RNA–Protein interactions for RNA: ENST00000550325.5

VDR-208, Transcript of vitamin D receptor, humanhuman

TSL 1 (best) BASIC

Gene VDR, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDR-208ENST00000550325 CMA1P23946 247 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 NCAPH2Q6IBW4 605 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 ZNF530Q6P9A1 599 aaPredicted RBP13.83□□□□□ -0.2
VDR-208ENST00000550325 SAMSN1Q9NSI8 373 aaKnown RBP13.83□□□□□ -0.2
VDR-208ENST00000550325 PREX1Q8TCU6 1659 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 POTEB2H3BUK9 544 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 CDC27P30260 824 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 MYD88Q99836 296 aa13.83□□□□□ -0.2
VDR-208ENST00000550325 AKR1B15C9JRZ8 316 aaPredicted RBP13.82□□□□□ -0.2
VDR-208ENST00000550325 ERLIN2O94905 339 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 DDX58O95786 925 aaKnown RBP13.82□□□□□ -0.2
VDR-208ENST00000550325 CORO7P57737 925 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 PPARDQ03181 441 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 FKBP15Q5T1M5 1219 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 FAM71BQ8TC56 605 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 GBP3Q9H0R5 595 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 INTS13Q9NVM9 706 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 HECW2Q9P2P5 1572 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
VDR-208ENST00000550325 CCDC91Q7Z6B0 441 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 RALYLQ86SE5 291 aaKnown RBP13.82□□□□□ -0.2
VDR-208ENST00000550325 JMYQ8N9B5 988 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 ACRBPQ8NEB7 543 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 SNRKQ9NRH2 765 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 IGSF1Q8N6C5 1336 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 LRRIQ3A6PVS8 624 aaPredicted RBP13.82□□□□□ -0.2
VDR-208ENST00000550325 TNNI3KQ59H18 835 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 TADA2BQ86TJ2 420 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 TMEM139Q8IV31 216 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 CRACR2AQ9BSW2 395 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 L1RE1Q9UN81 338 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 FPGT-TNNI3KV9GXZ4 949 aa13.82□□□□□ -0.2
VDR-208ENST00000550325 MYO5BQ9ULV0 1848 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 RICTORQ6R327 1708 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 HSPA2P54652 639 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 USPL1Q5W0Q7 1092 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 FBXW10Q5XX13 1052 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 GSPT2Q8IYD1 628 aaKnown RBP13.81□□□□□ -0.2
VDR-208ENST00000550325 IGSF22Q8N9C0 903 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 POLR3EQ9NVU0 708 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 ZNF609O15014 1411 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 NOA1Q8NC60 698 aaKnown RBP13.81□□□□□ -0.2
VDR-208ENST00000550325 CAGE1Q8TC20 777 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 KCNH3Q9ULD8 1083 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 EPHA10Q5JZY3 1008 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 CCDC82Q8N4S0 544 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 ABTB2Q8N961 1025 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 ANKRD20A12PQ8NF67 263 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 ALG1Q9BT22 464 aa13.81□□□□□ -0.2
VDR-208ENST00000550325 ENC1O14682 589 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 KAZALD1Q96I82 304 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 GUCA1BQ9UMX6 200 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 TEX33O43247 280 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 PRC1O43663 620 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 PPFIA4O75335 1185 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 MYCNP04198 464 aaPredicted RBP13.8□□□□□ -0.2
VDR-208ENST00000550325 MAP2K2P36507 400 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 TIMM10P62072 90 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 FMR1Q06787 632 aaKnown RBP eCLIP13.8□□□□□ -0.2
VDR-208ENST00000550325 RBL2Q08999 1139 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 TRIM29Q14134 588 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 RAD9BQ6WBX8 426 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 DHX37Q8IY37 1157 aaKnown RBP13.8□□□□□ -0.2
VDR-208ENST00000550325 IQUBQ8NA54 791 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 CCDC148Q8NFR7 591 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 LINS1Q8NG48 757 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 PHKBQ93100 1093 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 C19orf44Q9H6X5 657 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 CEP170BQ9Y4F5 1589 aaPredicted RBP13.8□□□□□ -0.2
VDR-208ENST00000550325 ATP5J2-PTCD1G3V325 749 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 PTCD1O75127 700 aaKnown RBP13.8□□□□□ -0.2
VDR-208ENST00000550325 TRDNQ13061 729 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 MCTP2Q6DN12 878 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 SHC4Q6S5L8 630 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 MMS22LQ6ZRQ5 1243 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 UBE3BQ7Z3V4 1068 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 EFCAB13Q8IY85 973 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 SAMM50Q9Y512 469 aa13.8□□□□□ -0.2
VDR-208ENST00000550325 HOXC9P31274 260 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 SETQ01105 290 aaPredicted RBP13.79□□□□□ -0.2
VDR-208ENST00000550325 BRAPQ7Z569 592 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 CENPHQ9H3R5 247 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 SBNO1A3KN83 1393 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 CLTCQ00610 1675 aaKnown RBP13.79□□□□□ -0.2
VDR-208ENST00000550325 EBAG9O00559 213 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 ATP5JP18859 108 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 CCT6AP40227 531 aaKnown RBP13.79□□□□□ -0.2
VDR-208ENST00000550325 METTL16Q86W50 562 aaKnown RBP13.79□□□□□ -0.2
VDR-208ENST00000550325 NAPGQ99747 312 aaPredicted RBP13.79□□□□□ -0.2
VDR-208ENST00000550325 ABL1P00519 1130 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 HSPD1P10809 573 aaKnown RBP13.79□□□□□ -0.2
VDR-208ENST00000550325 AFMP43652 599 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 MICU3Q86XE3 530 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 VPS37DQ86XT2 251 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 BANK1Q8NDB2 785 aa13.79□□□□□ -0.2
VDR-208ENST00000550325 POLR2DO15514 142 aaKnown RBP13.78□□□□□ -0.2
VDR-208ENST00000550325 KIF23Q02241 960 aaPredicted RBP13.78□□□□□ -0.2
VDR-208ENST00000550325 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
VDR-208ENST00000550325 FOXP4Q8IVH2 680 aaPredicted RBP13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms