RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 TDRD7Q8NHU6 1098 aaKnown RBP14.41□□□□□ -0.1
PTCH1-212ENST00000546744 STAT6P42226 847 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 RRS1Q15050 365 aaKnown RBP14.41□□□□□ -0.1
PTCH1-212ENST00000546744 SMARCC2Q8TAQ2 1214 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 NEURL4Q96JN8 1562 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 PPIP5K1Q6PFW1 1433 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 PHLPP2Q6ZVD8 1323 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 PIK3C2BO00750 1634 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 ATF3P18847 181 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 DNA2P51530 1060 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 SF3B2Q13435 895 aaKnown RBP14.41□□□□□ -0.1
PTCH1-212ENST00000546744 RPAINQ86UA6 219 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 LARP6Q9BRS8 491 aaKnown RBP14.41□□□□□ -0.1
PTCH1-212ENST00000546744 MTUS1Q9ULD2 1270 aa14.41□□□□□ -0.1
PTCH1-212ENST00000546744 NOL3O60936 208 aaKnown RBP14.4□□□□□ -0.1
PTCH1-212ENST00000546744 CALM1P0DP23 149 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 CALM2P0DP24 149 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 CALM3P0DP25 149 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 TERF2Q15554 542 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 ERCC6LQ2NKX8 1250 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 LRRC8AQ8IWT6 810 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 SLC26A6Q9BXS9 759 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 SETBP1Q9Y6X0 1596 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 CUTAO60888 179 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 UQCRFS1P1P0C7P4 283 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 GCKP35557 465 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 SELENOSQ9BQE4 189 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 VCX3BQ9H321 246 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 CALCOCO2Q13137 446 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 ICE2Q659A1 982 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 ISM2Q6H9L7 571 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 PHLDB2Q86SQ0 1253 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 USP37Q86T82 979 aa14.4□□□□□ -0.1
PTCH1-212ENST00000546744 SDAD1Q9NVU7 687 aaKnown RBP eCLIP14.4□□□□□ -0.1
PTCH1-212ENST00000546744 UBXN1Q04323 297 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 TNIP1Q15025 636 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 MFSD6Q6ZSS7 791 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 MICU3Q86XE3 530 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 NEK11Q8NG66 645 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 IGHMBP2P38935 993 aaKnown RBP14.39□□□□□ -0.11
PTCH1-212ENST00000546744 NUCKS1Q9H1E3 243 aaKnown RBP14.39□□□□□ -0.11
PTCH1-212ENST00000546744 FAM184BQ9ULE4 1060 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 SGSM2O43147 1006 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 BABAM1Q9NWV8 329 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 NRXN1Q9ULB1 1477 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 REREQ9P2R6 1566 aa14.39□□□□□ -0.11
PTCH1-212ENST00000546744 KIF1CO43896 1103 aaKnown RBP14.38□□□□□ -0.11
PTCH1-212ENST00000546744 RPS6KB1P23443 525 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 FERMT1Q9BQL6 677 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 LARSQ9P2J5 1176 aaKnown RBP14.38□□□□□ -0.11
PTCH1-212ENST00000546744 MTMR7Q9Y216 660 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 PLEKHG1Q9ULL1 1385 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 KIAA1210Q9ULL0 1709 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 NDC80O14777 642 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 KCNA6P17658 529 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 RTN1Q16799 776 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 KIF13AQ9H1H9 1805 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 ERCC3P19447 782 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 MAGEA9P43362 315 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 RBM6P78332 1123 aaKnown RBP14.38□□□□□ -0.11
PTCH1-212ENST00000546744 IFIT5Q13325 482 aaKnown RBP14.38□□□□□ -0.11
PTCH1-212ENST00000546744 CAPN7Q9Y6W3 813 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 ACEP12821 1306 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 STX10O60499 249 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 CIB2O75838 187 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 CTNNA2P26232 953 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 MAP7Q14244 749 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 WTAPQ15007 396 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 SPTLC3Q9NUV7 552 aa14.38□□□□□ -0.11
PTCH1-212ENST00000546744 DDX41Q9UJV9 622 aaKnown RBP14.38□□□□□ -0.11
PTCH1-212ENST00000546744 POLR1AO95602 1720 aaPredicted RBP14.38□□□□□ -0.11
PTCH1-212ENST00000546744 PPP1R14CQ8TAE6 165 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 TBC1D31Q96DN5 1066 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 PDLIM2Q96JY6 352 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 RGS12O14924 1447 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 ALKQ9UM73 1620 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 SLC5A1P13866 664 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 MCTP2Q6DN12 878 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 TRIML1Q8N9V2 468 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 CAPZA3Q96KX2 299 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 CAPS2Q9BXY5 557 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 NEBLO76041 1014 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 MYL6BP14649 208 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 IRX4P78413 519 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 MXRA7P84157 204 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 FAM135BQ49AJ0 1406 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 CFAP221Q4G0U5 840 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 ANO1Q5XXA6 986 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 C17orf53Q8N3J3 647 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-212ENST00000546744 BCAS4Q8TDM0 211 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 IFT81Q8WYA0 676 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 RAB3IPQ96QF0 476 aaPredicted RBP14.37□□□□□ -0.11
PTCH1-212ENST00000546744 WWC3Q9ULE0 1092 aa14.37□□□□□ -0.11
PTCH1-212ENST00000546744 CCDC160A6NGH7 325 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 ZKSCAN8Q15776 578 aaPredicted RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 SECISBP2LQ93073 1101 aaKnown RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 HAUS4Q9H6D7 363 aa14.36□□□□□ -0.11
PTCH1-212ENST00000546744 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
PTCH1-212ENST00000546744 FERP16591 822 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms