RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 CAPNS2Q96L46 248 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 LRRCC1Q9C099 1032 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 ZNF408Q9H9D4 720 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 ABCF2Q9UG63 623 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 ATRNL1Q5VV63 1379 aa13.39□□□□□ -0.27
GCN1-202ENST00000547263 SLC10A3P09131 477 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 MAP2K2P36507 400 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 HUNKP57058 714 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 PPP4CP60510 307 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 NBPF12Q5TAG4 269 aaPredicted RBP13.38□□□□□ -0.27
GCN1-202ENST00000547263 CYP4F22Q6NT55 531 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 RGMBQ6NW40 437 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 CDAN1Q8IWY9 1227 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 FAM151AQ8WW52 585 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 VEZTQ9HBM0 779 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 PIH1D3Q9NQM4 214 aaKnown RBP13.38□□□□□ -0.27
GCN1-202ENST00000547263 FAM198AQ9UFP1 575 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 SUPT16HQ9Y5B9 1047 aaKnown RBP13.38□□□□□ -0.27
GCN1-202ENST00000547263 SALL3Q9BXA9 1300 aa13.38□□□□□ -0.27
GCN1-202ENST00000547263 MYH7P12883 1935 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 WDHD1O75717 1129 aaPredicted RBP13.37□□□□□ -0.27
GCN1-202ENST00000547263 ATP5JP18859 108 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 NF2P35240 595 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 TNNI2P48788 182 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 MAP3K10Q02779 954 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 NFIAQ12857 509 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 SUPT20HL1Q3ZLR7 823 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 MOB2Q70IA6 237 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 DZIP1Q86YF9 867 aaKnown RBP13.37□□□□□ -0.27
GCN1-202ENST00000547263 TMEM39BQ9GZU3 492 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 SNRKQ9NRH2 765 aa13.37□□□□□ -0.27
GCN1-202ENST00000547263 SIPA1L1O43166 1804 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 DDX60LQ5H9U9 1706 aaKnown RBP13.36□□□□□ -0.27
GCN1-202ENST00000547263 TCP10L2B9ZVM9 353 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 ENTPD3O75355 529 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 USP2O75604 605 aaPredicted RBP13.36□□□□□ -0.27
GCN1-202ENST00000547263 LDHCP07864 332 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 IFIT2P09913 472 aaKnown RBP13.36□□□□□ -0.27
GCN1-202ENST00000547263 BTDP43251 543 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 CACNB3P54284 484 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 GSTO1P78417 241 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 RASAL3Q86YV0 1011 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 SMC5Q8IY18 1101 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 CCDC102AQ96A19 550 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 ANTXR1Q9H6X2 564 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 WBP1LQ9NX94 342 aa13.36□□□□□ -0.27
GCN1-202ENST00000547263 NOGQ13253 232 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 ARMC9Q7Z3E5 817 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 ADGRA1Q86SQ6 560 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 EXOC6Q8TAG9 804 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 HAUS7Q99871 368 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 USP40Q9NVE5 1235 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 TMOD2Q9NZR1 351 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 LRP2BPQ9P2M1 347 aa13.35□□□□□ -0.27
GCN1-202ENST00000547263 UBE2Q2LH0YL09 131 aa13.34□□□□□ -0.27
GCN1-202ENST00000547263 SMARCA5O60264 1052 aaPredicted RBP13.34□□□□□ -0.27
GCN1-202ENST00000547263 SH3BP5LQ7L8J4 393 aa13.34□□□□□ -0.27
GCN1-202ENST00000547263 DDX55Q8NHQ9 600 aaKnown RBP eCLIP13.34□□□□□ -0.27
GCN1-202ENST00000547263 GCC1Q96CN9 775 aa13.34□□□□□ -0.27
GCN1-202ENST00000547263 DDX4Q9NQI0 724 aaKnown RBP13.34□□□□□ -0.27
GCN1-202ENST00000547263 ZNF112Q9UJU3 913 aa13.34□□□□□ -0.27
GCN1-202ENST00000547263 TCRBV5S4A2TA0A5A2 114 aa13.33□□□□□ -0.28
GCN1-202ENST00000547263 APBB1O00213 710 aa13.33□□□□□ -0.28
GCN1-202ENST00000547263 PPP1R12BO60237 982 aaPredicted RBP13.33□□□□□ -0.28
GCN1-202ENST00000547263 TTF1Q15361 905 aaPredicted RBP13.33□□□□□ -0.28
GCN1-202ENST00000547263 NAA16Q6N069 864 aaPredicted RBP13.33□□□□□ -0.28
GCN1-202ENST00000547263 ZFPM1Q8IX07 1006 aa13.33□□□□□ -0.28
GCN1-202ENST00000547263 ZIC5Q96T25 663 aa13.33□□□□□ -0.28
GCN1-202ENST00000547263 RAI14Q9P0K7 980 aa13.33□□□□□ -0.28
GCN1-202ENST00000547263 ANGEL1Q9UNK9 670 aaKnown RBP13.33□□□□□ -0.28
GCN1-202ENST00000547263 NDUFB9Q9Y6M9 179 aa13.33□□□□□ -0.28
GCN1-202ENST00000547263 AOC2O75106 756 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 HSPA1AP0DMV8 641 aaKnown RBP13.32□□□□□ -0.28
GCN1-202ENST00000547263 HSPA1BP0DMV9 641 aaKnown RBP13.32□□□□□ -0.28
GCN1-202ENST00000547263 RGS3P49796 1198 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 ZNF157P51786 506 aaPredicted RBP13.32□□□□□ -0.28
GCN1-202ENST00000547263 MAP2K1Q02750 393 aaPredicted RBP13.32□□□□□ -0.28
GCN1-202ENST00000547263 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.32□□□□□ -0.28
GCN1-202ENST00000547263 CERS3Q8IU89 383 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 ANKRD13AQ8IZ07 590 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 HOOK2Q96ED9 719 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 ECHDC1Q9NTX5 307 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 FZD1Q9UP38 647 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 TTC41PQ6P2S7 1318 aa13.32□□□□□ -0.28
GCN1-202ENST00000547263 IGHDP01880 384 aa13.31□□□□□ -0.28
GCN1-202ENST00000547263 MAP3K12Q12852 859 aa13.31□□□□□ -0.28
GCN1-202ENST00000547263 METTL16Q86W50 562 aaKnown RBP13.31□□□□□ -0.28
GCN1-202ENST00000547263 REM2Q8IYK8 340 aaPredicted RBP13.31□□□□□ -0.28
GCN1-202ENST00000547263 PI4K2BQ8TCG2 481 aa13.31□□□□□ -0.28
GCN1-202ENST00000547263 RIOK1Q9BRS2 568 aaKnown RBP13.31□□□□□ -0.28
GCN1-202ENST00000547263 BOLA2Q9H3K6 86 aa13.31□□□□□ -0.28
GCN1-202ENST00000547263 AK9Q5TCS8 1911 aa13.31□□□□□ -0.28
GCN1-202ENST00000547263 PHIPQ8WWQ0 1821 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 DDTLA6NHG4 134 aaPredicted RBP13.3□□□□□ -0.28
GCN1-202ENST00000547263 TBC1D12O60347 775 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 ZBTB48P10074 688 aaPredicted RBP13.3□□□□□ -0.28
GCN1-202ENST00000547263 PDE6AP16499 860 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 PLCG2P16885 1265 aa13.3□□□□□ -0.28
GCN1-202ENST00000547263 IREB2P48200 963 aaKnown RBP13.3□□□□□ -0.28
GCN1-202ENST00000547263 TM4SF4P48230 202 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms