RNA–Protein interactions for RNA: ENST00000551176.1

ERBB3-218, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 277 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-218ENST00000551176 UQCRFS1P1P0C7P4 283 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 NF2P35240 595 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 LBX1P52954 281 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 RRP1P56182 461 aaKnown RBP9.37□□□□□ -0.91
ERBB3-218ENST00000551176 MKRN3Q13064 507 aaKnown RBP9.37□□□□□ -0.91
ERBB3-218ENST00000551176 TNFAIP1Q13829 316 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 SUPT20HL1Q3ZLR7 823 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 FKBP1CQ5VVH2 108 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 ARMC9Q7Z3E5 817 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 RHPN1Q8TCX5 695 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 AIDAQ96BJ3 306 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 FAM163AQ96GL9 167 aaPredicted RBP9.37□□□□□ -0.91
ERBB3-218ENST00000551176 ZNF512BQ96KM6 892 aaPredicted RBP9.37□□□□□ -0.91
ERBB3-218ENST00000551176 CSRNP1Q96S65 589 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 PIH1D3Q9NQM4 214 aaKnown RBP9.37□□□□□ -0.91
ERBB3-218ENST00000551176 USP40Q9NVE5 1235 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 FAM198AQ9UFP1 575 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 NDUFB9Q9Y6M9 179 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 POLR2AP24928 1970 aaKnown RBP9.37□□□□□ -0.91
ERBB3-218ENST00000551176 RFX7Q2KHR2 1363 aa9.37□□□□□ -0.91
ERBB3-218ENST00000551176 GJA5P36382 358 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 ZAP70P43403 619 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 CTCFP49711 727 aaPredicted RBP9.36□□□□□ -0.91
ERBB3-218ENST00000551176 TCP10Q12799 353 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 TTC39AQ5SRH9 613 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 FAM83AQ86UY5 434 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 AACSQ86V21 672 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 DZIP1Q86YF9 867 aaKnown RBP9.36□□□□□ -0.91
ERBB3-218ENST00000551176 ERC1Q8IUD2 1116 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 ZGPATQ8N5A5 531 aaKnown RBP9.36□□□□□ -0.91
ERBB3-218ENST00000551176 NSUN4Q96CB9 384 aaKnown RBP9.36□□□□□ -0.91
ERBB3-218ENST00000551176 PCDHB15Q9Y5E8 787 aa9.36□□□□□ -0.91
ERBB3-218ENST00000551176 MROH7-TTC4A0A0A0MT08 1334 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 GPR75-ASB3A0A0A6YYF3 556 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 PPP1R12BO60237 982 aaPredicted RBP9.35□□□□□ -0.91
ERBB3-218ENST00000551176 HMMRO75330 724 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 WDHD1O75717 1129 aaPredicted RBP9.35□□□□□ -0.91
ERBB3-218ENST00000551176 BTDP43251 543 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 TNNI2P48788 182 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 RHBDL3P58872 404 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 HSP90AB4PQ58FF6 505 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 CCDC158Q5M9N0 1113 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 SPRYD7Q5W111 196 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 SPTY2D1Q68D10 685 aaPredicted RBP9.35□□□□□ -0.91
ERBB3-218ENST00000551176 PPP1R3FQ6ZSY5 799 aaPredicted RBP9.35□□□□□ -0.91
ERBB3-218ENST00000551176 ERICH6Q7L0X2 663 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 SH3BP5LQ7L8J4 393 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 ADGRA1Q86SQ6 560 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 FAM151AQ8WW52 585 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 DDX4Q9NQI0 724 aaKnown RBP9.35□□□□□ -0.91
ERBB3-218ENST00000551176 TMOD2Q9NZR1 351 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 RAI14Q9P0K7 980 aa9.35□□□□□ -0.91
ERBB3-218ENST00000551176 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.35□□□□□ -0.91
ERBB3-218ENST00000551176 SLURP2P0DP57 97 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 RGS3P49796 1198 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 VGLL4Q14135 290 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 MIGA2Q7L4E1 593 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.34□□□□□ -0.91
ERBB3-218ENST00000551176 KIF1BPQ96EK5 621 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 SLC10A4Q96EP9 437 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 CRBNQ96SW2 442 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 IDI2Q9BXS1 227 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 CHMP4BQ9H444 224 aaKnown RBP9.34□□□□□ -0.91
ERBB3-218ENST00000551176 ANTXR1Q9H6X2 564 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 PRDM10Q9NQV6 1147 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 RNF186Q9NXI6 227 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 LRP2BPQ9P2M1 347 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 ATRNL1Q5VV63 1379 aa9.34□□□□□ -0.91
ERBB3-218ENST00000551176 RPAP1Q9BWH6 1393 aaPredicted RBP9.34□□□□□ -0.91
ERBB3-218ENST00000551176 ECM29Q5VYK3 1845 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 SMARCA5O60264 1052 aaPredicted RBP9.33□□□□□ -0.92
ERBB3-218ENST00000551176 RAB11FIP3O75154 756 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 TRPA1O75762 1119 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 IREB2P48200 963 aaKnown RBP9.33□□□□□ -0.92
ERBB3-218ENST00000551176 ANKRD13AQ8IZ07 590 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 CLASRPQ8N2M8 674 aaKnown RBP9.33□□□□□ -0.92
ERBB3-218ENST00000551176 SH3RF3Q8TEJ3 882 aaPredicted RBP9.33□□□□□ -0.92
ERBB3-218ENST00000551176 ZKSCAN4Q969J2 545 aaPredicted RBP9.33□□□□□ -0.92
ERBB3-218ENST00000551176 WNK4Q96J92 1243 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 BEGAINQ9BUH8 593 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 BCL11AQ9H165 835 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 ELP3Q9H9T3 547 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 SNCAIPQ9Y6H5 919 aa9.33□□□□□ -0.92
ERBB3-218ENST00000551176 DDTLA6NHG4 134 aaPredicted RBP9.32□□□□□ -0.92
ERBB3-218ENST00000551176 UNCXA6NJT0 531 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 CA12O43570 354 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 ENTPD3O75355 529 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 TM4SF4P48230 202 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 GSTO1P78417 241 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 MAP3K9P80192 1104 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 PICALMQ13492 652 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 SLF2Q8IX21 1173 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 OPTNQ96CV9 577 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 EDC3Q96F86 508 aaKnown RBP9.32□□□□□ -0.92
ERBB3-218ENST00000551176 WRNIP1Q96S55 665 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 DCTPP1Q9H773 170 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 SAGE1Q9NXZ1 904 aa9.32□□□□□ -0.92
ERBB3-218ENST00000551176 PHF20L1A8MW92 1017 aa9.31□□□□□ -0.92
ERBB3-218ENST00000551176 IDH1O75874 414 aaKnown RBP9.31□□□□□ -0.92
ERBB3-218ENST00000551176 LDHCP07864 332 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms