RNA–Protein interactions for RNA: ENST00000551418.5

PRPF40B-215, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-215ENST00000551418 AK9Q5TCS8 1911 aa22.37■■□□□ 1.17
PRPF40B-215ENST00000551418 NFIAQ12857 509 aa22.37■■□□□ 1.17
PRPF40B-215ENST00000551418 INTS3Q68E01 1043 aaKnown RBP22.37■■□□□ 1.17
PRPF40B-215ENST00000551418 CDC42EP5Q6NZY7 148 aa22.37■■□□□ 1.17
PRPF40B-215ENST00000551418 WDR66Q8TBY9 1149 aa22.37■■□□□ 1.17
PRPF40B-215ENST00000551418 PTCH2Q9Y6C5 1203 aa22.37■■□□□ 1.17
PRPF40B-215ENST00000551418 MAST3O60307 1309 aa22.36■■□□□ 1.17
PRPF40B-215ENST00000551418 RBBP6Q7Z6E9 1792 aaKnown RBP22.36■■□□□ 1.17
PRPF40B-215ENST00000551418 ECM2O94769 699 aaPredicted RBP22.36■■□□□ 1.17
PRPF40B-215ENST00000551418 ZFPM1Q8IX07 1006 aa22.36■■□□□ 1.17
PRPF40B-215ENST00000551418 UBTFL1P0CB47 393 aaPredicted RBP22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 CETPP11597 493 aa22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 ADORA1P30542 326 aa22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 PHKA1P46020 1223 aa22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 ATP2B3Q16720 1220 aa22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 FAM151AQ8WW52 585 aa22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 LRRFIP2Q9Y608 721 aaKnown RBP22.35■■□□□ 1.17
PRPF40B-215ENST00000551418 PPIL2Q13356 520 aa22.34■■□□□ 1.17
PRPF40B-215ENST00000551418 ZNF341Q9BYN7 854 aa22.34■■□□□ 1.17
PRPF40B-215ENST00000551418 CEP126Q9P2H0 1117 aa22.34■■□□□ 1.17
PRPF40B-215ENST00000551418 FAM198AQ9UFP1 575 aa22.34■■□□□ 1.17
PRPF40B-215ENST00000551418 TLR2O60603 784 aa22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 CIAO1O76071 339 aa22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 MYCP01106 439 aaPredicted RBP22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 SNAPC2Q13487 334 aa22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 DCAF15Q66K64 600 aa22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 ZNF333Q96JL9 665 aa22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 RPAP1Q9BWH6 1393 aaPredicted RBP22.33■■□□□ 1.17
PRPF40B-215ENST00000551418 BRCA2P51587 3418 aa22.32■■□□□ 1.16
PRPF40B-215ENST00000551418 SLURP2P0DP57 97 aa22.32■■□□□ 1.16
PRPF40B-215ENST00000551418 CTGFP29279 349 aa22.32■■□□□ 1.16
PRPF40B-215ENST00000551418 MEIS3Q99687 375 aa22.32■■□□□ 1.16
PRPF40B-215ENST00000551418 USP40Q9NVE5 1235 aa22.32■■□□□ 1.16
PRPF40B-215ENST00000551418 ZNF112Q9UJU3 913 aa22.32■■□□□ 1.16
PRPF40B-215ENST00000551418 LDHBP07195 334 aaKnown RBP22.31■■□□□ 1.16
PRPF40B-215ENST00000551418 MYH2Q9UKX2 1941 aa22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 LACTBP83111 547 aaPredicted RBP22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 PPATQ06203 517 aa22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 MOGSQ13724 837 aa22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 SH3TC2Q8TF17 1288 aa22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 HOOK2Q96ED9 719 aa22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 CPA4Q9UI42 421 aa22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP22.3■■□□□ 1.16
PRPF40B-215ENST00000551418 TIMM10P62072 90 aa22.29■■□□□ 1.16
PRPF40B-215ENST00000551418 SLC9C1Q4G0N8 1177 aa22.29■■□□□ 1.16
PRPF40B-215ENST00000551418 C17orf99Q6UX52 265 aa22.29■■□□□ 1.16
PRPF40B-215ENST00000551418 FBXO3Q9UK99 471 aa22.29■■□□□ 1.16
PRPF40B-215ENST00000551418 IL15P40933 162 aaPredicted RBP22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 CCDC102BQ68D86 513 aa22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 ZCCHC17Q9NP64 241 aaKnown RBP22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 COPRSQ9NQ92 184 aa22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 GNL3LQ9NVN8 582 aaKnown RBP22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 DENND2AQ9ULE3 1009 aa22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 SALL1Q9NSC2 1324 aa22.28■■□□□ 1.16
PRPF40B-215ENST00000551418 SH3BP5LQ7L8J4 393 aa22.27■■□□□ 1.16
PRPF40B-215ENST00000551418 TMEM106CQ9BVX2 250 aa22.27■■□□□ 1.16
PRPF40B-215ENST00000551418 API5Q9BZZ5 524 aaKnown RBP22.27■■□□□ 1.16
PRPF40B-215ENST00000551418 KCNH4Q9UQ05 1017 aa22.27■■□□□ 1.16
PRPF40B-215ENST00000551418 PDHXO00330 501 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 RGS3P49796 1198 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 RARSP54136 660 aaKnown RBP22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 RASGRF1Q13972 1273 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 ARHGEF6Q15052 776 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 ANKRD23Q86SG2 305 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 TNNQ9UQP3 1299 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 ADGRA2Q96PE1 1338 aa22.26■■□□□ 1.15
PRPF40B-215ENST00000551418 ATRNL1Q5VV63 1379 aa22.25■■□□□ 1.15
PRPF40B-215ENST00000551418 PHF20L1A8MW92 1017 aa22.25■■□□□ 1.15
PRPF40B-215ENST00000551418 NOL9Q5SY16 702 aaKnown RBP22.25■■□□□ 1.15
PRPF40B-215ENST00000551418 GPAT2Q6NUI2 795 aa22.25■■□□□ 1.15
PRPF40B-215ENST00000551418 TRIM47Q96LD4 638 aa22.25■■□□□ 1.15
PRPF40B-215ENST00000551418 SEMA3EO15041 775 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 WDHD1O75717 1129 aaPredicted RBP22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 TFCP2Q12800 502 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 KIF22Q14807 665 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 SLC4A8Q2Y0W8 1093 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 NBPF11Q86T75 865 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 DDX4Q9NQI0 724 aaKnown RBP22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 ABCF2Q9UG63 623 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 GAKO14976 1311 aa22.24■■□□□ 1.15
PRPF40B-215ENST00000551418 DOCK2Q92608 1830 aa22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 DDTLA6NHG4 134 aaPredicted RBP22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 CT47B1P0C2W7 299 aaPredicted RBP22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 PSMC4P43686 418 aa22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 ZNF384Q8TF68 577 aa22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 PCDH10Q9P2E7 1040 aa22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 FRMD4AQ9P2Q2 1039 aaPredicted RBP22.23■■□□□ 1.15
PRPF40B-215ENST00000551418 CYP2C8P10632 490 aa22.22■■□□□ 1.15
PRPF40B-215ENST00000551418 MTFR1Q15390 333 aa22.22■■□□□ 1.15
PRPF40B-215ENST00000551418 HABP4Q5JVS0 413 aaKnown RBP22.22■■□□□ 1.15
PRPF40B-215ENST00000551418 XAGE2Q96GT9 111 aa22.22■■□□□ 1.15
PRPF40B-215ENST00000551418 IDI2Q9BXS1 227 aa22.22■■□□□ 1.15
PRPF40B-215ENST00000551418 RFX7Q2KHR2 1363 aa22.22■■□□□ 1.15
PRPF40B-215ENST00000551418 A0A1B0GUL7 405 aa22.21■■□□□ 1.15
PRPF40B-215ENST00000551418 SRGAP3O43295 1099 aa22.21■■□□□ 1.15
PRPF40B-215ENST00000551418 OSBPP22059 807 aa22.21■■□□□ 1.15
PRPF40B-215ENST00000551418 ZHX2Q9Y6X8 837 aa22.21■■□□□ 1.15
PRPF40B-215ENST00000551418 ENTPD3O75355 529 aa22.2■■□□□ 1.14
PRPF40B-215ENST00000551418 PI16Q6UXB8 463 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms