RNA–Protein interactions for RNA: ENST00000552465.1

CACNB3-222, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 557 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-222ENST00000552465 ZNF341Q9BYN7 854 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 BICC1Q9H694 974 aaKnown RBP21.28■■□□□ 1
CACNB3-222ENST00000552465 SRRDQ9UH36 339 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 CENPFP49454 3210 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 MAST3O60307 1309 aa21.28■■□□□ 1
CACNB3-222ENST00000552465 INPP5BP32019 993 aa21.27■■□□□ 1
CACNB3-222ENST00000552465 ANKRD44Q8N8A2 993 aa21.27■■□□□ 1
CACNB3-222ENST00000552465 TRIM47Q96LD4 638 aa21.27■■□□□ 1
CACNB3-222ENST00000552465 RPAP1Q9BWH6 1393 aaPredicted RBP21.26■□□□□ 0.99
CACNB3-222ENST00000552465 PDHXO00330 501 aa21.26■□□□□ 0.99
CACNB3-222ENST00000552465 HOXD10P28358 340 aa21.26■□□□□ 0.99
CACNB3-222ENST00000552465 CHRDL2Q6WN34 429 aa21.26■□□□□ 0.99
CACNB3-222ENST00000552465 DPF3Q92784 378 aa21.26■□□□□ 0.99
CACNB3-222ENST00000552465 ZNF112Q9UJU3 913 aa21.26■□□□□ 0.99
CACNB3-222ENST00000552465 ZSWIM8A7E2V4 1837 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 FMNL1O95466 1100 aaPredicted RBP21.25■□□□□ 0.99
CACNB3-222ENST00000552465 OSBPP22059 807 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 NKX2-3Q8TAU0 364 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 FAM151AQ8WW52 585 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 MRS2Q9HD23 443 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 KCNH4Q9UQ05 1017 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 ADGRA2Q96PE1 1338 aa21.25■□□□□ 0.99
CACNB3-222ENST00000552465 GRK4P32298 578 aa21.24■□□□□ 0.99
CACNB3-222ENST00000552465 RAET1EQ8TD07 263 aa21.24■□□□□ 0.99
CACNB3-222ENST00000552465 BRCA2P51587 3418 aa21.24■□□□□ 0.99
CACNB3-222ENST00000552465 IFIT1P09914 478 aaKnown RBP21.23■□□□□ 0.99
CACNB3-222ENST00000552465 FGFR2P21802 821 aa21.23■□□□□ 0.99
CACNB3-222ENST00000552465 MOGSQ13724 837 aa21.23■□□□□ 0.99
CACNB3-222ENST00000552465 KLHDC4Q8TBB5 520 aa21.23■□□□□ 0.99
CACNB3-222ENST00000552465 RBM27Q9P2N5 1060 aaKnown RBP21.23■□□□□ 0.99
CACNB3-222ENST00000552465 KIF16BQ96L93 1317 aa21.23■□□□□ 0.99
CACNB3-222ENST00000552465 GJB1P08034 283 aa21.22■□□□□ 0.99
CACNB3-222ENST00000552465 GJA8P48165 433 aa21.22■□□□□ 0.99
CACNB3-222ENST00000552465 PUM3Q15397 648 aaKnown RBP21.22■□□□□ 0.99
CACNB3-222ENST00000552465 UBE2Q1Q7Z7E8 422 aa21.22■□□□□ 0.99
CACNB3-222ENST00000552465 MYPNQ86TC9 1320 aa21.22■□□□□ 0.99
CACNB3-222ENST00000552465 CCL5P13501 91 aa21.21■□□□□ 0.99
CACNB3-222ENST00000552465 TCP10Q12799 353 aa21.21■□□□□ 0.99
CACNB3-222ENST00000552465 WDR66Q8TBY9 1149 aa21.21■□□□□ 0.99
CACNB3-222ENST00000552465 NOL9Q5SY16 702 aaKnown RBP21.2■□□□□ 0.98
CACNB3-222ENST00000552465 CDC42EP5Q6NZY7 148 aa21.2■□□□□ 0.98
CACNB3-222ENST00000552465 HTATIP2Q9BUP3 242 aa21.2■□□□□ 0.98
CACNB3-222ENST00000552465 RNF208Q9H0X6 261 aa21.2■□□□□ 0.98
CACNB3-222ENST00000552465 BIN2Q9UBW5 565 aaPredicted RBP21.2■□□□□ 0.98
CACNB3-222ENST00000552465 DAGLAQ9Y4D2 1042 aa21.2■□□□□ 0.98
CACNB3-222ENST00000552465 BCRP11274 1271 aa21.19■□□□□ 0.98
CACNB3-222ENST00000552465 UBXN2AP68543 259 aa21.19■□□□□ 0.98
CACNB3-222ENST00000552465 NFIAQ12857 509 aa21.19■□□□□ 0.98
CACNB3-222ENST00000552465 GPAT2Q6NUI2 795 aa21.19■□□□□ 0.98
CACNB3-222ENST00000552465 PARK7Q99497 189 aaKnown RBP21.19■□□□□ 0.98
CACNB3-222ENST00000552465 CXCL11O14625 94 aa21.18■□□□□ 0.98
CACNB3-222ENST00000552465 FCGRTP55899 365 aa21.18■□□□□ 0.98
CACNB3-222ENST00000552465 PRKCZQ05513 592 aa21.18■□□□□ 0.98
CACNB3-222ENST00000552465 DIXDC1Q155Q3 683 aa21.18■□□□□ 0.98
CACNB3-222ENST00000552465 TRIOBPQ9H2D6 2365 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 EYA2O00167 538 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 CYP2C8P10632 490 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 SLC5A1P13866 664 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 LPIN2Q92539 896 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 USP44Q9H0E7 712 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 PRO3102Q9H379 93 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 FAM198AQ9UFP1 575 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 NR2E3Q9Y5X4 410 aa21.17■□□□□ 0.98
CACNB3-222ENST00000552465 ZEB1P37275 1124 aaPredicted RBP21.16■□□□□ 0.98
CACNB3-222ENST00000552465 RFX5P48382 616 aaPredicted RBP21.16■□□□□ 0.98
CACNB3-222ENST00000552465 MRPL50Q8N5N7 158 aaKnown RBP21.16■□□□□ 0.98
CACNB3-222ENST00000552465 U2AF1L4Q8WU68 220 aaKnown RBP21.16■□□□□ 0.98
CACNB3-222ENST00000552465 USP40Q9NVE5 1235 aa21.16■□□□□ 0.98
CACNB3-222ENST00000552465 GABRQQ9UN88 632 aa21.16■□□□□ 0.98
CACNB3-222ENST00000552465 PRDX5P30044 214 aa21.15■□□□□ 0.98
CACNB3-222ENST00000552465 ZFPM1Q8IX07 1006 aa21.15■□□□□ 0.98
CACNB3-222ENST00000552465 SLAIN1Q8ND83 568 aa21.15■□□□□ 0.98
CACNB3-222ENST00000552465 UNC93B1Q9H1C4 597 aa21.15■□□□□ 0.98
CACNB3-222ENST00000552465 CEP290O15078 2479 aa21.15■□□□□ 0.98
CACNB3-222ENST00000552465 PHF20L1A8MW92 1017 aa21.14■□□□□ 0.97
CACNB3-222ENST00000552465 ZBTB7BO15156 539 aaPredicted RBP21.14■□□□□ 0.97
CACNB3-222ENST00000552465 FARP2O94887 1054 aaPredicted RBP21.14■□□□□ 0.97
CACNB3-222ENST00000552465 SGPL1O95470 568 aa21.14■□□□□ 0.97
CACNB3-222ENST00000552465 FASTKD5Q7L8L6 764 aaKnown RBP21.14■□□□□ 0.97
CACNB3-222ENST00000552465 ZHX2Q9Y6X8 837 aa21.14■□□□□ 0.97
CACNB3-222ENST00000552465 A0A0G2JLL6 359 aaPredicted RBP21.13■□□□□ 0.97
CACNB3-222ENST00000552465 LDHBP07195 334 aaKnown RBP21.13■□□□□ 0.97
CACNB3-222ENST00000552465 ATG9AQ7Z3C6 839 aa21.13■□□□□ 0.97
CACNB3-222ENST00000552465 PRRT2Q7Z6L0 340 aaPredicted RBP21.13■□□□□ 0.97
CACNB3-222ENST00000552465 PTPRCP08575 1304 aa21.12■□□□□ 0.97
CACNB3-222ENST00000552465 ADCY3O60266 1144 aa21.12■□□□□ 0.97
CACNB3-222ENST00000552465 SCYL3Q8IZE3 742 aa21.12■□□□□ 0.97
CACNB3-222ENST00000552465 PICK1Q9NRD5 415 aa21.12■□□□□ 0.97
CACNB3-222ENST00000552465 GNL3LQ9NVN8 582 aaKnown RBP21.12■□□□□ 0.97
CACNB3-222ENST00000552465 ATRNL1Q5VV63 1379 aa21.11■□□□□ 0.97
CACNB3-222ENST00000552465 SALL1Q9NSC2 1324 aa21.11■□□□□ 0.97
CACNB3-222ENST00000552465 PTPRAP18433 802 aa21.11■□□□□ 0.97
CACNB3-222ENST00000552465 FLT3LGP49771 235 aa21.11■□□□□ 0.97
CACNB3-222ENST00000552465 SLC45A1Q9Y2W3 748 aa21.11■□□□□ 0.97
CACNB3-222ENST00000552465 AFG3L2Q9Y4W6 797 aa21.11■□□□□ 0.97
CACNB3-222ENST00000552465 ENTPD3O75355 529 aa21.1■□□□□ 0.97
CACNB3-222ENST00000552465 RGS3P49796 1198 aa21.1■□□□□ 0.97
CACNB3-222ENST00000552465 MAP3K10Q02779 954 aa21.1■□□□□ 0.97
CACNB3-222ENST00000552465 PXYLP1Q8TE99 480 aa21.1■□□□□ 0.97
CACNB3-222ENST00000552465 IDI2Q9BXS1 227 aa21.1■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms