RNA–Protein interactions for RNA: ENST00000550391.5

CACNB3-216, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-216ENST00000550391 PSMD14O00487 310 aa16.93■□□□□ 0.3
CACNB3-216ENST00000550391 RAD17O75943 681 aa16.93■□□□□ 0.3
CACNB3-216ENST00000550391 LDHCP07864 332 aa16.93■□□□□ 0.3
CACNB3-216ENST00000550391 VIL1P09327 827 aaKnown RBP16.93■□□□□ 0.3
CACNB3-216ENST00000550391 PRPF38BQ5VTL8 546 aaKnown RBP16.93■□□□□ 0.3
CACNB3-216ENST00000550391 USP26Q9BXU7 913 aa16.93■□□□□ 0.3
CACNB3-216ENST00000550391 LSG1Q9H089 658 aaKnown RBP16.93■□□□□ 0.3
CACNB3-216ENST00000550391 MYH2Q9UKX2 1941 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 IQCA1LA6NCM1 817 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 FZD9O00144 591 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 GPAA1O43292 621 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 CXCL9Q07325 125 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 RSBN1LQ6PCB5 846 aaPredicted RBP16.92■□□□□ 0.3
CACNB3-216ENST00000550391 SLF2Q8IX21 1173 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 TSHZ2Q9NRE2 1034 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 MYO3BQ8WXR4 1341 aa16.92■□□□□ 0.3
CACNB3-216ENST00000550391 POTEIP0CG38 1075 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 POTEJP0CG39 1038 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 PTH1RQ03431 593 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 DIXDC1Q155Q3 683 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 CIAPIN1Q6FI81 312 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 FAM163AQ96GL9 167 aaPredicted RBP16.91■□□□□ 0.3
CACNB3-216ENST00000550391 RIOK1Q9BRS2 568 aaKnown RBP16.91■□□□□ 0.3
CACNB3-216ENST00000550391 TTF2Q9UNY4 1162 aaKnown RBP16.91■□□□□ 0.3
CACNB3-216ENST00000550391 MROH7-TTC4A0A0A0MT08 1334 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 GAKO14976 1311 aa16.91■□□□□ 0.3
CACNB3-216ENST00000550391 MAGEB6P1A0A0J9YX57 407 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 F8W031 263 aaPredicted RBP16.9■□□□□ 0.3
CACNB3-216ENST00000550391 MBD4O95243 580 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 ITGBL1O95965 494 aaPredicted RBP16.9■□□□□ 0.3
CACNB3-216ENST00000550391 LCORLQ8N3X6 602 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 MIGA1Q8NAN2 632 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 STRBPQ96SI9 672 aaKnown RBP16.9■□□□□ 0.3
CACNB3-216ENST00000550391 GMLQ99445 158 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 MRIQ9BWK5 157 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 C22orf23Q9BZE7 217 aa16.9■□□□□ 0.3
CACNB3-216ENST00000550391 EIF6P56537 245 aaKnown RBP16.89■□□□□ 0.29
CACNB3-216ENST00000550391 DYNLL1P63167 89 aaKnown RBP16.89■□□□□ 0.29
CACNB3-216ENST00000550391 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
CACNB3-216ENST00000550391 TNIP1Q15025 636 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 VPS53Q5VIR6 699 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 KIAA0825Q8IV33 1275 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 AGBL3Q8NEM8 1001 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 MAP4K1Q92918 833 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 TBC1D32Q96NH3 1257 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 NOL10Q9BSC4 688 aaKnown RBP16.89■□□□□ 0.29
CACNB3-216ENST00000550391 DSCC1Q9BVC3 393 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 MCOLN1Q9GZU1 580 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 ARMT1Q9H993 441 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 ADAMTSL1Q8N6G6 1762 aa16.89■□□□□ 0.29
CACNB3-216ENST00000550391 GPR75-ASB3A0A0A6YYF3 556 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 FOXP2O15409 715 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
CACNB3-216ENST00000550391 GNAT2P19087 354 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 MCCP23508 829 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 PPP4CP60510 307 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 HHIPL2Q6UWX4 724 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 AATFQ9NY61 560 aaKnown RBP eCLIP16.88■□□□□ 0.29
CACNB3-216ENST00000550391 DAGLAQ9Y4D2 1042 aa16.88■□□□□ 0.29
CACNB3-216ENST00000550391 BAG3O95817 575 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 CRKP46108 304 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 RBM25P49756 843 aaKnown RBP16.87■□□□□ 0.29
CACNB3-216ENST00000550391 SCNN1DP51172 638 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 CERS3Q8IU89 383 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 TEKT1Q969V4 418 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 SERPINA10Q9UK55 444 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 ZBTB12Q9Y330 459 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-216ENST00000550391 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
CACNB3-216ENST00000550391 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
CACNB3-216ENST00000550391 PATL2C9JE40 543 aaKnown RBP16.86■□□□□ 0.29
CACNB3-216ENST00000550391 HSPA4P34932 840 aa16.86■□□□□ 0.29
CACNB3-216ENST00000550391 ECE1P42892 770 aa16.86■□□□□ 0.29
CACNB3-216ENST00000550391 BTDP43251 543 aa16.86■□□□□ 0.29
CACNB3-216ENST00000550391 RBM8AQ9Y5S9 174 aaKnown RBP16.86■□□□□ 0.29
CACNB3-216ENST00000550391 RPAP1Q9BWH6 1393 aaPredicted RBP16.86■□□□□ 0.29
CACNB3-216ENST00000550391 GSG1L2A8MUP6 293 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 CA12O43570 354 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 PRKAB2O43741 272 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
CACNB3-216ENST00000550391 PLCG2P16885 1265 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 RPS12P25398 132 aaKnown RBP16.85■□□□□ 0.29
CACNB3-216ENST00000550391 NECTIN1Q15223 517 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 ZDHHC15Q96MV8 337 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 CTNNA3Q9UI47 895 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 SLC4A4Q9Y6R1 1079 aa16.85■□□□□ 0.29
CACNB3-216ENST00000550391 CDK5RAP2Q96SN8 1893 aa16.84■□□□□ 0.29
CACNB3-216ENST00000550391 APPP05067 770 aa16.84■□□□□ 0.29
CACNB3-216ENST00000550391 USP17L8P0C7I0 530 aa16.84■□□□□ 0.29
CACNB3-216ENST00000550391 RHBDL3P58872 404 aa16.84■□□□□ 0.29
CACNB3-216ENST00000550391 ALX1Q15699 326 aa16.84■□□□□ 0.29
CACNB3-216ENST00000550391 APOBEC3HQ6NTF7 200 aaKnown RBP16.84■□□□□ 0.29
CACNB3-216ENST00000550391 SH3RF3Q8TEJ3 882 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-216ENST00000550391 CRNKL1Q9BZJ0 848 aaKnown RBP16.84■□□□□ 0.29
CACNB3-216ENST00000550391 TAF1DQ9H5J8 278 aaPredicted RBP16.84■□□□□ 0.29
CACNB3-216ENST00000550391 HDAC9Q9UKV0 1011 aa16.84■□□□□ 0.29
CACNB3-216ENST00000550391 ABT1Q9ULW3 272 aaKnown RBP16.84■□□□□ 0.29
CACNB3-216ENST00000550391 ZMYM6O95789 1325 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 SCN4AP35499 1836 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 MMP14P50281 582 aa16.83■□□□□ 0.28
CACNB3-216ENST00000550391 RNF20Q5VTR2 975 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms