RNA–Protein interactions for RNA: ENST00000547715.1

PTPRB-205, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 2

Gene PTPRB, Length 639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-205ENST00000547715 FAM83AQ86UY5 434 aa18.35■□□□□ 0.53
PTPRB-205ENST00000547715 TBC1D22AQ8WUA7 517 aa18.35■□□□□ 0.53
PTPRB-205ENST00000547715 C9orf78Q9NZ63 289 aaPredicted RBP18.35■□□□□ 0.53
PTPRB-205ENST00000547715 MIGA2Q7L4E1 593 aa18.34■□□□□ 0.53
PTPRB-205ENST00000547715 UBE2Q1Q7Z7E8 422 aa18.34■□□□□ 0.53
PTPRB-205ENST00000547715 ANKRD23Q86SG2 305 aa18.34■□□□□ 0.53
PTPRB-205ENST00000547715 PRO3102Q9H379 93 aa18.34■□□□□ 0.53
PTPRB-205ENST00000547715 IL16Q14005 1332 aa18.33■□□□□ 0.53
PTPRB-205ENST00000547715 FANCIQ9NVI1 1328 aa18.33■□□□□ 0.53
PTPRB-205ENST00000547715 VAMP4O75379 141 aa18.33■□□□□ 0.52
PTPRB-205ENST00000547715 INPP5BP32019 993 aa18.33■□□□□ 0.52
PTPRB-205ENST00000547715 UBXN2AP68543 259 aa18.33■□□□□ 0.52
PTPRB-205ENST00000547715 ZDHHC15Q96MV8 337 aa18.33■□□□□ 0.52
PTPRB-205ENST00000547715 ZNF341Q9BYN7 854 aa18.33■□□□□ 0.52
PTPRB-205ENST00000547715 MROH5Q6ZUA9 1318 aa18.32■□□□□ 0.52
PTPRB-205ENST00000547715 MYH13Q9UKX3 1938 aa18.32■□□□□ 0.52
PTPRB-205ENST00000547715 CAVIN4Q5BKX8 364 aa18.32■□□□□ 0.52
PTPRB-205ENST00000547715 FKBP1CQ5VVH2 108 aa18.32■□□□□ 0.52
PTPRB-205ENST00000547715 APOBEC3HQ6NTF7 200 aaKnown RBP18.32■□□□□ 0.52
PTPRB-205ENST00000547715 FBXO33Q7Z6M2 555 aa18.32■□□□□ 0.52
PTPRB-205ENST00000547715 U2AF1L4Q8WU68 220 aaKnown RBP18.32■□□□□ 0.52
PTPRB-205ENST00000547715 RPAP1Q9BWH6 1393 aaPredicted RBP18.31■□□□□ 0.52
PTPRB-205ENST00000547715 ADGRA2Q96PE1 1338 aa18.31■□□□□ 0.52
PTPRB-205ENST00000547715 FARP2O94887 1054 aaPredicted RBP18.31■□□□□ 0.52
PTPRB-205ENST00000547715 PRKCZQ05513 592 aa18.31■□□□□ 0.52
PTPRB-205ENST00000547715 MAST3O60307 1309 aa18.3■□□□□ 0.52
PTPRB-205ENST00000547715 ZBTB7BO15156 539 aaPredicted RBP18.3■□□□□ 0.52
PTPRB-205ENST00000547715 MRIQ9BWK5 157 aa18.3■□□□□ 0.52
PTPRB-205ENST00000547715 KCNH4Q9UQ05 1017 aa18.3■□□□□ 0.52
PTPRB-205ENST00000547715 EVI5O60447 810 aa18.29■□□□□ 0.52
PTPRB-205ENST00000547715 FCGRTP55899 365 aa18.29■□□□□ 0.52
PTPRB-205ENST00000547715 EXOSC9Q06265 439 aaKnown RBP18.29■□□□□ 0.52
PTPRB-205ENST00000547715 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
PTPRB-205ENST00000547715 SLAIN1Q8ND83 568 aa18.29■□□□□ 0.52
PTPRB-205ENST00000547715 PARK7Q99497 189 aaKnown RBP18.29■□□□□ 0.52
PTPRB-205ENST00000547715 UNC93B1Q9H1C4 597 aa18.29■□□□□ 0.52
PTPRB-205ENST00000547715 A0A1W2PPC1 479 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 SGPL1O95470 568 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 CYP2C8P10632 490 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 BCAMP50895 628 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 MOGSQ13724 837 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 METTL24Q5JXM2 366 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 FAM151AQ8WW52 585 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 SUCLG2Q96I99 432 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 GABRQQ9UN88 632 aa18.28■□□□□ 0.52
PTPRB-205ENST00000547715 SOX1O00570 391 aaPredicted RBP18.27■□□□□ 0.52
PTPRB-205ENST00000547715 ALDH1L1O75891 902 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 BCRP11274 1271 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 TCP10Q12799 353 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 LRRC24Q50LG9 513 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 HHIPL2Q6UWX4 724 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 KAZALD1Q96I82 304 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 LRCH3Q96II8 777 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 SRCIN1Q9C0H9 1055 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 SUGT1Q9Y2Z0 365 aa18.27■□□□□ 0.52
PTPRB-205ENST00000547715 ALPK3Q96L96 1907 aa18.26■□□□□ 0.51
PTPRB-205ENST00000547715 ADCY3O60266 1144 aa18.26■□□□□ 0.51
PTPRB-205ENST00000547715 PDE8BO95263 885 aa18.26■□□□□ 0.51
PTPRB-205ENST00000547715 ZNF112Q9UJU3 913 aa18.26■□□□□ 0.51
PTPRB-205ENST00000547715 TFRCP02786 760 aaKnown RBP18.25■□□□□ 0.51
PTPRB-205ENST00000547715 NBPF7P0C2Y1 421 aaPredicted RBP18.25■□□□□ 0.51
PTPRB-205ENST00000547715 ELNP15502 786 aa18.25■□□□□ 0.51
PTPRB-205ENST00000547715 VGLL2Q8N8G2 317 aa18.25■□□□□ 0.51
PTPRB-205ENST00000547715 STAP2Q9UGK3 403 aa18.25■□□□□ 0.51
PTPRB-205ENST00000547715 FLT3LGP49771 235 aa18.24■□□□□ 0.51
PTPRB-205ENST00000547715 CCDC184Q52MB2 194 aa18.24■□□□□ 0.51
PTPRB-205ENST00000547715 NOL9Q5SY16 702 aaKnown RBP18.24■□□□□ 0.51
PTPRB-205ENST00000547715 GPAT2Q6NUI2 795 aa18.24■□□□□ 0.51
PTPRB-205ENST00000547715 DEFB118Q96PH6 123 aa18.24■□□□□ 0.51
PTPRB-205ENST00000547715 BICC1Q9H694 974 aaKnown RBP18.24■□□□□ 0.51
PTPRB-205ENST00000547715 SALL2Q9Y467 1007 aaPredicted RBP18.24■□□□□ 0.51
PTPRB-205ENST00000547715 UNC80Q8N2C7 3258 aa18.24■□□□□ 0.51
PTPRB-205ENST00000547715 DOCK2Q92608 1830 aa18.23■□□□□ 0.51
PTPRB-205ENST00000547715 PTPRFP10586 1907 aa18.23■□□□□ 0.51
PTPRB-205ENST00000547715 DOCK3Q8IZD9 2030 aa18.23■□□□□ 0.51
PTPRB-205ENST00000547715 CXCL11O14625 94 aa18.23■□□□□ 0.51
PTPRB-205ENST00000547715 INHAP05111 366 aa18.23■□□□□ 0.51
PTPRB-205ENST00000547715 NFIAQ12857 509 aa18.23■□□□□ 0.51
PTPRB-205ENST00000547715 TNPO2O14787 897 aaKnown RBP18.22■□□□□ 0.51
PTPRB-205ENST00000547715 IFIT1P09914 478 aaKnown RBP18.22■□□□□ 0.51
PTPRB-205ENST00000547715 DIXDC1Q155Q3 683 aa18.22■□□□□ 0.51
PTPRB-205ENST00000547715 CDC42EP5Q6NZY7 148 aa18.22■□□□□ 0.51
PTPRB-205ENST00000547715 KLHDC4Q8TBB5 520 aa18.22■□□□□ 0.51
PTPRB-205ENST00000547715 WDR66Q8TBY9 1149 aa18.22■□□□□ 0.51
PTPRB-205ENST00000547715 TAOK2Q9UL54 1235 aa18.22■□□□□ 0.51
PTPRB-205ENST00000547715 DAGLAQ9Y4D2 1042 aa18.22■□□□□ 0.51
PTPRB-205ENST00000547715 PUM3Q15397 648 aaKnown RBP18.21■□□□□ 0.51
PTPRB-205ENST00000547715 RABL6Q3YEC7 729 aaPredicted RBP18.21■□□□□ 0.51
PTPRB-205ENST00000547715 NCBP3Q53F19 620 aaKnown RBP18.21■□□□□ 0.51
PTPRB-205ENST00000547715 GADL1Q6ZQY3 521 aa18.21■□□□□ 0.51
PTPRB-205ENST00000547715 FASTKD5Q7L8L6 764 aaKnown RBP18.21■□□□□ 0.51
PTPRB-205ENST00000547715 WDR63Q8IWG1 891 aa18.21■□□□□ 0.51
PTPRB-205ENST00000547715 PXYLP1Q8TE99 480 aa18.21■□□□□ 0.51
PTPRB-205ENST00000547715 PAWRQ96IZ0 340 aaKnown RBP18.21■□□□□ 0.51
PTPRB-205ENST00000547715 SPINK5Q9NQ38 1064 aaPredicted RBP18.21■□□□□ 0.51
PTPRB-205ENST00000547715 ZHX2Q9Y6X8 837 aa18.21■□□□□ 0.51
PTPRB-205ENST00000547715 SMCR8Q8TEV9 937 aaPredicted RBP18.2■□□□□ 0.5
PTPRB-205ENST00000547715 PAK6Q9NQU5 681 aaPredicted RBP18.2■□□□□ 0.5
PTPRB-205ENST00000547715 PICK1Q9NRD5 415 aa18.2■□□□□ 0.5
PTPRB-205ENST00000547715 FAM198AQ9UFP1 575 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms