RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TTC6Q86TZ1 520 aa13.54□□□□□ -0.24
RAB5C-208ENST00000551338 TXNRD3Q86VQ6 643 aa13.54□□□□□ -0.24
RAB5C-208ENST00000551338 VPS37DQ86XT2 251 aa13.54□□□□□ -0.24
RAB5C-208ENST00000551338 PROM2Q8N271 834 aa13.54□□□□□ -0.24
RAB5C-208ENST00000551338 FAM184AQ8NB25 1140 aa13.54□□□□□ -0.24
RAB5C-208ENST00000551338 RIOK1Q9BRS2 568 aaKnown RBP13.54□□□□□ -0.24
RAB5C-208ENST00000551338 NAP1L2Q9ULW6 460 aaPredicted RBP13.54□□□□□ -0.24
RAB5C-208ENST00000551338 MAGEB6P1A0A0J9YX57 407 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 HIBADHP31937 336 aaKnown RBP13.53□□□□□ -0.24
RAB5C-208ENST00000551338 RBM6P78332 1123 aaKnown RBP13.53□□□□□ -0.24
RAB5C-208ENST00000551338 KRT85P78386 507 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 CSPP1Q1MSJ5 1256 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 CRY2Q49AN0 593 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 NAA16Q6N069 864 aaPredicted RBP13.53□□□□□ -0.24
RAB5C-208ENST00000551338 STAG1Q8WVM7 1258 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 CHMP4CQ96CF2 233 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 TMEM87BQ96K49 555 aa13.53□□□□□ -0.24
RAB5C-208ENST00000551338 SYCE3A1L190 88 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 FDPSP14324 419 aaKnown RBP13.52□□□□□ -0.25
RAB5C-208ENST00000551338 TDO2P48775 406 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 FOSBP53539 338 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 DYNLL1P63167 89 aaKnown RBP13.52□□□□□ -0.25
RAB5C-208ENST00000551338 ST5P78524 1137 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 AKNAD1Q5T1N1 836 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 LRSAM1Q6UWE0 723 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 RAB11FIP4Q86YS3 637 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 SYAP1Q96A49 352 aaPredicted RBP13.52□□□□□ -0.25
RAB5C-208ENST00000551338 NACAP1Q9BZK3 213 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 SENP2Q9HC62 589 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 INCENPQ9NQS7 918 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 ANGEL1Q9UNK9 670 aaKnown RBP13.52□□□□□ -0.25
RAB5C-208ENST00000551338 LEMD3Q9Y2U8 911 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 KIF3AQ9Y496 699 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 ELP1O95163 1332 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 XDHP47989 1333 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 MYH1P12882 1939 aa13.52□□□□□ -0.25
RAB5C-208ENST00000551338 NID2Q14112 1375 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 H3BQV1 296 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 POLRMTO00411 1230 aaKnown RBP13.51□□□□□ -0.25
RAB5C-208ENST00000551338 CHAF1AQ13111 956 aaPredicted RBP13.51□□□□□ -0.25
RAB5C-208ENST00000551338 ZNF827Q17R98 1081 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 IFFO2Q5TF58 517 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 C15orf52Q6ZUT6 534 aaKnown RBP13.51□□□□□ -0.25
RAB5C-208ENST00000551338 IGDCC4Q8TDY8 1250 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 SDR42E1Q8WUS8 393 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 RPGRQ92834 1020 aaKnown RBP13.51□□□□□ -0.25
RAB5C-208ENST00000551338 NSUN4Q96CB9 384 aaKnown RBP13.51□□□□□ -0.25
RAB5C-208ENST00000551338 ZSCAN16Q9H4T2 348 aaPredicted RBP13.51□□□□□ -0.25
RAB5C-208ENST00000551338 LY9Q9HBG7 655 aa13.51□□□□□ -0.25
RAB5C-208ENST00000551338 ZNF646O15015 1829 aaPredicted RBP13.5□□□□□ -0.25
RAB5C-208ENST00000551338 KDM4AO75164 1064 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 MECOMQ03112 1051 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 PPARAQ07869 468 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 ZNF772Q68DY9 489 aaPredicted RBP13.5□□□□□ -0.25
RAB5C-208ENST00000551338 APOA5Q6Q788 366 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 SGMS1Q86VZ5 419 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 KRT23Q9C075 422 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 RBSNQ9H1K0 784 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 CNNM2Q9H8M5 875 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 ANAPC4Q9UJX5 808 aa13.5□□□□□ -0.25
RAB5C-208ENST00000551338 PPFIA3O75145 1194 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 PRDX5P30044 214 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 GPSM2P81274 684 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 TMEM67Q5HYA8 995 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 CCDC183Q5T5S1 534 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 MFSD6Q6ZSS7 791 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 TDRD7Q8NHU6 1098 aaKnown RBP13.49□□□□□ -0.25
RAB5C-208ENST00000551338 AKT1S1Q96B36 256 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 BRIP1Q9BX63 1249 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 ZSWIM5Q9P217 1185 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 MYH8P13535 1937 aa13.49□□□□□ -0.25
RAB5C-208ENST00000551338 SMIM22K7EJ46 135 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 PLSCR1O15162 318 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 DHX16O60231 1041 aaKnown RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 HOXA10P31260 410 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 ADD1P35611 737 aaKnown RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 LIFRP42702 1097 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 METAP2P50579 478 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 LEO1Q8WVC0 666 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 RBM17Q96I25 401 aaKnown RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 GPR101Q96P66 508 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 MTA3Q9BTC8 594 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 ANKIB1Q9P2G1 1089 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 TFIP11Q9UBB9 837 aaKnown RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 ORC3Q9UBD5 711 aaPredicted RBP13.48□□□□□ -0.25
RAB5C-208ENST00000551338 ADAMTSL1Q8N6G6 1762 aa13.48□□□□□ -0.25
RAB5C-208ENST00000551338 KLRG2A4D1S0 409 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-208ENST00000551338 GOLGA8AA7E2F4 631 aa13.47□□□□□ -0.25
RAB5C-208ENST00000551338 IFIT3O14879 490 aaKnown RBP13.47□□□□□ -0.25
RAB5C-208ENST00000551338 RXRAP19793 462 aa13.47□□□□□ -0.25
RAB5C-208ENST00000551338 ATP2B4P23634 1241 aa13.47□□□□□ -0.25
RAB5C-208ENST00000551338 CDC27P30260 824 aa13.47□□□□□ -0.25
RAB5C-208ENST00000551338 NASPP49321 788 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-208ENST00000551338 TPRNQ4KMQ1 711 aa13.47□□□□□ -0.25
RAB5C-208ENST00000551338 RRP12Q5JTH9 1297 aaKnown RBP13.47□□□□□ -0.25
RAB5C-208ENST00000551338 GIMAP6Q6P9H5 292 aa13.47□□□□□ -0.25
RAB5C-208ENST00000551338 TMED8Q6PL24 325 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-208ENST00000551338 ILDR1Q86SU0 546 aaPredicted RBP13.47□□□□□ -0.25
RAB5C-208ENST00000551338 SPATA32Q96LK8 384 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms