BWH6 1393 aaPredicted RBP15.03■□□□□ -0
RFX4-212ENST00000552917 HMMRO75330 724 aa15.03■□□□□ -0
RFX4-212ENST00000552917 ZBTB48P10074 688 aaPredicted RBP15.03■□□□□ -0
RFX4-212ENST00000552917 MECOMQ03112 1051 aa15.03■□□□□ -0
RFX4-212ENST00000552917 C20orf194Q5TEA3 1177 aa15.03■□□□□ -0
RFX4-212ENST00000552917 TBC1D9Q6ZT07 1266 aa15.03■□□□□ -0
RFX4-212ENST00000552917 WNK4Q96J92 1243 aa15.03■□□□□ -0
RFX4-212ENST00000552917 ZNF512BQ96KM6 892 aaPredicted RBP15.03■□□□□ -0
RFX4-212ENST00000552917 INHBEP58166 350 aa15.02■□□□□ -0
RFX4-212ENST00000552917 GSTO1P78417 241 aa15.02■□□□□ -0
RFX4-212ENST00000552917 MAP3K9P80192 1104 aa15.02■□□□□ -0
RFX4-212ENST00000552917 TCP10Q12799 353 aa15.02■□□□□ -0
RFX4-212ENST00000552917 NFIAQ12857 509 aa15.02■□□□□ -0
RFX4-212ENST00000552917 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.02■□□□□ -0
RFX4-212ENST00000552917 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.02■□□□□ -0
RFX4-212ENST00000552917 EAF2Q96CJ1 260 aaPredicted RBP15.02■□□□□ -0
RFX4-212ENST00000552917 RAI14Q9P0K7 980 aa15.02■□□□□ -0
RFX4-212ENST00000552917 DBNLQ9UJU6 430 aaKnown RBP15.02■□□□□ -0
RFX4-212ENST00000552917 MROH7-TTC4A0A0A0MT08 1334 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 MANSC4A6NHS7 340 aaPredicted RBP15.01□□□□□ -0.01
RFX4-212ENST00000552917 LDHCP07864 332 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 DCAF15Q66K64 600 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 SIRT2Q8IXJ6 389 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 NSUN4Q96CB9 384 aaKnown RBP15.01□□□□□ -0.01
RFX4-212ENST00000552917 IDI2Q9BXS1 227 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 CCDC8Q9H0W5 538 aaPredicted RBP15.01□□□□□ -0.01
RFX4-212ENST00000552917 ELP3Q9H9T3 547 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 SNRKQ9NRH2 765 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 TLR7Q9NYK1 1049 aaKnown RBP15.01□□□□□ -0.01
RFX4-212ENST00000552917 LRP2BPQ9P2M1 347 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 FAM198AQ9UFP1 575 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 CSADQ9Y600 493 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 MYH13Q9UKX3 1938 aa15.01□□□□□ -0.01
RFX4-212ENST00000552917 GPR75-ASB3A0A0A6YYF3 556 aa15□□□□□ -0.01
RFX4-212ENST00000552917 ENTPD3O75355 529 aa15□□□□□ -0.01
RFX4-212ENST00000552917 BTDP43251 543 aa15□□□□□ -0.01
RFX4-212ENST00000552917 VGLL4Q14135 290 aa15□□□□□ -0.01
RFX4-212ENST00000552917 AACSQ86V21 672 aa15□□□□□ -0.01
RFX4-212ENST00000552917 RHPN1Q8TCX5 695 aa15□□□□□ -0.01
RFX4-212ENST00000552917 ZNF384Q8TF68 577 aa15□□□□□ -0.01
RFX4-212ENST00000552917 GJA5P36382 358 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 RGS3P49796 1198 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 MIGA2Q7L4E1 593 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 ZFPM1Q8IX07 1006 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 KIF1BPQ96EK5 621 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 WRNIP1Q96S55 665 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 ZNF341Q9BYN7 854 aa14.99□□□□□ -0.01
RFX4-212ENST00000552917 IGSF3O75054 1194 aa14.98□□□□□ -0.01
RFX4-212ENST00000552917 RAB11FIP3O75154 756 aa14.98□□□□□ -0.01
RFX4-212ENST00000552917 WDHD1O75717 1129 aaPredicted RBP14.98□□□□□ -0.01
RFX4-212ENST00000552917 MAP4K4O95819 1239 aaPredicted RBP14.98□□□□□ -0.01
RFX4-212ENST00000552917 ALDH1A1P00352 501 aa14.98□□□□□ -0.01
RFX4-212ENST00000552917 CYP2E1P05181 493 aaPredicted RBP14.98□□□□□ -0.01
RFX4-212ENST00000552917 ZAP70P43403 619 aa14.98□□□□□ -0.01
RFX4-212ENST00000552917 IL1RAPL2Q9NP60 686 aa14.98□□□□□ -0.01
RFX4-212ENST00000552917 APBB1O00213 710 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 CAPN15O75808 1086 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 TBC1D8O95759 1140 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 RHBDL3P58872 404 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 NAA16Q6N069 864 aaPredicted RBP14.97□□□□□ -0.01
RFX4-212ENST00000552917 ERO1BQ86YB8 467 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 IFNL1Q8IU54 200 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 CLASRPQ8N2M8 674 aaKnown RBP14.97□□□□□ -0.01
RFX4-212ENST00000552917 CNKSR2Q8WXI2 1034 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 ZKSCAN4Q969J2 545 aaPredicted RBP14.97□□□□□ -0.01
RFX4-212ENST00000552917 YTHDC1Q96MU7 727 aaKnown RBP14.97□□□□□ -0.01
RFX4-212ENST00000552917 CFHR5Q9BXR6 569 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
RFX4-212ENST00000552917 TESPA1A2RU30 521 aaPredicted RBP14.96□□□□□ -0.01
RFX4-212ENST00000552917 SPDYE5A6NIY4 337 aa14.96□□□□□ -0.01
RFX4-212ENST00000552917 NPM3O75607 178 aaKnown RBP14.96□□□□□ -0.01
RFX4-212ENST00000552917 PICALMQ13492 652 aa14.96□□□□□ -0.01
RFX4-212ENST00000552917 NOM1Q5C9Z4 860 aaKnown RBP14.96□□□□□ -0.01
RFX4-212ENST00000552917 OTUD7BQ6GQQ9 843 aa14.96□□□□□ -0.01
RFX4-212ENST00000552917 ZSCAN29Q8IWY8 852 aaPredicted RBP14.96□□□□□ -0.01
RFX4-212ENST00000552917 OTUD5Q96G74 571 aa14.96□□□□□ -0.01
RFX4-212ENST00000552917 MS4A4AQ96JQ5 239 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms