RNA–Protein interactions for RNA: ENST00000550444.1

HCFC2-205, Transcript of host cell factor C2, humanhuman

TSL 4

Gene HCFC2, Length 746 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-205ENST00000550444 CENPFP49454 3210 aa21.5■■□□□ 1.03
HCFC2-205ENST00000550444 SLC5A1P13866 664 aa21.49■■□□□ 1.03
HCFC2-205ENST00000550444 FGFR2P21802 821 aa21.49■■□□□ 1.03
HCFC2-205ENST00000550444 PPATQ06203 517 aa21.49■■□□□ 1.03
HCFC2-205ENST00000550444 ARAP2Q8WZ64 1704 aa21.49■■□□□ 1.03
HCFC2-205ENST00000550444 WDR66Q8TBY9 1149 aa21.48■■□□□ 1.03
HCFC2-205ENST00000550444 FAM151AQ8WW52 585 aa21.48■■□□□ 1.03
HCFC2-205ENST00000550444 USP44Q9H0E7 712 aa21.48■■□□□ 1.03
HCFC2-205ENST00000550444 COLQQ9Y215 455 aaPredicted RBP21.48■■□□□ 1.03
HCFC2-205ENST00000550444 EYA2O00167 538 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 PDHXO00330 501 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 GNRH1P01148 92 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 PSMC4P43686 418 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 C17orf99Q6UX52 265 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 LPIN2Q92539 896 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 PTPRCP08575 1304 aa21.47■■□□□ 1.03
HCFC2-205ENST00000550444 RBBP6Q7Z6E9 1792 aaKnown RBP21.46■■□□□ 1.03
HCFC2-205ENST00000550444 FMNL1O95466 1100 aaPredicted RBP21.46■■□□□ 1.03
HCFC2-205ENST00000550444 FXR1P51114 621 aaKnown RBP eCLIP21.46■■□□□ 1.03
HCFC2-205ENST00000550444 PRMT2P55345 433 aa21.46■■□□□ 1.03
HCFC2-205ENST00000550444 DIXDC1Q155Q3 683 aa21.46■■□□□ 1.03
HCFC2-205ENST00000550444 CDC42EP5Q6NZY7 148 aa21.46■■□□□ 1.03
HCFC2-205ENST00000550444 KIF16BQ96L93 1317 aa21.46■■□□□ 1.03
HCFC2-205ENST00000550444 H0YGN5 161 aa21.45■■□□□ 1.02
HCFC2-205ENST00000550444 CTGFP29279 349 aa21.45■■□□□ 1.02
HCFC2-205ENST00000550444 MTFR1Q15390 333 aa21.45■■□□□ 1.02
HCFC2-205ENST00000550444 ANKRD23Q86SG2 305 aa21.45■■□□□ 1.02
HCFC2-205ENST00000550444 DAGLAQ9Y4D2 1042 aa21.45■■□□□ 1.02
HCFC2-205ENST00000550444 BRCA2P51587 3418 aa21.45■■□□□ 1.02
HCFC2-205ENST00000550444 HOXD10P28358 340 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 RFX5P48382 616 aaPredicted RBP21.44■■□□□ 1.02
HCFC2-205ENST00000550444 NFIAQ12857 509 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 RAET1EQ8TD07 263 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 SSH1Q8WYL5 1049 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 TRIM47Q96LD4 638 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 USP40Q9NVE5 1235 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 SRRDQ9UH36 339 aa21.44■■□□□ 1.02
HCFC2-205ENST00000550444 RPAP1Q9BWH6 1393 aaPredicted RBP21.44■■□□□ 1.02
HCFC2-205ENST00000550444 OSBPP22059 807 aa21.43■■□□□ 1.02
HCFC2-205ENST00000550444 PRDX5P30044 214 aa21.43■■□□□ 1.02
HCFC2-205ENST00000550444 SIL1Q9H173 461 aa21.43■■□□□ 1.02
HCFC2-205ENST00000550444 ZNF112Q9UJU3 913 aa21.43■■□□□ 1.02
HCFC2-205ENST00000550444 ZSWIM8A7E2V4 1837 aa21.42■■□□□ 1.02
HCFC2-205ENST00000550444 LDHBP07195 334 aaKnown RBP21.42■■□□□ 1.02
HCFC2-205ENST00000550444 DPF3Q92784 378 aa21.42■■□□□ 1.02
HCFC2-205ENST00000550444 GNL3LQ9NVN8 582 aaKnown RBP21.42■■□□□ 1.02
HCFC2-205ENST00000550444 BIN2Q9UBW5 565 aaPredicted RBP21.42■■□□□ 1.02
HCFC2-205ENST00000550444 KCNH4Q9UQ05 1017 aa21.42■■□□□ 1.02
HCFC2-205ENST00000550444 ZNF521Q96K83 1311 aa21.41■■□□□ 1.02
HCFC2-205ENST00000550444 GRK4P32298 578 aa21.41■■□□□ 1.02
HCFC2-205ENST00000550444 ATG9AQ7Z3C6 839 aa21.41■■□□□ 1.02
HCFC2-205ENST00000550444 ZFPM1Q8IX07 1006 aa21.41■■□□□ 1.02
HCFC2-205ENST00000550444 CEP126Q9P2H0 1117 aa21.41■■□□□ 1.02
HCFC2-205ENST00000550444 FAM198AQ9UFP1 575 aa21.41■■□□□ 1.02
HCFC2-205ENST00000550444 MYPNQ86TC9 1320 aa21.4■■□□□ 1.02
HCFC2-205ENST00000550444 MOGSQ13724 837 aa21.4■■□□□ 1.02
HCFC2-205ENST00000550444 ATP2B3Q16720 1220 aa21.4■■□□□ 1.02
HCFC2-205ENST00000550444 ZNF316A6NFI3 1004 aaPredicted RBP21.39■■□□□ 1.01
HCFC2-205ENST00000550444 CYP2C8P10632 490 aa21.39■■□□□ 1.01
HCFC2-205ENST00000550444 NOL9Q5SY16 702 aaKnown RBP21.39■■□□□ 1.01
HCFC2-205ENST00000550444 SHISA4Q96DD7 197 aa21.39■■□□□ 1.01
HCFC2-205ENST00000550444 PARK7Q99497 189 aaKnown RBP21.39■■□□□ 1.01
HCFC2-205ENST00000550444 E9PSI1 815 aa21.38■■□□□ 1.01
HCFC2-205ENST00000550444 CCL5P13501 91 aa21.38■■□□□ 1.01
HCFC2-205ENST00000550444 CHRDL2Q6WN34 429 aa21.38■■□□□ 1.01
HCFC2-205ENST00000550444 ZSCAN29Q8IWY8 852 aaPredicted RBP21.38■■□□□ 1.01
HCFC2-205ENST00000550444 PICK1Q9NRD5 415 aa21.38■■□□□ 1.01
HCFC2-205ENST00000550444 ADGRA2Q96PE1 1338 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 CXCL11O14625 94 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
HCFC2-205ENST00000550444 PHKA1P46020 1223 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 FCGRTP55899 365 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 PRKCZQ05513 592 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 GPAT2Q6NUI2 795 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 NKX2-3Q8TAU0 364 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 RNF208Q9H0X6 261 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 DENND2AQ9ULE3 1009 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 ZHX2Q9Y6X8 837 aa21.37■■□□□ 1.01
HCFC2-205ENST00000550444 RGS3P49796 1198 aa21.36■■□□□ 1.01
HCFC2-205ENST00000550444 UBXN2AP68543 259 aa21.36■■□□□ 1.01
HCFC2-205ENST00000550444 GADL1Q6ZQY3 521 aa21.36■■□□□ 1.01
HCFC2-205ENST00000550444 SMC4Q9NTJ3 1288 aa21.36■■□□□ 1.01
HCFC2-205ENST00000550444 CIAO1O76071 339 aa21.35■■□□□ 1.01
HCFC2-205ENST00000550444 GJB1P08034 283 aa21.35■■□□□ 1.01
HCFC2-205ENST00000550444 BCRP11274 1271 aa21.35■■□□□ 1.01
HCFC2-205ENST00000550444 GJA8P48165 433 aa21.35■■□□□ 1.01
HCFC2-205ENST00000550444 SCYL3Q8IZE3 742 aa21.35■■□□□ 1.01
HCFC2-205ENST00000550444 GABRQQ9UN88 632 aa21.35■■□□□ 1.01
HCFC2-205ENST00000550444 PA2G4Q9UQ80 394 aaKnown RBP21.35■■□□□ 1.01
HCFC2-205ENST00000550444 SALL1Q9NSC2 1324 aa21.34■■□□□ 1.01
HCFC2-205ENST00000550444 PHF20L1A8MW92 1017 aa21.34■■□□□ 1.01
HCFC2-205ENST00000550444 FASTKD5Q7L8L6 764 aaKnown RBP21.34■■□□□ 1.01
HCFC2-205ENST00000550444 ABCF2Q9UG63 623 aa21.34■■□□□ 1.01
HCFC2-205ENST00000550444 FBXO3Q9UK99 471 aa21.34■■□□□ 1.01
HCFC2-205ENST00000550444 LRRFIP2Q9Y608 721 aaKnown RBP21.34■■□□□ 1.01
HCFC2-205ENST00000550444 AK9Q5TCS8 1911 aa21.33■■□□□ 1.01
HCFC2-205ENST00000550444 SEMA3EO15041 775 aa21.33■■□□□ 1.01
HCFC2-205ENST00000550444 SLURP2P0DP57 97 aa21.33■■□□□ 1.01
HCFC2-205ENST00000550444 PTPRAP18433 802 aa21.33■■□□□ 1.01
HCFC2-205ENST00000550444 ADORA1P30542 326 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms