RNA–Protein interactions for RNA: ENST00000545807.6

NECAP1-208, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 3,113 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-208ENST00000545807 CDC37Q16543 378 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 CPLX2Q6PUV4 134 aaKnown RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 GBP6Q6ZN66 633 aa7.7□□□□□ -1.18
NECAP1-208ENST00000545807 SEPT12Q8IYM1 358 aa7.7□□□□□ -1.18
NECAP1-208ENST00000545807 PRPF38AQ8NAV1 312 aaKnown RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 MICAL1Q8TDZ2 1067 aa7.7□□□□□ -1.18
NECAP1-208ENST00000545807 PALLDQ8WX93 1383 aa7.7□□□□□ -1.18
NECAP1-208ENST00000545807 KAT2BQ92831 832 aa7.7□□□□□ -1.18
NECAP1-208ENST00000545807 FAM163AQ96GL9 167 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 C16orf45Q96MC5 204 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 TMX4Q9H1E5 349 aaPredicted RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 PARP4Q9UKK3 1724 aaKnown RBP7.7□□□□□ -1.18
NECAP1-208ENST00000545807 PKD1L3Q7Z443 1732 aa7.7□□□□□ -1.18
NECAP1-208ENST00000545807 SNAP23O00161 211 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 NPHP1O15259 732 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 OAS2P29728 719 aaKnown RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 ALDH1B1P30837 517 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 DDR1Q08345 913 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 SYAP1Q96A49 352 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 GJD4Q96KN9 370 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 LARP6Q9BRS8 491 aaKnown RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 CDCA7Q9BWT1 371 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 SNRKQ9NRH2 765 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 CCDC87Q9NVE4 849 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 SUN2Q9UH99 717 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 SIPA1L3O60292 1781 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 BCL9LQ86UU0 1499 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 DISP2A7MBM2 1401 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 SLU7O95391 586 aaKnown RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 PRPHP41219 470 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 PTPN12Q05209 780 aaKnown RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 FOXD4L6Q3SYB3 417 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 FOXD4L3Q6VB84 417 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 NFXL1Q6ZNB6 911 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 ACRBPQ8NEB7 543 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 IL25Q9H293 177 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 THRAP3Q9Y2W1 955 aaKnown RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 EME2A4GXA9 379 aaPredicted RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 RAB11FIP3O75154 756 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 CCDC57Q2TAC2 916 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 DBNDD2Q9BQY9 259 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 LZTS2Q9BRK4 669 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 PDRG1Q9NUG6 133 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 SRP68Q9UHB9 627 aaKnown RBP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 NIP7Q9Y221 180 aaKnown RBP eCLIP7.69□□□□□ -1.18
NECAP1-208ENST00000545807 LRP6O75581 1613 aa7.69□□□□□ -1.18
NECAP1-208ENST00000545807 ELP1O95163 1332 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 MAP3K15Q6ZN16 1313 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 AP1G2O75843 785 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 PECAM1P16284 738 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 EIF5P55010 431 aaKnown RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 FOXO4P98177 505 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 RASA3Q14644 834 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 CEP135Q66GS9 1140 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 SPTY2D1Q68D10 685 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 INTS5Q6P9B9 1019 aaKnown RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 RPUSD2Q8IZ73 545 aaKnown RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 FAM177A1Q8N128 213 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 ADAM21Q9UKJ8 722 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 KCPQ6ZWJ8 1503 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 TNS2Q63HR2 1409 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 H7C1W4 665 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 IRS4O14654 1257 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 GNPATO15228 680 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 TRIM37O94972 964 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 GORABQ5T7V8 394 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 GIGYF2Q6Y7W6 1299 aaKnown RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 BARGINQ6ZT62 677 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 LINC00116Q8NCU8 138 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 CTCFLQ8NI51 663 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 IRX2Q9BZI1 471 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 CCNL1Q9UK58 526 aaPredicted RBP7.68□□□□□ -1.18
NECAP1-208ENST00000545807 TOGARAM1Q9Y4F4 1720 aa7.68□□□□□ -1.18
NECAP1-208ENST00000545807 CDKL5O76039 1030 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 LMAN1P49257 510 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 PREPLQ4J6C6 727 aaPredicted RBP7.67□□□□□ -1.18
NECAP1-208ENST00000545807 NYAP1Q6ZVC0 841 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 NLRP10Q86W26 655 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 FNBP4Q8N3X1 1017 aaPredicted RBP7.67□□□□□ -1.18
NECAP1-208ENST00000545807 FAM107BQ9H098 131 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 GREM2Q9H772 168 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 ECHDC1Q9NTX5 307 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.67□□□□□ -1.18
NECAP1-208ENST00000545807 MRC1P22897 1456 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 ABCC6O95255 1503 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 PLCH1Q4KWH8 1693 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 RAB27AP51159 221 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 SCRN1Q12765 414 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 SUSD4Q5VX71 490 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 AMIGO3Q86WK7 504 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 MICALL1Q8N3F8 863 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 PLEKHG4BQ96PX9 1271 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 L2HGDHQ9H9P8 463 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 GOPCQ9HD26 462 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 LMCD1Q9NZU5 365 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 CLIP2Q9UDT6 1046 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 ZDHHC9Q9Y397 364 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 SLIT2O94813 1529 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 ITGB4P16144 1822 aa7.67□□□□□ -1.18
NECAP1-208ENST00000545807 CCDC171Q6TFL3 1326 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms