RNA–Protein interactions for RNA: ENST00000549131.1

LINC00661-203, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best)

Gene LINC00661, Length 512 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-203ENST00000549131 FKBP1CQ5VVH2 108 aa18.1■□□□□ 0.49
LINC00661-203ENST00000549131 PI16Q6UXB8 463 aa18.1■□□□□ 0.49
LINC00661-203ENST00000549131 FAM83AQ86UY5 434 aa18.1■□□□□ 0.49
LINC00661-203ENST00000549131 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
LINC00661-203ENST00000549131 CDK5RAP2Q96SN8 1893 aa18.09■□□□□ 0.49
LINC00661-203ENST00000549131 ARID4AP29374 1257 aaPredicted RBP18.09■□□□□ 0.49
LINC00661-203ENST00000549131 TNNI3KQ59H18 835 aa18.09■□□□□ 0.49
LINC00661-203ENST00000549131 SPTY2D1Q68D10 685 aaPredicted RBP18.09■□□□□ 0.49
LINC00661-203ENST00000549131 CDC42EP5Q6NZY7 148 aa18.09■□□□□ 0.49
LINC00661-203ENST00000549131 CEP85Q6P2H3 762 aa18.09■□□□□ 0.49
LINC00661-203ENST00000549131 FPGT-TNNI3KV9GXZ4 949 aa18.09■□□□□ 0.49
LINC00661-203ENST00000549131 MANSC4A6NHS7 340 aaPredicted RBP18.08■□□□□ 0.48
LINC00661-203ENST00000549131 TM4SF4P48230 202 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 TCP10Q12799 353 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 SPATA5Q8NB90 893 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 HOOK2Q96ED9 719 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 GPR108Q9NPR9 543 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 HMG20BQ9P0W2 317 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 CSADQ9Y600 493 aa18.08■□□□□ 0.48
LINC00661-203ENST00000549131 GAKO14976 1311 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 UQCRFS1P1P0C7P4 283 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 MCAMP43121 646 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 NFIAQ12857 509 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 DGKZQ13574 1117 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 VGLL4Q14135 290 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 TTC39AQ5SRH9 613 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 ERICH6Q7L0X2 663 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 SLF2Q8IX21 1173 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.07■□□□□ 0.48
LINC00661-203ENST00000549131 OPTNQ96CV9 577 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 ABHD8Q96I13 439 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 USP40Q9NVE5 1235 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 COG6Q9Y2V7 657 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 FOCADQ5VW36 1801 aa18.07■□□□□ 0.48
LINC00661-203ENST00000549131 MROH7-TTC4A0A0A0MT08 1334 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 TBC1D8O95759 1140 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 GJA5P36382 358 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 MECOMQ03112 1051 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 DCAF15Q66K64 600 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.06■□□□□ 0.48
LINC00661-203ENST00000549131 FAM151AQ8WW52 585 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 WRNIP1Q96S55 665 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 DBNDD2Q9BQY9 259 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 MCOLN1Q9GZU1 580 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 DDX19BQ9UMR2 479 aa18.06■□□□□ 0.48
LINC00661-203ENST00000549131 NOP58Q9Y2X3 529 aaKnown RBP18.06■□□□□ 0.48
LINC00661-203ENST00000549131 DOCK1Q14185 1865 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 RFX7Q2KHR2 1363 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 BTDP43251 543 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 MAP3K9P80192 1104 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 CCDC158Q5M9N0 1113 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 TBC1D9Q6ZT07 1266 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 RAI14Q9P0K7 980 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 EXOC6BQ9Y2D4 811 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 ATAD5Q96QE3 1844 aa18.05■□□□□ 0.48
LINC00661-203ENST00000549131 MIGA2Q7L4E1 593 aa18.04■□□□□ 0.48
LINC00661-203ENST00000549131 IFNL1Q8IU54 200 aa18.04■□□□□ 0.48
LINC00661-203ENST00000549131 CNKSR2Q8WXI2 1034 aa18.04■□□□□ 0.48
LINC00661-203ENST00000549131 OTUD5Q96G74 571 aa18.04■□□□□ 0.48
LINC00661-203ENST00000549131 SNRKQ9NRH2 765 aa18.04■□□□□ 0.48
LINC00661-203ENST00000549131 FAM198AQ9UFP1 575 aa18.04■□□□□ 0.48
LINC00661-203ENST00000549131 IGF2BP3O00425 579 aaKnown RBP eCLIP18.03■□□□□ 0.48
LINC00661-203ENST00000549131 ALDH1A1P00352 501 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 RGS3P49796 1198 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 INHBEP58166 350 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 GSTO1P78417 241 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 ERC1Q8IUD2 1116 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 ZNF341Q9BYN7 854 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 TLR7Q9NYK1 1049 aaKnown RBP18.03■□□□□ 0.48
LINC00661-203ENST00000549131 LRP2BPQ9P2M1 347 aa18.03■□□□□ 0.48
LINC00661-203ENST00000549131 DBNLQ9UJU6 430 aaKnown RBP18.03■□□□□ 0.48
LINC00661-203ENST00000549131 PICALMQ13492 652 aa18.02■□□□□ 0.48
LINC00661-203ENST00000549131 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.02■□□□□ 0.48
LINC00661-203ENST00000549131 ZNF384Q8TF68 577 aa18.02■□□□□ 0.48
LINC00661-203ENST00000549131 ZNF296Q8WUU4 475 aaPredicted RBP18.02■□□□□ 0.48
LINC00661-203ENST00000549131 ZKSCAN4Q969J2 545 aaPredicted RBP18.02■□□□□ 0.48
LINC00661-203ENST00000549131 NSUN4Q96CB9 384 aaKnown RBP18.02■□□□□ 0.48
LINC00661-203ENST00000549131 SNCAIPQ9Y6H5 919 aa18.02■□□□□ 0.48
LINC00661-203ENST00000549131 ZSCAN29Q8IWY8 852 aaPredicted RBP18.01■□□□□ 0.47
LINC00661-203ENST00000549131 FAM163AQ96GL9 167 aaPredicted RBP18.01■□□□□ 0.47
LINC00661-203ENST00000549131 IDI2Q9BXS1 227 aa18.01■□□□□ 0.47
LINC00661-203ENST00000549131 CCDC8Q9H0W5 538 aaPredicted RBP18.01■□□□□ 0.47
LINC00661-203ENST00000549131 PTPRFP10586 1907 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 SPDYE5A6NIY4 337 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 GPR25O00155 361 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 HMMRO75330 724 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 ENTPD3O75355 529 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 WDHD1O75717 1129 aaPredicted RBP18■□□□□ 0.47
LINC00661-203ENST00000549131 LDHCP07864 332 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 HSP90AB4PQ58FF6 505 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 OTUD7BQ6GQQ9 843 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 CTU1Q7Z7A3 348 aaKnown RBP18■□□□□ 0.47
LINC00661-203ENST00000549131 AACSQ86V21 672 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 ZFPM1Q8IX07 1006 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 EAF2Q96CJ1 260 aaPredicted RBP18■□□□□ 0.47
LINC00661-203ENST00000549131 CFHR5Q9BXR6 569 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 CHMP4BQ9H444 224 aaKnown RBP18■□□□□ 0.47
LINC00661-203ENST00000549131 ZBTB40Q9NUA8 1239 aa18■□□□□ 0.47
LINC00661-203ENST00000549131 GPR75-ASB3A0A0A6YYF3 556 aa17.99■□□□□ 0.47
LINC00661-203ENST00000549131 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms