RNA–Protein interactions for RNA: ENST00000551966.5

SMARCD1-212, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 5

Gene SMARCD1, Length 881 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-212ENST00000551966 HOOK2Q96ED9 719 aa27.21■■□□□ 1.95
SMARCD1-212ENST00000551966 ZNF341Q9BYN7 854 aa27.21■■□□□ 1.95
SMARCD1-212ENST00000551966 CPA4Q9UI42 421 aa27.21■■□□□ 1.95
SMARCD1-212ENST00000551966 GNRH1P01148 92 aa27.2■■□□□ 1.94
SMARCD1-212ENST00000551966 GOLGA6L2Q8N9W4 650 aaPredicted RBP27.2■■□□□ 1.94
SMARCD1-212ENST00000551966 USP44Q9H0E7 712 aa27.2■■□□□ 1.94
SMARCD1-212ENST00000551966 ZNF112Q9UJU3 913 aa27.2■■□□□ 1.94
SMARCD1-212ENST00000551966 H0YGN5 161 aa27.19■■□□□ 1.94
SMARCD1-212ENST00000551966 PRMT2P55345 433 aa27.19■■□□□ 1.94
SMARCD1-212ENST00000551966 MTFR1Q15390 333 aa27.19■■□□□ 1.94
SMARCD1-212ENST00000551966 FAM151AQ8WW52 585 aa27.19■■□□□ 1.94
SMARCD1-212ENST00000551966 RPAP1Q9BWH6 1393 aaPredicted RBP27.19■■□□□ 1.94
SMARCD1-212ENST00000551966 MAST3O60307 1309 aa27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 KIF16BQ96L93 1317 aa27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 IFIT1P09914 478 aaKnown RBP27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 RFX5P48382 616 aaPredicted RBP27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 MOGSQ13724 837 aa27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 PUM3Q15397 648 aaKnown RBP27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 ANKRD23Q86SG2 305 aa27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 TRIM47Q96LD4 638 aa27.18■■□□□ 1.94
SMARCD1-212ENST00000551966 PSMC4P43686 418 aa27.17■■□□□ 1.94
SMARCD1-212ENST00000551966 SHISA4Q96DD7 197 aa27.17■■□□□ 1.94
SMARCD1-212ENST00000551966 SRRDQ9UH36 339 aa27.17■■□□□ 1.94
SMARCD1-212ENST00000551966 KCNH4Q9UQ05 1017 aa27.17■■□□□ 1.94
SMARCD1-212ENST00000551966 ADGRA2Q96PE1 1338 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 PDHXO00330 501 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 TCP10Q12799 353 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 CDC42EP5Q6NZY7 148 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 FAM9BQ8IZU0 186 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 DAGLAQ9Y4D2 1042 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 ZNF521Q96K83 1311 aa27.16■■□□□ 1.94
SMARCD1-212ENST00000551966 ANP32CO43423 234 aa27.15■■□□□ 1.94
SMARCD1-212ENST00000551966 OSBPP22059 807 aa27.15■■□□□ 1.94
SMARCD1-212ENST00000551966 NFIAQ12857 509 aa27.15■■□□□ 1.94
SMARCD1-212ENST00000551966 DIXDC1Q155Q3 683 aa27.15■■□□□ 1.94
SMARCD1-212ENST00000551966 WDR66Q8TBY9 1149 aa27.15■■□□□ 1.94
SMARCD1-212ENST00000551966 EYA2O00167 538 aa27.14■■□□□ 1.94
SMARCD1-212ENST00000551966 ATG9AQ7Z3C6 839 aa27.13■■□□□ 1.93
SMARCD1-212ENST00000551966 ZFPM1Q8IX07 1006 aa27.13■■□□□ 1.93
SMARCD1-212ENST00000551966 LPIN2Q92539 896 aa27.13■■□□□ 1.93
SMARCD1-212ENST00000551966 FAM198AQ9UFP1 575 aa27.13■■□□□ 1.93
SMARCD1-212ENST00000551966 PTPRCP08575 1304 aa27.12■■□□□ 1.93
SMARCD1-212ENST00000551966 FMNL1O95466 1100 aaPredicted RBP27.11■■□□□ 1.93
SMARCD1-212ENST00000551966 SLC5A1P13866 664 aa27.11■■□□□ 1.93
SMARCD1-212ENST00000551966 PRDX5P30044 214 aa27.11■■□□□ 1.93
SMARCD1-212ENST00000551966 NOL9Q5SY16 702 aaKnown RBP27.11■■□□□ 1.93
SMARCD1-212ENST00000551966 GPAT2Q6NUI2 795 aa27.11■■□□□ 1.93
SMARCD1-212ENST00000551966 SSH1Q8WYL5 1049 aa27.11■■□□□ 1.93
SMARCD1-212ENST00000551966 HOXD10P28358 340 aa27.1■■□□□ 1.93
SMARCD1-212ENST00000551966 GRK4P32298 578 aa27.1■■□□□ 1.93
SMARCD1-212ENST00000551966 USP40Q9NVE5 1235 aa27.1■■□□□ 1.93
SMARCD1-212ENST00000551966 RAET1EQ8TD07 263 aa27.09■■□□□ 1.93
SMARCD1-212ENST00000551966 BCRP11274 1271 aa27.08■■□□□ 1.93
SMARCD1-212ENST00000551966 CHRDL2Q6WN34 429 aa27.08■■□□□ 1.93
SMARCD1-212ENST00000551966 UBE2Q1Q7Z7E8 422 aa27.08■■□□□ 1.93
SMARCD1-212ENST00000551966 DPF3Q92784 378 aa27.08■■□□□ 1.93
SMARCD1-212ENST00000551966 MYPNQ86TC9 1320 aa27.08■■□□□ 1.93
SMARCD1-212ENST00000551966 PHF20L1A8MW92 1017 aa27.07■■□□□ 1.92
SMARCD1-212ENST00000551966 CXCL11O14625 94 aa27.07■■□□□ 1.92
SMARCD1-212ENST00000551966 CYP2C8P10632 490 aa27.07■■□□□ 1.92
SMARCD1-212ENST00000551966 CCL5P13501 91 aa27.07■■□□□ 1.92
SMARCD1-212ENST00000551966 ZEB1P37275 1124 aaPredicted RBP27.07■■□□□ 1.92
SMARCD1-212ENST00000551966 GJA8P48165 433 aa27.07■■□□□ 1.92
SMARCD1-212ENST00000551966 LDHBP07195 334 aaKnown RBP27.06■■□□□ 1.92
SMARCD1-212ENST00000551966 GJB1P08034 283 aa27.06■■□□□ 1.92
SMARCD1-212ENST00000551966 PRKCZQ05513 592 aa27.06■■□□□ 1.92
SMARCD1-212ENST00000551966 NKX2-3Q8TAU0 364 aa27.06■■□□□ 1.92
SMARCD1-212ENST00000551966 GABRQQ9UN88 632 aa27.06■■□□□ 1.92
SMARCD1-212ENST00000551966 AK9Q5TCS8 1911 aa27.06■■□□□ 1.92
SMARCD1-212ENST00000551966 RNF208Q9H0X6 261 aa27.05■■□□□ 1.92
SMARCD1-212ENST00000551966 RBM27Q9P2N5 1060 aaKnown RBP27.05■■□□□ 1.92
SMARCD1-212ENST00000551966 ATRNL1Q5VV63 1379 aa27.05■■□□□ 1.92
SMARCD1-212ENST00000551966 MYH13Q9UKX3 1938 aa27.04■■□□□ 1.92
SMARCD1-212ENST00000551966 ATP2B3Q16720 1220 aa27.04■■□□□ 1.92
SMARCD1-212ENST00000551966 PARK7Q99497 189 aaKnown RBP27.04■■□□□ 1.92
SMARCD1-212ENST00000551966 SIL1Q9H173 461 aa27.04■■□□□ 1.92
SMARCD1-212ENST00000551966 ZHX2Q9Y6X8 837 aa27.04■■□□□ 1.92
SMARCD1-212ENST00000551966 SALL1Q9NSC2 1324 aa27.04■■□□□ 1.92
SMARCD1-212ENST00000551966 SLURP2P0DP57 97 aa27.03■■□□□ 1.92
SMARCD1-212ENST00000551966 SH3BP5LQ7L8J4 393 aa27.03■■□□□ 1.92
SMARCD1-212ENST00000551966 BIN2Q9UBW5 565 aaPredicted RBP27.03■■□□□ 1.92
SMARCD1-212ENST00000551966 A0A0G2JLL6 359 aaPredicted RBP27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 PHKA1P46020 1223 aa27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 RGS3P49796 1198 aa27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 FCGRTP55899 365 aa27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 PRRT2Q7Z6L0 340 aaPredicted RBP27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 IDI2Q9BXS1 227 aa27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 GNL3LQ9NVN8 582 aaKnown RBP27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 CEP126Q9P2H0 1117 aa27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 AFG3L2Q9Y4W6 797 aa27.02■■□□□ 1.92
SMARCD1-212ENST00000551966 CIAO1O76071 339 aa27.01■■□□□ 1.91
SMARCD1-212ENST00000551966 PTPRAP18433 802 aa27.01■■□□□ 1.91
SMARCD1-212ENST00000551966 MAP3K10Q02779 954 aa27.01■■□□□ 1.91
SMARCD1-212ENST00000551966 SCYL3Q8IZE3 742 aa27.01■■□□□ 1.91
SMARCD1-212ENST00000551966 FBXO3Q9UK99 471 aa27.01■■□□□ 1.91
SMARCD1-212ENST00000551966 DENND2AQ9ULE3 1009 aa27.01■■□□□ 1.91
SMARCD1-212ENST00000551966 UBXN2AP68543 259 aa27■■□□□ 1.91
SMARCD1-212ENST00000551966 U2AF1L4Q8WU68 220 aaKnown RBP27■■□□□ 1.91
SMARCD1-212ENST00000551966 UNC93B1Q9H1C4 597 aa27■■□□□ 1.91
SMARCD1-212ENST00000551966 PRO3102Q9H379 93 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms