RNA–Protein interactions for RNA: ENST00000545868.4

GABRB3-205, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 5 BASIC

Gene GABRB3, Length 1,267 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-205ENST00000545868 GRIK5Q16478 980 aa12.2□□□□□ -0.46
GABRB3-205ENST00000545868 NBPF12Q5TAG4 269 aaPredicted RBP12.2□□□□□ -0.46
GABRB3-205ENST00000545868 ZNF804AQ7Z570 1209 aa12.2□□□□□ -0.46
GABRB3-205ENST00000545868 CDAN1Q8IWY9 1227 aa12.2□□□□□ -0.46
GABRB3-205ENST00000545868 WNK4Q96J92 1243 aa12.2□□□□□ -0.46
GABRB3-205ENST00000545868 DOCK2Q92608 1830 aa12.2□□□□□ -0.46
GABRB3-205ENST00000545868 ZNF521Q96K83 1311 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 GRXCR2A6NFK2 248 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 GYG1P46976 350 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 CAP1Q01518 475 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 PKN2Q16513 984 aaKnown RBP12.19□□□□□ -0.46
GABRB3-205ENST00000545868 LDHAL6AQ6ZMR3 332 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 TDRD7Q8NHU6 1098 aaKnown RBP12.19□□□□□ -0.46
GABRB3-205ENST00000545868 PPP2R3BQ9Y5P8 575 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 CEP290O15078 2479 aa12.19□□□□□ -0.46
GABRB3-205ENST00000545868 DOCK3Q8IZD9 2030 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 TBC1D12O60347 775 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 EVI5O60447 810 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 FKTNO75072 461 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 USP2O75604 605 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-205ENST00000545868 ALDH1L1O75891 902 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 CCDC57Q2TAC2 916 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 FBXO46Q6PJ61 603 aaPredicted RBP12.18□□□□□ -0.46
GABRB3-205ENST00000545868 TEPSINQ96N21 525 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 VEZTQ9HBM0 779 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 PHIPQ8WWQ0 1821 aa12.18□□□□□ -0.46
GABRB3-205ENST00000545868 UTYO14607 1347 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 MANSC4A6NHS7 340 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-205ENST00000545868 NBPF7P0C2Y1 421 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-205ENST00000545868 ZBTB48P10074 688 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-205ENST00000545868 UBE4AQ14139 1066 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 RASA3Q14644 834 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 MFSD14BQ5SR56 506 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 SLC4A10Q6U841 1118 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 ANKRD44Q8N8A2 993 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 SLC10A4Q96EP9 437 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 FAM84BQ96KN1 310 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-205ENST00000545868 PTPN18Q99952 460 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 CNNM1Q9NRU3 951 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 ZNF70Q9UC06 446 aaPredicted RBP12.17□□□□□ -0.46
GABRB3-205ENST00000545868 RIPOR2Q9Y4F9 1068 aa12.17□□□□□ -0.46
GABRB3-205ENST00000545868 OSBPP22059 807 aa12.16□□□□□ -0.46
GABRB3-205ENST00000545868 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
GABRB3-205ENST00000545868 TAF7LQ5H9L4 462 aa12.16□□□□□ -0.46
GABRB3-205ENST00000545868 VGLL2Q8N8G2 317 aa12.16□□□□□ -0.46
GABRB3-205ENST00000545868 SRCIN1Q9C0H9 1055 aa12.16□□□□□ -0.46
GABRB3-205ENST00000545868 BICC1Q9H694 974 aaKnown RBP12.16□□□□□ -0.46
GABRB3-205ENST00000545868 TDRD3Q9H7E2 651 aaKnown RBP12.16□□□□□ -0.46
GABRB3-205ENST00000545868 C9orf78Q9NZ63 289 aaPredicted RBP12.16□□□□□ -0.46
GABRB3-205ENST00000545868 TTF2Q9UNY4 1162 aaKnown RBP12.16□□□□□ -0.46
GABRB3-205ENST00000545868 MYO5AQ9Y4I1 1855 aaKnown RBP12.16□□□□□ -0.46
GABRB3-205ENST00000545868 ATAD5Q96QE3 1844 aa12.16□□□□□ -0.46
GABRB3-205ENST00000545868 CDK5RAP2Q96SN8 1893 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 GPR37O15354 613 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 ANP32CO43423 234 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 MYO1BO43795 1136 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 PPP1R12BO60237 982 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-205ENST00000545868 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
GABRB3-205ENST00000545868 CRHR2Q13324 411 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 RABL6Q3YEC7 729 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-205ENST00000545868 OTOP1Q7RTM1 612 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 DZIP1LQ8IYY4 767 aaKnown RBP12.15□□□□□ -0.46
GABRB3-205ENST00000545868 SERPINA10Q9UK55 444 aa12.15□□□□□ -0.46
GABRB3-205ENST00000545868 IQSEC3Q9UPP2 1182 aaPredicted RBP12.15□□□□□ -0.46
GABRB3-205ENST00000545868 UNCXA6NJT0 531 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 ALDH1A1P00352 501 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 HIBADHP31937 336 aaKnown RBP12.14□□□□□ -0.47
GABRB3-205ENST00000545868 CRKP46108 304 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 IREB2P48200 963 aaKnown RBP12.14□□□□□ -0.47
GABRB3-205ENST00000545868 SUPT20HL1Q3ZLR7 823 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.14□□□□□ -0.47
GABRB3-205ENST00000545868 FBXO33Q7Z6M2 555 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 FAM9BQ8IZU0 186 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 MRPL50Q8N5N7 158 aaKnown RBP12.14□□□□□ -0.47
GABRB3-205ENST00000545868 KLHDC4Q8TBB5 520 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 DDX12PQ92771 950 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 TMEM39BQ9GZU3 492 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 ELP3Q9H9T3 547 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 TRIM17Q9Y577 477 aa12.14□□□□□ -0.47
GABRB3-205ENST00000545868 TCP10L2B9ZVM9 353 aa12.13□□□□□ -0.47
GABRB3-205ENST00000545868 INHBEP58166 350 aa12.13□□□□□ -0.47
GABRB3-205ENST00000545868 PRPF38BQ5VTL8 546 aaKnown RBP12.13□□□□□ -0.47
GABRB3-205ENST00000545868 ANKRD13AQ8IZ07 590 aa12.13□□□□□ -0.47
GABRB3-205ENST00000545868 CD99L2Q8TCZ2 262 aa12.13□□□□□ -0.47
GABRB3-205ENST00000545868 OPTNQ96CV9 577 aa12.13□□□□□ -0.47
GABRB3-205ENST00000545868 MROH5Q6ZUA9 1318 aa12.12□□□□□ -0.47
GABRB3-205ENST00000545868 DOCK1Q14185 1865 aa12.12□□□□□ -0.47
GABRB3-205ENST00000545868 POTEB2H3BUK9 544 aa12.12□□□□□ -0.47
GABRB3-205ENST00000545868 CACNB3P54284 484 aa12.12□□□□□ -0.47
GABRB3-205ENST00000545868 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.12□□□□□ -0.47
GABRB3-205ENST00000545868 BRI3BPQ8WY22 251 aa12.12□□□□□ -0.47
GABRB3-205ENST00000545868 ZNF316A6NFI3 1004 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-205ENST00000545868 CHAF1AQ13111 956 aaPredicted RBP12.11□□□□□ -0.47
GABRB3-205ENST00000545868 TNFAIP1Q13829 316 aa12.11□□□□□ -0.47
GABRB3-205ENST00000545868 VGLL4Q14135 290 aa12.11□□□□□ -0.47
GABRB3-205ENST00000545868 SZT2Q5T011 3432 aa12.11□□□□□ -0.47
GABRB3-205ENST00000545868 PDE8BO95263 885 aa12.1□□□□□ -0.47
GABRB3-205ENST00000545868 FGFR2P21802 821 aa12.1□□□□□ -0.47
GABRB3-205ENST00000545868 RFX5P48382 616 aaPredicted RBP12.1□□□□□ -0.47
GABRB3-205ENST00000545868 BCAMP50895 628 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms