RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 DDX55Q8NHQ9 600 aaKnown RBP eCLIP24.58■■□□□ 1.53
CHD4-213ENST00000545584 VGLL4Q14135 290 aa24.57■■□□□ 1.52
CHD4-213ENST00000545584 GORABQ5T7V8 394 aa24.57■■□□□ 1.52
CHD4-213ENST00000545584 PDS5AQ29RF7 1337 aaKnown RBP24.57■■□□□ 1.52
CHD4-213ENST00000545584 ZBED9Q6R2W3 1325 aa24.57■■□□□ 1.52
CHD4-213ENST00000545584 OTOFQ9HC10 1997 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 RPAP1Q9BWH6 1393 aaPredicted RBP24.56■■□□□ 1.52
CHD4-213ENST00000545584 PNMA6EA0A0J9YXQ4 647 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 IGF2BP3O00425 579 aaKnown RBP eCLIP24.56■■□□□ 1.52
CHD4-213ENST00000545584 RASGRF1Q13972 1273 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 SPTY2D1Q68D10 685 aaPredicted RBP24.56■■□□□ 1.52
CHD4-213ENST00000545584 CDC42EP5Q6NZY7 148 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 DZIP1Q86YF9 867 aaKnown RBP24.56■■□□□ 1.52
CHD4-213ENST00000545584 SLF2Q8IX21 1173 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 FAM151AQ8WW52 585 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 ABCF2Q9UG63 623 aa24.56■■□□□ 1.52
CHD4-213ENST00000545584 WRNIP1Q96S55 665 aa24.55■■□□□ 1.52
CHD4-213ENST00000545584 USP40Q9NVE5 1235 aa24.55■■□□□ 1.52
CHD4-213ENST00000545584 GTF2A2P52657 109 aa24.54■■□□□ 1.52
CHD4-213ENST00000545584 TCP10Q12799 353 aa24.54■■□□□ 1.52
CHD4-213ENST00000545584 ITPRIPQ8IWB1 547 aa24.54■■□□□ 1.52
CHD4-213ENST00000545584 ZNF341Q9BYN7 854 aa24.54■■□□□ 1.52
CHD4-213ENST00000545584 R3HDMLQ9H3Y0 253 aa24.54■■□□□ 1.52
CHD4-213ENST00000545584 LAMB1P07942 1786 aa24.53■■□□□ 1.52
CHD4-213ENST00000545584 TESPA1A2RU30 521 aaPredicted RBP24.53■■□□□ 1.52
CHD4-213ENST00000545584 OTUD5Q96G74 571 aa24.53■■□□□ 1.52
CHD4-213ENST00000545584 OS9Q13438 667 aaPredicted RBP24.52■■□□□ 1.52
CHD4-213ENST00000545584 MIGA2Q7L4E1 593 aa24.52■■□□□ 1.52
CHD4-213ENST00000545584 CNKSR2Q8WXI2 1034 aa24.52■■□□□ 1.52
CHD4-213ENST00000545584 SPDYE5A6NIY4 337 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 RGS19P49795 217 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 ATP8B2P98198 1209 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 MLLT1Q03111 559 aaPredicted RBP24.51■■□□□ 1.51
CHD4-213ENST00000545584 NFIAQ12857 509 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 ERICH6Q7L0X2 663 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 ERO1BQ86YB8 467 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 MS4A4AQ96JQ5 239 aa24.51■■□□□ 1.51
CHD4-213ENST00000545584 CCL15-CCL14A0A0B4J2E2 113 aa24.5■■□□□ 1.51
CHD4-213ENST00000545584 CCL15Q16663 113 aa24.5■■□□□ 1.51
CHD4-213ENST00000545584 ZKSCAN4Q969J2 545 aaPredicted RBP24.5■■□□□ 1.51
CHD4-213ENST00000545584 PTPN18Q99952 460 aa24.5■■□□□ 1.51
CHD4-213ENST00000545584 SNCAIPQ9Y6H5 919 aa24.5■■□□□ 1.51
CHD4-213ENST00000545584 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.5■■□□□ 1.51
CHD4-213ENST00000545584 AK9Q5TCS8 1911 aa24.5■■□□□ 1.51
CHD4-213ENST00000545584 GAKO14976 1311 aa24.5■■□□□ 1.51
CHD4-213ENST00000545584 MYH2Q9UKX2 1941 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 UQCRFS1P1P0C7P4 283 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 CRHR2Q13324 411 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 POLA2Q14181 598 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 FBXO46Q6PJ61 603 aaPredicted RBP24.49■■□□□ 1.51
CHD4-213ENST00000545584 SPATA5Q8NB90 893 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 SSH3Q8TE77 659 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 FAM163AQ96GL9 167 aaPredicted RBP24.49■■□□□ 1.51
CHD4-213ENST00000545584 FAM198AQ9UFP1 575 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 HPS5Q9UPZ3 1129 aa24.49■■□□□ 1.51
CHD4-213ENST00000545584 WDHD1O75717 1129 aaPredicted RBP24.48■■□□□ 1.51
CHD4-213ENST00000545584 BRI3BPQ8WY22 251 aa24.48■■□□□ 1.51
CHD4-213ENST00000545584 ERO1AQ96HE7 468 aa24.48■■□□□ 1.51
CHD4-213ENST00000545584 C1orf115Q9H7X2 142 aa24.48■■□□□ 1.51
CHD4-213ENST00000545584 HMG20BQ9P0W2 317 aa24.48■■□□□ 1.51
CHD4-213ENST00000545584 ZBTB7BO15156 539 aaPredicted RBP24.47■■□□□ 1.51
CHD4-213ENST00000545584 ENTPD3O75355 529 aa24.47■■□□□ 1.51
CHD4-213ENST00000545584 SURF6O75683 361 aaKnown RBP24.47■■□□□ 1.51
CHD4-213ENST00000545584 CETPP11597 493 aa24.47■■□□□ 1.51
CHD4-213ENST00000545584 RLBP1P12271 317 aa24.47■■□□□ 1.51
CHD4-213ENST00000545584 ARID4AP29374 1257 aaPredicted RBP24.47■■□□□ 1.51
CHD4-213ENST00000545584 GSTO1P78417 241 aa24.47■■□□□ 1.51
CHD4-213ENST00000545584 IDI2Q9BXS1 227 aa24.47■■□□□ 1.51
CHD4-213ENST00000545584 GPR108Q9NPR9 543 aa24.47■■□□□ 1.51
CHD4-213ENST00000545584 MROH7-TTC4A0A0A0MT08 1334 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 LDHCP07864 332 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 BTDP43251 543 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 RGS3P49796 1198 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 MECOMQ03112 1051 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 PPIL2Q13356 520 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 SNAPC2Q13487 334 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 TAF1CQ15572 869 aaPredicted RBP24.46■■□□□ 1.51
CHD4-213ENST00000545584 ZSCAN29Q8IWY8 852 aaPredicted RBP24.46■■□□□ 1.51
CHD4-213ENST00000545584 ZFYVE28Q9HCC9 887 aa24.46■■□□□ 1.51
CHD4-213ENST00000545584 MS4A1P11836 297 aa24.45■■□□□ 1.5
CHD4-213ENST00000545584 INPP5BP32019 993 aa24.45■■□□□ 1.5
CHD4-213ENST00000545584 PPATQ06203 517 aa24.45■■□□□ 1.5
CHD4-213ENST00000545584 CCDC158Q5M9N0 1113 aa24.45■■□□□ 1.5
CHD4-213ENST00000545584 ZNF112Q9UJU3 913 aa24.45■■□□□ 1.5
CHD4-213ENST00000545584 TRIM17Q9Y577 477 aa24.45■■□□□ 1.5
CHD4-213ENST00000545584 IRF6O14896 467 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 SOX10P56693 466 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 SP3Q02447 781 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 TNNI3KQ59H18 835 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 TTC39AQ5SRH9 613 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 RAI14Q9P0K7 980 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 FPGT-TNNI3KV9GXZ4 949 aa24.44■■□□□ 1.5
CHD4-213ENST00000545584 GPR75-ASB3A0A0A6YYF3 556 aa24.43■■□□□ 1.5
CHD4-213ENST00000545584 PI16Q6UXB8 463 aa24.43■■□□□ 1.5
CHD4-213ENST00000545584 TBC1D9Q6ZT07 1266 aa24.43■■□□□ 1.5
CHD4-213ENST00000545584 ZFPM1Q8IX07 1006 aa24.43■■□□□ 1.5
CHD4-213ENST00000545584 LRP2BPQ9P2M1 347 aa24.43■■□□□ 1.5
CHD4-213ENST00000545584 MCAMP43121 646 aa24.42■■□□□ 1.5
CHD4-213ENST00000545584 PICALMQ13492 652 aa24.42■■□□□ 1.5
CHD4-213ENST00000545584 FAM43AQ8N2R8 423 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms