RNA–Protein interactions for RNA: ENST00000551063.5

PRPF40B-211, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 4

Gene PRPF40B, Length 531 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-211ENST00000551063 APBB1O00213 710 aa18.86■□□□□ 0.61
PRPF40B-211ENST00000551063 ARMC9Q7Z3E5 817 aa18.86■□□□□ 0.61
PRPF40B-211ENST00000551063 CCDC102AQ96A19 550 aa18.86■□□□□ 0.61
PRPF40B-211ENST00000551063 LRRCC1Q9C099 1032 aa18.86■□□□□ 0.61
PRPF40B-211ENST00000551063 DCTPP1Q9H773 170 aa18.86■□□□□ 0.61
PRPF40B-211ENST00000551063 PCDHB15Q9Y5E8 787 aa18.86■□□□□ 0.61
PRPF40B-211ENST00000551063 SSC5DA1L4H1 1573 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 MROH7-TTC4A0A0A0MT08 1334 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 IFIT2P09913 472 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 GSTO1P78417 241 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 MECOMQ03112 1051 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 TTLL12Q14166 644 aaPredicted RBP18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 MAP3K11Q16584 847 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 CDC42EP5Q6NZY7 148 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 TBC1D9Q6ZT07 1266 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 NSUN4Q96CB9 384 aaKnown RBP18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 SNRKQ9NRH2 765 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 RAI14Q9P0K7 980 aa18.85■□□□□ 0.61
PRPF40B-211ENST00000551063 PPP1R12BO60237 982 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 LDHCP07864 332 aa18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 ZAP70P43403 619 aa18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 CACNB3P54284 484 aa18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 NBPF12Q5TAG4 269 aaPredicted RBP18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 TEPSINQ96N21 525 aa18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 LRP2BPQ9P2M1 347 aa18.84■□□□□ 0.61
PRPF40B-211ENST00000551063 CYP2E1P05181 493 aaPredicted RBP18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 SLC10A3P09131 477 aa18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 ZNF157P51786 506 aaPredicted RBP18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 MOB2Q70IA6 237 aa18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 ZNF384Q8TF68 577 aa18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 ABHD8Q96I13 439 aa18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 TMEM39BQ9GZU3 492 aa18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 TSKSQ9UJT2 592 aa18.83■□□□□ 0.6
PRPF40B-211ENST00000551063 RFX7Q2KHR2 1363 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 GPR75-ASB3A0A0A6YYF3 556 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 UNCXA6NJT0 531 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 FAM155AB1AL88 458 aaPredicted RBP18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 UBE2Q2LH0YL09 131 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 BTDP43251 543 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 LDLRAD1Q5T700 205 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 USP40Q9NVE5 1235 aa18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 ANGEL1Q9UNK9 670 aaKnown RBP18.82■□□□□ 0.6
PRPF40B-211ENST00000551063 MAP4K4O95819 1239 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-211ENST00000551063 TMED8Q6PL24 325 aaPredicted RBP18.81■□□□□ 0.6
PRPF40B-211ENST00000551063 RASAL3Q86YV0 1011 aa18.81■□□□□ 0.6
PRPF40B-211ENST00000551063 FAM151AQ8WW52 585 aa18.81■□□□□ 0.6
PRPF40B-211ENST00000551063 HOOK2Q96ED9 719 aa18.81■□□□□ 0.6
PRPF40B-211ENST00000551063 IDI2Q9BXS1 227 aa18.81■□□□□ 0.6
PRPF40B-211ENST00000551063 IREB2P48200 963 aaKnown RBP18.8■□□□□ 0.6
PRPF40B-211ENST00000551063 NFIAQ12857 509 aa18.8■□□□□ 0.6
PRPF40B-211ENST00000551063 PRKG1Q13976 671 aa18.8■□□□□ 0.6
PRPF40B-211ENST00000551063 CDAN1Q8IWY9 1227 aa18.8■□□□□ 0.6
PRPF40B-211ENST00000551063 ZIC5Q96T25 663 aa18.8■□□□□ 0.6
PRPF40B-211ENST00000551063 PIH1D3Q9NQM4 214 aaKnown RBP18.8■□□□□ 0.6
PRPF40B-211ENST00000551063 AKAP11Q9UKA4 1901 aa18.79■□□□□ 0.6
PRPF40B-211ENST00000551063 ENTPD3O75355 529 aa18.79■□□□□ 0.6
PRPF40B-211ENST00000551063 KIF23Q02241 960 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-211ENST00000551063 NAA16Q6N069 864 aaPredicted RBP18.79■□□□□ 0.6
PRPF40B-211ENST00000551063 SUPT16HQ9Y5B9 1047 aaKnown RBP18.79■□□□□ 0.6
PRPF40B-211ENST00000551063 MAST2Q6P0Q8 1798 aa18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 USP2O75604 605 aaPredicted RBP18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 NPM3O75607 178 aaKnown RBP18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 WDHD1O75717 1129 aaPredicted RBP18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 RHBDL3P58872 404 aa18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 HDAC1Q13547 482 aaPredicted RBP18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 TTF1Q15361 905 aaPredicted RBP18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 REM2Q8IYK8 340 aaPredicted RBP18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 SAGE1Q9NXZ1 904 aa18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 FAM198AQ9UFP1 575 aa18.78■□□□□ 0.6
PRPF40B-211ENST00000551063 SMARCA5O60264 1052 aaPredicted RBP18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 IDH1O75874 414 aaKnown RBP18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 BAG3O95817 575 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 ATP5JP18859 108 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 RGS3P49796 1198 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 MAP3K12Q12852 859 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 DCAF15Q66K64 600 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 ANKRD13AQ8IZ07 590 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 NOL10Q9BSC4 688 aaKnown RBP18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 FZD1Q9UP38 647 aa18.77■□□□□ 0.6
PRPF40B-211ENST00000551063 PPP4CP60510 307 aa18.76■□□□□ 0.59
PRPF40B-211ENST00000551063 TCP10Q12799 353 aa18.76■□□□□ 0.59
PRPF40B-211ENST00000551063 BCL11AQ9H165 835 aa18.76■□□□□ 0.59
PRPF40B-211ENST00000551063 ANTXR1Q9H6X2 564 aa18.76■□□□□ 0.59
PRPF40B-211ENST00000551063 NDUFB9Q9Y6M9 179 aa18.76■□□□□ 0.59
PRPF40B-211ENST00000551063 MYH2Q9UKX2 1941 aa18.76■□□□□ 0.59
PRPF40B-211ENST00000551063 PLCG2P16885 1265 aa18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 CERS3Q8IU89 383 aa18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 GCC1Q96CN9 775 aa18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 GPATCH3Q96I76 525 aa18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 DNAJC2Q99543 621 aaKnown RBP18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 ECHDC1Q9NTX5 307 aa18.75■□□□□ 0.59
PRPF40B-211ENST00000551063 COL2A1P02458 1487 aaPredicted RBP18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 MAP3K9P80192 1104 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 ADGRA1Q86SQ6 560 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 EXOC6Q8TAG9 804 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 CSRNP1Q96S65 589 aa18.74■□□□□ 0.59
PRPF40B-211ENST00000551063 HAUS7Q99871 368 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 495.1 ms