RNA–Protein interactions for RNA: ENST00000550589.1

CCDC59-204, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 2,101 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-204ENST00000550589 IGKV5-2P06315 115 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 FBXO45P0C2W1 286 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 ATP5JP18859 108 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 IL15P40933 162 aaPredicted RBP5.18□□□□□ -1.58
CCDC59-204ENST00000550589 PTK2Q05397 1052 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 TMEM132AQ24JP5 1023 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 PROSER3Q2NL68 480 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 RABL6Q3YEC7 729 aaPredicted RBP5.18□□□□□ -1.58
CCDC59-204ENST00000550589 HS1BP3Q53T59 392 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 CAVIN1Q6NZI2 390 aaKnown RBP5.18□□□□□ -1.58
CCDC59-204ENST00000550589 BLOC1S2Q6QNY1 142 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 MAP4K1Q92918 833 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 CARD10Q9BWT7 1032 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 UPF3BQ9BZI7 483 aaKnown RBP5.18□□□□□ -1.58
CCDC59-204ENST00000550589 CWC25Q9NXE8 425 aaPredicted RBP5.18□□□□□ -1.58
CCDC59-204ENST00000550589 NXF1Q9UBU9 619 aaKnown RBP5.18□□□□□ -1.58
CCDC59-204ENST00000550589 AKAP2Q9Y2D5 859 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 WASF2Q9Y6W5 498 aa5.18□□□□□ -1.58
CCDC59-204ENST00000550589 CYP27B1O15528 508 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 STX6O43752 255 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TIMP2P16035 220 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 MSNP26038 577 aaKnown RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 ZSCAN23Q3MJ62 389 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 HSP90AB3PQ58FF7 597 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 PRPF40BQ6NWY9 871 aaKnown RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 EAF2Q96CJ1 260 aaPredicted RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TRIM47Q96LD4 638 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 JAKMIP1Q96N16 626 aaKnown RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 KRTAP4-2Q9BYR5 136 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 CCDC8Q9H0W5 538 aaPredicted RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 SIL1Q9H173 461 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 ALDH8A1Q9H2A2 487 aaPredicted RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 BOLA2Q9H3K6 86 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 SLAIN2Q9P270 581 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TBC1D2BQ9UPU7 963 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 PA2G4Q9UQ80 394 aaKnown RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 USP16Q9Y5T5 823 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 PXDNQ92626 1479 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 N4BP2Q86UW6 1770 aaPredicted RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 SASH1O94885 1247 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 ZSCAN22P10073 491 aaPredicted RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 HSP90B1P14625 803 aaKnown RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 AK2P54819 239 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 FGD1P98174 961 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 IRF5Q13568 498 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 MCM6Q14566 821 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 NECTIN1Q15223 517 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 CHRNA2Q15822 529 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 CCDC57Q2TAC2 916 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TSGA10IPQ3SY00 556 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TNNI3KQ59H18 835 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 LRSAM1Q6UWE0 723 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 BRINP3Q76B58 766 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 NOL8Q76FK4 1167 aaKnown RBP5.17□□□□□ -1.58
CCDC59-204ENST00000550589 UBE3BQ7Z3V4 1068 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TRIM46Q7Z4K8 759 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 KCNB2Q92953 911 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 TTC14Q96N46 770 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 PALD1Q9ULE6 856 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 CHMP3Q9Y3E7 222 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 FPGT-TNNI3KV9GXZ4 949 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 CAMTA1Q9Y6Y1 1673 aa5.17□□□□□ -1.58
CCDC59-204ENST00000550589 SOS2Q07890 1332 aaPredicted RBP5.16□□□□□ -1.58
CCDC59-204ENST00000550589 PRAMEF22A3QJZ6 481 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 UBE2HP62256 183 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 PTPN12Q05209 780 aaKnown RBP5.16□□□□□ -1.58
CCDC59-204ENST00000550589 NR5A1Q13285 461 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 MCMDC2Q4G0Z9 681 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 CCDC158Q5M9N0 1113 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 CREB3L3Q68CJ9 461 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 KIF6Q6ZMV9 814 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 VASH1Q7L8A9 365 aaPredicted RBP5.16□□□□□ -1.58
CCDC59-204ENST00000550589 ZBTB33Q86T24 672 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 ITPKCQ96DU7 683 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 ZFAND3Q9H8U3 227 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 ATP13A2Q9NQ11 1180 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 TMOD3Q9NYL9 352 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 RBM8AQ9Y5S9 174 aaKnown RBP5.16□□□□□ -1.58
CCDC59-204ENST00000550589 KDM6AO15550 1401 aaPredicted RBP5.16□□□□□ -1.58
CCDC59-204ENST00000550589 TRPM3Q9HCF6 1732 aaPredicted RBP5.16□□□□□ -1.58
CCDC59-204ENST00000550589 MRC1P22897 1456 aa5.16□□□□□ -1.58
CCDC59-204ENST00000550589 GOLGA6L4A6NEF3 574 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 ZBBXA8MT70 800 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 H7C1W4 665 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 CIAO1O76071 339 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 ZFYP08048 801 aaPredicted RBP5.15□□□□□ -1.58
CCDC59-204ENST00000550589 FSHRP23945 695 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 KRT85P78386 507 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 NMIQ13287 307 aaPredicted RBP5.15□□□□□ -1.58
CCDC59-204ENST00000550589 TAF7LQ5H9L4 462 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 GORABQ5T7V8 394 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 LMBR1LQ6UX01 489 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 TMEM87AQ8NBN3 555 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 DDX54Q8TDD1 881 aaKnown RBP5.15□□□□□ -1.58
CCDC59-204ENST00000550589 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.15□□□□□ -1.58
CCDC59-204ENST00000550589 KAZALD1Q96I82 304 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 HAUS7Q99871 368 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 HELLSQ9NRZ9 838 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 CEP126Q9P2H0 1117 aa5.15□□□□□ -1.58
CCDC59-204ENST00000550589 NDUFB9Q9Y6M9 179 aa5.15□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms