RNA–Protein interactions for RNA: ENST00000546279.5

LMO3-233, Transcript of LIM domain only 3, humanhuman

TSL 4

Gene LMO3, Length 590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-233ENST00000546279 PDE1AP54750 535 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 KIF23Q02241 960 aaPredicted RBP13.02□□□□□ -0.33
LMO3-233ENST00000546279 ZIC5Q96T25 663 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 GBA2Q9HCG7 927 aaPredicted RBP13.02□□□□□ -0.33
LMO3-233ENST00000546279 PIH1D3Q9NQM4 214 aaKnown RBP13.02□□□□□ -0.33
LMO3-233ENST00000546279 SNRKQ9NRH2 765 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 ECHDC1Q9NTX5 307 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 AOX1Q06278 1338 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 TTC41PQ6P2S7 1318 aa13.02□□□□□ -0.33
LMO3-233ENST00000546279 FAM155AB1AL88 458 aaPredicted RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 MX1P20591 662 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 PRDX5P30044 214 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 ZNF157P51786 506 aaPredicted RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 HIRAP54198 1017 aaPredicted RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 CHAF1AQ13111 956 aaPredicted RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 CCDC158Q5M9N0 1113 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 MFSD14BQ5SR56 506 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 TTC39AQ5SRH9 613 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 TBC1D9Q6ZT07 1266 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 USP48Q86UV5 1035 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 VPS37DQ86XT2 251 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 EDC3Q96F86 508 aaKnown RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 HAUS7Q99871 368 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 CNOT7Q9UIV1 285 aaKnown RBP13.01□□□□□ -0.33
LMO3-233ENST00000546279 PCDHAC2Q9Y5I4 1007 aa13.01□□□□□ -0.33
LMO3-233ENST00000546279 DDX60LQ5H9U9 1706 aaKnown RBP13□□□□□ -0.33
LMO3-233ENST00000546279 MYO3BQ8WXR4 1341 aa13□□□□□ -0.33
LMO3-233ENST00000546279 GORABQ5T7V8 394 aa13□□□□□ -0.33
LMO3-233ENST00000546279 WDR66Q8TBY9 1149 aa13□□□□□ -0.33
LMO3-233ENST00000546279 CCDC136Q96JN2 1154 aa13□□□□□ -0.33
LMO3-233ENST00000546279 HPS5Q9UPZ3 1129 aa13□□□□□ -0.33
LMO3-233ENST00000546279 G3V3G9 751 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 PITPNM1O00562 1244 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 DCAF8Q5TAQ9 597 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 KRT26Q7Z3Y9 468 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 MTMR14Q8NCE2 650 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 TRPM4Q8TD43 1214 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 TBC1D22AQ8WUA7 517 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 BOLA2Q9H3K6 86 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 SUGT1Q9Y2Z0 365 aa12.99□□□□□ -0.33
LMO3-233ENST00000546279 GAKO14976 1311 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 SIPA1L1O43166 1804 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 CHGBP05060 677 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 KIAA0825Q8IV33 1275 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 MICALL2Q8IY33 904 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 DCPSQ96C86 337 aaKnown RBP12.98□□□□□ -0.33
LMO3-233ENST00000546279 NSUN4Q96CB9 384 aaKnown RBP12.98□□□□□ -0.33
LMO3-233ENST00000546279 MRIQ9BWK5 157 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 HDAC9Q9UKV0 1011 aa12.98□□□□□ -0.33
LMO3-233ENST00000546279 RFX7Q2KHR2 1363 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 TCRBV5S4A2TA0A5A2 114 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 SLC10A3P09131 477 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 USP17L8P0C7I0 530 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 GSPT1P15170 499 aaKnown RBP12.97□□□□□ -0.33
LMO3-233ENST00000546279 HDLBPQ00341 1268 aaKnown RBP12.97□□□□□ -0.33
LMO3-233ENST00000546279 DIXDC1Q155Q3 683 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 SAMD7Q7Z3H4 446 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 ADGRA1Q86SQ6 560 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 FAM163AQ96GL9 167 aaPredicted RBP12.97□□□□□ -0.33
LMO3-233ENST00000546279 CSRNP1Q96S65 589 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 PAPPA2Q9BXP8 1791 aa12.97□□□□□ -0.33
LMO3-233ENST00000546279 ASTN2O75129 1339 aaPredicted RBP12.96□□□□□ -0.33
LMO3-233ENST00000546279 GOLIM4O00461 696 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 GLRX3O76003 335 aaKnown RBP12.96□□□□□ -0.33
LMO3-233ENST00000546279 PRR29P0C7W0 189 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 MMP14P50281 582 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 MECOMQ03112 1051 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 HABP4Q5JVS0 413 aaKnown RBP12.96□□□□□ -0.33
LMO3-233ENST00000546279 FBXW7Q969H0 707 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 BCL11AQ9H165 835 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 PAG1Q9NWQ8 432 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 SERPINA10Q9UK55 444 aa12.96□□□□□ -0.33
LMO3-233ENST00000546279 TTF2Q9UNY4 1162 aaKnown RBP12.96□□□□□ -0.33
LMO3-233ENST00000546279 IGSF3O75054 1194 aa12.95□□□□□ -0.34
LMO3-233ENST00000546279 FRAT2O75474 233 aaPredicted RBP12.95□□□□□ -0.34
LMO3-233ENST00000546279 LDHBP07195 334 aaKnown RBP12.95□□□□□ -0.34
LMO3-233ENST00000546279 SLFNL1Q499Z3 407 aa12.95□□□□□ -0.34
LMO3-233ENST00000546279 APOBEC3HQ6NTF7 200 aaKnown RBP12.95□□□□□ -0.34
LMO3-233ENST00000546279 HHIPL2Q6UWX4 724 aa12.95□□□□□ -0.34
LMO3-233ENST00000546279 DNAJC2Q99543 621 aaKnown RBP12.95□□□□□ -0.34
LMO3-233ENST00000546279 MYOZ2Q9NPC6 264 aa12.95□□□□□ -0.34
LMO3-233ENST00000546279 DAGLAQ9Y4D2 1042 aa12.95□□□□□ -0.34
LMO3-233ENST00000546279 MYH1P12882 1939 aa12.95□□□□□ -0.34
LMO3-233ENST00000546279 BAZ2AQ9UIF9 1905 aaKnown RBP12.95□□□□□ -0.34
LMO3-233ENST00000546279 NAV1Q8NEY1 1877 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 F8W031 263 aaPredicted RBP12.94□□□□□ -0.34
LMO3-233ENST00000546279 WNT10BO00744 389 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 CRKP46108 304 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 NBPF9Q3BBW0 867 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 CFAP100Q494V2 611 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 TBC1D10BQ4KMP7 808 aaPredicted RBP12.94□□□□□ -0.34
LMO3-233ENST00000546279 TTC22Q5TAA0 569 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 SULF1Q8IWU6 871 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 ZGPATQ8N5A5 531 aaKnown RBP12.94□□□□□ -0.34
LMO3-233ENST00000546279 KBTBD3Q8NAB2 608 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 PRMT6Q96LA8 375 aaPredicted RBP12.94□□□□□ -0.34
LMO3-233ENST00000546279 ZDHHC15Q96MV8 337 aa12.94□□□□□ -0.34
LMO3-233ENST00000546279 ABCF2Q9UG63 623 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms