RNA–Protein interactions for RNA: ENST00000547758.1

CCDC59-202, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 553 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-202ENST00000547758 CACNB3P54284 484 aa17.08■□□□□ 0.32
CCDC59-202ENST00000547758 C17orf99Q6UX52 265 aa17.08■□□□□ 0.32
CCDC59-202ENST00000547758 TRIM47Q96LD4 638 aa17.08■□□□□ 0.32
CCDC59-202ENST00000547758 HTATIP2Q9BUP3 242 aa17.08■□□□□ 0.32
CCDC59-202ENST00000547758 GRK4P32298 578 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 PSMC4P43686 418 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 GJA8P48165 433 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 HDLBPQ00341 1268 aaKnown RBP17.07■□□□□ 0.32
CCDC59-202ENST00000547758 GRIK5Q16478 980 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 CCDC27Q2M243 656 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 BEND3Q5T5X7 828 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 UBE2Q1Q7Z7E8 422 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 RAET1EQ8TD07 263 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 PRO3102Q9H379 93 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 CPA4Q9UI42 421 aa17.07■□□□□ 0.32
CCDC59-202ENST00000547758 CUL9Q8IWT3 2517 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 F6X3S4 739 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 GJB1P08034 283 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 OSBPP22059 807 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 HOXD10P28358 340 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 FAM83AQ86UY5 434 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 WWC1Q8IX03 1113 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 TEKT1Q969V4 418 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 TMOD2Q9NZR1 351 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 RIPOR2Q9Y4F9 1068 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 ALPK3Q96L96 1907 aa17.06■□□□□ 0.32
CCDC59-202ENST00000547758 RPAP1Q9BWH6 1393 aaPredicted RBP17.05■□□□□ 0.32
CCDC59-202ENST00000547758 IL16Q14005 1332 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 MYPNQ86TC9 1320 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 ADGRA2Q96PE1 1338 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 GRM8O00222 908 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 DLL1O00548 723 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 FMNL1O95466 1100 aaPredicted RBP17.05■□□□□ 0.32
CCDC59-202ENST00000547758 CCL5P13501 91 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 PPATQ06203 517 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 CHAF1AQ13111 956 aaPredicted RBP17.05■□□□□ 0.32
CCDC59-202ENST00000547758 DCAF15Q66K64 600 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 ANKRD23Q86SG2 305 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.05■□□□□ 0.32
CCDC59-202ENST00000547758 SLC17A8Q8NDX2 589 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 TBC1D22AQ8WUA7 517 aa17.05■□□□□ 0.32
CCDC59-202ENST00000547758 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
CCDC59-202ENST00000547758 A0A0C4DFX4 3053 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 FKBP1CQ5VVH2 108 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 VPS37DQ86XT2 251 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 ZDHHC15Q96MV8 337 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 DCBLD2Q96PD2 775 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 PUS3Q9BZE2 481 aaKnown RBP17.04■□□□□ 0.32
CCDC59-202ENST00000547758 RNF208Q9H0X6 261 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 NR2E3Q9Y5X4 410 aa17.04■□□□□ 0.32
CCDC59-202ENST00000547758 FANCIQ9NVI1 1328 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 DOCK3Q8IZD9 2030 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 PDHXO00330 501 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 UBXN2AP68543 259 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 FBXO33Q7Z6M2 555 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 ZNF341Q9BYN7 854 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 BIN2Q9UBW5 565 aaPredicted RBP17.03■□□□□ 0.32
CCDC59-202ENST00000547758 PTPRFP10586 1907 aa17.03■□□□□ 0.32
CCDC59-202ENST00000547758 MROH5Q6ZUA9 1318 aa17.02■□□□□ 0.32
CCDC59-202ENST00000547758 ZBTB7BO15156 539 aaPredicted RBP17.02■□□□□ 0.32
CCDC59-202ENST00000547758 VAMP4O75379 141 aa17.02■□□□□ 0.32
CCDC59-202ENST00000547758 FRAT2O75474 233 aaPredicted RBP17.02■□□□□ 0.32
CCDC59-202ENST00000547758 FARP2O94887 1054 aaPredicted RBP17.02■□□□□ 0.32
CCDC59-202ENST00000547758 INPP5BP32019 993 aa17.02■□□□□ 0.32
CCDC59-202ENST00000547758 C9orf78Q9NZ63 289 aaPredicted RBP17.02■□□□□ 0.32
CCDC59-202ENST00000547758 DOCK2Q92608 1830 aa17.02■□□□□ 0.31
CCDC59-202ENST00000547758 MAST3O60307 1309 aa17.01■□□□□ 0.31
CCDC59-202ENST00000547758 A0A1W2PPC1 479 aa17.01■□□□□ 0.31
CCDC59-202ENST00000547758 PRKCZQ05513 592 aa17.01■□□□□ 0.31
CCDC59-202ENST00000547758 APOBEC3HQ6NTF7 200 aaKnown RBP17.01■□□□□ 0.31
CCDC59-202ENST00000547758 MIGA2Q7L4E1 593 aa17.01■□□□□ 0.31
CCDC59-202ENST00000547758 U2AF1L4Q8WU68 220 aaKnown RBP17.01■□□□□ 0.31
CCDC59-202ENST00000547758 MRIQ9BWK5 157 aa17.01■□□□□ 0.31
CCDC59-202ENST00000547758 KCNH4Q9UQ05 1017 aa17.01■□□□□ 0.31
CCDC59-202ENST00000547758 FCGRTP55899 365 aa17■□□□□ 0.31
CCDC59-202ENST00000547758 CAVIN4Q5BKX8 364 aa17■□□□□ 0.31
CCDC59-202ENST00000547758 SLAIN1Q8ND83 568 aa17■□□□□ 0.31
CCDC59-202ENST00000547758 PARK7Q99497 189 aaKnown RBP17■□□□□ 0.31
CCDC59-202ENST00000547758 MNX1P50219 401 aaPredicted RBP16.99■□□□□ 0.31
CCDC59-202ENST00000547758 MOGSQ13724 837 aa16.99■□□□□ 0.31
CCDC59-202ENST00000547758 UNC93B1Q9H1C4 597 aa16.99■□□□□ 0.31
CCDC59-202ENST00000547758 SUGT1Q9Y2Z0 365 aa16.99■□□□□ 0.31
CCDC59-202ENST00000547758 SOX1O00570 391 aaPredicted RBP16.98■□□□□ 0.31
CCDC59-202ENST00000547758 ALDH1L1O75891 902 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 SGPL1O95470 568 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 BCRP11274 1271 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 HHIPL2Q6UWX4 724 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 FAM151AQ8WW52 585 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 KAZALD1Q96I82 304 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 SUCLG2Q96I99 432 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 ZNF112Q9UJU3 913 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 PHIPQ8WWQ0 1821 aa16.98■□□□□ 0.31
CCDC59-202ENST00000547758 EVI5O60447 810 aa16.97■□□□□ 0.31
CCDC59-202ENST00000547758 EXOSC9Q06265 439 aaKnown RBP16.97■□□□□ 0.31
CCDC59-202ENST00000547758 METTL24Q5JXM2 366 aa16.97■□□□□ 0.31
CCDC59-202ENST00000547758 NOL9Q5SY16 702 aaKnown RBP16.97■□□□□ 0.31
CCDC59-202ENST00000547758 GABRQQ9UN88 632 aa16.97■□□□□ 0.31
CCDC59-202ENST00000547758 GALR2O43603 387 aaPredicted RBP16.96■□□□□ 0.31
CCDC59-202ENST00000547758 CYP2C8P10632 490 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms