RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 ZNF112Q9UJU3 913 aa17.11■□□□□ 0.33
CDX2-202ENST00000548877 CAPN2P17655 700 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 CACNB3P54284 484 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 MOGSQ13724 837 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 DPF3Q92784 378 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 HTATIP2Q9BUP3 242 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
CDX2-202ENST00000548877 UTYO14607 1347 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 MAST3O60307 1309 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 MGAMO43451 1857 aa17.1■□□□□ 0.33
CDX2-202ENST00000548877 A0A1W2PPC1 479 aa17.09■□□□□ 0.33
CDX2-202ENST00000548877 RABL6Q3YEC7 729 aaPredicted RBP17.09■□□□□ 0.33
CDX2-202ENST00000548877 VGLL2Q8N8G2 317 aa17.09■□□□□ 0.33
CDX2-202ENST00000548877 CPA4Q9UI42 421 aa17.09■□□□□ 0.33
CDX2-202ENST00000548877 KIF16BQ96L93 1317 aa17.09■□□□□ 0.33
CDX2-202ENST00000548877 PDHXO00330 501 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 BCRP11274 1271 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 CCL5P13501 91 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 EXOSC9Q06265 439 aaKnown RBP17.08■□□□□ 0.32
CDX2-202ENST00000548877 CAVIN4Q5BKX8 364 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 NOL9Q5SY16 702 aaKnown RBP17.08■□□□□ 0.32
CDX2-202ENST00000548877 VPS37DQ86XT2 251 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.08■□□□□ 0.32
CDX2-202ENST00000548877 RAET1EQ8TD07 263 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 SUCLG2Q96I99 432 aa17.08■□□□□ 0.32
CDX2-202ENST00000548877 MYPNQ86TC9 1320 aa17.07■□□□□ 0.32
CDX2-202ENST00000548877 PDE8BO95263 885 aa17.07■□□□□ 0.32
CDX2-202ENST00000548877 INPP5BP32019 993 aa17.07■□□□□ 0.32
CDX2-202ENST00000548877 CHAF1AQ13111 956 aaPredicted RBP17.07■□□□□ 0.32
CDX2-202ENST00000548877 FAM151AQ8WW52 585 aa17.07■□□□□ 0.32
CDX2-202ENST00000548877 SRCIN1Q9C0H9 1055 aa17.07■□□□□ 0.32
CDX2-202ENST00000548877 IQSEC3Q9UPP2 1182 aaPredicted RBP17.07■□□□□ 0.32
CDX2-202ENST00000548877 NR2E3Q9Y5X4 410 aa17.07■□□□□ 0.32
CDX2-202ENST00000548877 COL6A3P12111 3177 aa17.06■□□□□ 0.32
CDX2-202ENST00000548877 ZBTB7BO15156 539 aaPredicted RBP17.06■□□□□ 0.32
CDX2-202ENST00000548877 FMNL1O95466 1100 aaPredicted RBP17.06■□□□□ 0.32
CDX2-202ENST00000548877 UBXN2AP68543 259 aa17.06■□□□□ 0.32
CDX2-202ENST00000548877 CCDC184Q52MB2 194 aa17.06■□□□□ 0.32
CDX2-202ENST00000548877 RNF208Q9H0X6 261 aa17.06■□□□□ 0.32
CDX2-202ENST00000548877 CXCL11O14625 94 aa17.05■□□□□ 0.32
CDX2-202ENST00000548877 FRAT2O75474 233 aaPredicted RBP17.05■□□□□ 0.32
CDX2-202ENST00000548877 NBPF7P0C2Y1 421 aaPredicted RBP17.05■□□□□ 0.32
CDX2-202ENST00000548877 FGFR2P21802 821 aa17.05■□□□□ 0.32
CDX2-202ENST00000548877 LRRC24Q50LG9 513 aa17.05■□□□□ 0.32
CDX2-202ENST00000548877 GPAT2Q6NUI2 795 aa17.05■□□□□ 0.32
CDX2-202ENST00000548877 MIGA2Q7L4E1 593 aa17.05■□□□□ 0.32
CDX2-202ENST00000548877 SLAIN1Q8ND83 568 aa17.05■□□□□ 0.32
CDX2-202ENST00000548877 SGPL1O95470 568 aa17.04■□□□□ 0.32
CDX2-202ENST00000548877 BCAMP50895 628 aa17.04■□□□□ 0.32
CDX2-202ENST00000548877 FCGRTP55899 365 aa17.04■□□□□ 0.32
CDX2-202ENST00000548877 METTL24Q5JXM2 366 aa17.04■□□□□ 0.32
CDX2-202ENST00000548877 U2AF1L4Q8WU68 220 aaKnown RBP17.04■□□□□ 0.32
CDX2-202ENST00000548877 PARK7Q99497 189 aaKnown RBP17.04■□□□□ 0.32
CDX2-202ENST00000548877 AK9Q5TCS8 1911 aa17.04■□□□□ 0.32
CDX2-202ENST00000548877 MYH13Q9UKX3 1938 aa17.04■□□□□ 0.32
CDX2-202ENST00000548877 FARP2O94887 1054 aaPredicted RBP17.03■□□□□ 0.32
CDX2-202ENST00000548877 PRKCZQ05513 592 aa17.03■□□□□ 0.32
CDX2-202ENST00000548877 ANKRD44Q8N8A2 993 aa17.03■□□□□ 0.32
CDX2-202ENST00000548877 BICC1Q9H694 974 aaKnown RBP17.03■□□□□ 0.32
CDX2-202ENST00000548877 A0A0C4DFX4 3053 aa17.03■□□□□ 0.32
CDX2-202ENST00000548877 WDR66Q8TBY9 1149 aa17.02■□□□□ 0.32
CDX2-202ENST00000548877 PXYLP1Q8TE99 480 aa17.02■□□□□ 0.32
CDX2-202ENST00000548877 SLC45A1Q9Y2W3 748 aa17.02■□□□□ 0.32
CDX2-202ENST00000548877 LAMA3Q16787 3333 aa17.02■□□□□ 0.31
CDX2-202ENST00000548877 ZBTB22O15209 634 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 IFIT1P09914 478 aaKnown RBP17.01■□□□□ 0.31
CDX2-202ENST00000548877 IRF5Q13568 498 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 PUM3Q15397 648 aaKnown RBP17.01■□□□□ 0.31
CDX2-202ENST00000548877 CDC42EP5Q6NZY7 148 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 SLC4A10Q6U841 1118 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 UNC93B1Q9H1C4 597 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 SPINK5Q9NQ38 1064 aaPredicted RBP17.01■□□□□ 0.31
CDX2-202ENST00000548877 BIN2Q9UBW5 565 aaPredicted RBP17.01■□□□□ 0.31
CDX2-202ENST00000548877 GABRQQ9UN88 632 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 DAGLAQ9Y4D2 1042 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 PTPRFP10586 1907 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 ATRNL1Q5VV63 1379 aa17.01■□□□□ 0.31
CDX2-202ENST00000548877 A0A0G2JLL6 359 aaPredicted RBP17■□□□□ 0.31
CDX2-202ENST00000548877 PHF20L1A8MW92 1017 aa17■□□□□ 0.31
CDX2-202ENST00000548877 DLL1O00548 723 aa17■□□□□ 0.31
CDX2-202ENST00000548877 MAP3K10Q02779 954 aa17■□□□□ 0.31
CDX2-202ENST00000548877 FASTKD5Q7L8L6 764 aaKnown RBP17■□□□□ 0.31
CDX2-202ENST00000548877 PRRT2Q7Z6L0 340 aaPredicted RBP17■□□□□ 0.31
CDX2-202ENST00000548877 DOCK3Q8IZD9 2030 aa17■□□□□ 0.31
CDX2-202ENST00000548877 SLC17A8Q8NDX2 589 aa17■□□□□ 0.31
CDX2-202ENST00000548877 PAK6Q9NQU5 681 aaPredicted RBP17■□□□□ 0.31
CDX2-202ENST00000548877 FAM198AQ9UFP1 575 aa17■□□□□ 0.31
CDX2-202ENST00000548877 ALPK3Q96L96 1907 aa17■□□□□ 0.31
CDX2-202ENST00000548877 ADCY3O60266 1144 aa16.99■□□□□ 0.31
CDX2-202ENST00000548877 ECM2O94769 699 aaPredicted RBP16.99■□□□□ 0.31
CDX2-202ENST00000548877 CYP2C8P10632 490 aa16.99■□□□□ 0.31
CDX2-202ENST00000548877 NFIAQ12857 509 aa16.99■□□□□ 0.31
CDX2-202ENST00000548877 CRISPLD2Q9H0B8 497 aa16.99■□□□□ 0.31
CDX2-202ENST00000548877 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
CDX2-202ENST00000548877 FLT3LGP49771 235 aa16.98■□□□□ 0.31
CDX2-202ENST00000548877 TCP10Q12799 353 aa16.98■□□□□ 0.31
CDX2-202ENST00000548877 GPR153Q6NV75 609 aa16.98■□□□□ 0.31
CDX2-202ENST00000548877 DOCK2Q92608 1830 aa16.98■□□□□ 0.31
CDX2-202ENST00000548877 SALL1Q9NSC2 1324 aa16.97■□□□□ 0.31
CDX2-202ENST00000548877 SOX1O00570 391 aaPredicted RBP16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms