RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 TTYH1Q9H313 450 aaPredicted RBP13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 KCNH4Q9UQ05 1017 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 FAM205AQ6ZU69 1335 aa13.27□□□□□ -0.29
SLC48A1-209ENST00000552003 IGKV5-2P06315 115 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 CAPN2P17655 700 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 PPATQ06203 517 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 CHRNDQ07001 517 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 C15orf52Q6ZUT6 534 aaKnown RBP13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 ANKLE1Q8NAG6 615 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 USP38Q8NB14 1042 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 SYMPKQ92797 1274 aaKnown RBP13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 C11orf49Q9H6J7 331 aa13.26□□□□□ -0.29
SLC48A1-209ENST00000552003 NEFMP07197 916 aa13.25□□□□□ -0.29
SLC48A1-209ENST00000552003 MAP3K12Q12852 859 aa13.25□□□□□ -0.29
SLC48A1-209ENST00000552003 ZNF697Q5TEC3 545 aa13.25□□□□□ -0.29
SLC48A1-209ENST00000552003 ANKRD2Q9GZV1 360 aa13.25□□□□□ -0.29
SLC48A1-209ENST00000552003 TMEM265A0A087WTH1 108 aa13.24□□□□□ -0.29
SLC48A1-209ENST00000552003 METTL22Q9BUU2 404 aaPredicted RBP13.24□□□□□ -0.29
SLC48A1-209ENST00000552003 SERPINA10Q9UK55 444 aa13.24□□□□□ -0.29
SLC48A1-209ENST00000552003 TTF2Q9UNY4 1162 aaKnown RBP13.24□□□□□ -0.29
SLC48A1-209ENST00000552003 HOXB7P09629 217 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 COL6A1P12109 1028 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 ITGA6P23229 1130 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 TMPOP42166 694 aaKnown RBP13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 GOLGA2Q08379 1002 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 LRRC26Q2I0M4 334 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 TJAP1Q5JTD0 557 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 DUSP27Q5VZP5 1158 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 MIGA2Q7L4E1 593 aa13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 U3KPZ7 1027 aaPredicted RBP13.23□□□□□ -0.29
SLC48A1-209ENST00000552003 MAPK8IP3Q9UPT6 1336 aa13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 ZEB1P37275 1124 aaPredicted RBP13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 IGHMBP2P38935 993 aaKnown RBP13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 CRKP46108 304 aa13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 KCNJ4P48050 445 aa13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 TAOK2Q9UL54 1235 aa13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 OGDHLQ9ULD0 1010 aa13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 LAS1LQ9Y4W2 734 aaKnown RBP13.22□□□□□ -0.29
SLC48A1-209ENST00000552003 PLXNB2O15031 1838 aa13.21□□□□□ -0.29
SLC48A1-209ENST00000552003 TNPO2O14787 897 aaKnown RBP13.21□□□□□ -0.29
SLC48A1-209ENST00000552003 MFSD14BQ5SR56 506 aa13.21□□□□□ -0.29
SLC48A1-209ENST00000552003 PARK7Q99497 189 aaKnown RBP13.21□□□□□ -0.29
SLC48A1-209ENST00000552003 TNNI2P48788 182 aa13.2□□□□□ -0.3
SLC48A1-209ENST00000552003 CWF19L2Q2TBE0 894 aaKnown RBP13.2□□□□□ -0.3
SLC48A1-209ENST00000552003 ZNF112Q9UJU3 913 aa13.2□□□□□ -0.3
SLC48A1-209ENST00000552003 TRIM35Q9UPQ4 493 aa13.2□□□□□ -0.3
SLC48A1-209ENST00000552003 LTBP2Q14767 1821 aa13.2□□□□□ -0.3
SLC48A1-209ENST00000552003 PTPRFP10586 1907 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 AK9Q5TCS8 1911 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 H7C1W4 665 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 CSF1RP07333 972 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 FOSL2P15408 326 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 CASP7P55210 303 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 SHHQ15465 462 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 C9orf50Q5SZB4 431 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 TDRD7Q8NHU6 1098 aaKnown RBP13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 MPHOSPH8Q99549 860 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 GJD2Q9UKL4 321 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 MAP3K2Q9Y2U5 619 aa13.19□□□□□ -0.3
SLC48A1-209ENST00000552003 SYNGAP1Q96PV0 1343 aa13.18□□□□□ -0.3
SLC48A1-209ENST00000552003 MUC6Q6W4X9 2439 aa13.18□□□□□ -0.3
SLC48A1-209ENST00000552003 SAMD1Q6SPF0 538 aaPredicted RBP13.18□□□□□ -0.3
SLC48A1-209ENST00000552003 UBE3BQ7Z3V4 1068 aa13.18□□□□□ -0.3
SLC48A1-209ENST00000552003 ZNF804AQ7Z570 1209 aa13.18□□□□□ -0.3
SLC48A1-209ENST00000552003 ZNF341Q9BYN7 854 aa13.18□□□□□ -0.3
SLC48A1-209ENST00000552003 MAST2Q6P0Q8 1798 aa13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 HMGCRP04035 888 aa13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 FAM83AQ86UY5 434 aa13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 TRIB2Q92519 343 aa13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 HMX1Q9NP08 348 aaPredicted RBP13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 MYO9BQ13459 2157 aa13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 XIRP2A4UGR9 3374 aa13.17□□□□□ -0.3
SLC48A1-209ENST00000552003 PHIPQ8WWQ0 1821 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 NEURL1BA8MQ27 555 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 ELL2O00472 640 aaPredicted RBP13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 CXCL11O14625 94 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 NEUROD2Q15784 382 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 MAP3K21Q5TCX8 1036 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 LHX8Q68G74 356 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 APOBEC3HQ6NTF7 200 aaKnown RBP13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 PLA2G12BQ9BX93 195 aa13.16□□□□□ -0.3
SLC48A1-209ENST00000552003 A0A0G2JLL6 359 aaPredicted RBP13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 PI4KAP2A4QPH2 592 aa13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 GYG1P46976 350 aa13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 NOL9Q5SY16 702 aaKnown RBP13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 PRRT2Q7Z6L0 340 aaPredicted RBP13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 ANKRD13CQ8N6S4 541 aa13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 PI4KAP1Q8N8J0 262 aa13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 MBIPQ9NS73 344 aa13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 REV3LO60673 3130 aa13.15□□□□□ -0.3
SLC48A1-209ENST00000552003 SLURP2P0DP57 97 aa13.14□□□□□ -0.31
SLC48A1-209ENST00000552003 GRIN2CQ14957 1233 aa13.14□□□□□ -0.31
SLC48A1-209ENST00000552003 DCAF15Q66K64 600 aa13.14□□□□□ -0.31
SLC48A1-209ENST00000552003 COA7Q96BR5 231 aa13.14□□□□□ -0.31
SLC48A1-209ENST00000552003 FAM84BQ96KN1 310 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-209ENST00000552003 RPAP1Q9BWH6 1393 aaPredicted RBP13.14□□□□□ -0.31
SLC48A1-209ENST00000552003 TCF20Q9UGU0 1960 aaKnown RBP13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 LMOD3Q0VAK6 560 aa13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 FKBP1CQ5VVH2 108 aa13.13□□□□□ -0.31
SLC48A1-209ENST00000552003 KSR2Q6VAB6 950 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms