RNA–Protein interactions for RNA: ENST00000545209.1

SPPL3-209, Transcript of signal peptide peptidase like 3, humanhuman

TSL 1 (best)

Gene SPPL3, Length 797 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPPL3-209ENST00000545209 GTF2E1P29083 439 aaPredicted RBP8.43□□□□□ -1.06
SPPL3-209ENST00000545209 IGHMBP2P38935 993 aaKnown RBP8.43□□□□□ -1.06
SPPL3-209ENST00000545209 PRPF38BQ5VTL8 546 aaKnown RBP8.43□□□□□ -1.06
SPPL3-209ENST00000545209 FAM227BQ96M60 508 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 CDC5LQ99459 802 aaKnown RBP8.43□□□□□ -1.06
SPPL3-209ENST00000545209 MPHOSPH8Q99549 860 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 NYXQ9GZU5 481 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 IL25Q9H293 177 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 CWC22Q9HCG8 908 aaKnown RBP8.43□□□□□ -1.06
SPPL3-209ENST00000545209 PALD1Q9ULE6 856 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 RIPOR2Q9Y4F9 1068 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 MED23Q9ULK4 1368 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 RIC1Q4ADV7 1423 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 LRP5O75197 1615 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 SPEF2Q9C093 1822 aa8.43□□□□□ -1.06
SPPL3-209ENST00000545209 A0A0D9SFI3 127 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 ZFYP08048 801 aaPredicted RBP8.42□□□□□ -1.06
SPPL3-209ENST00000545209 SLC5A1P13866 664 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
SPPL3-209ENST00000545209 PUM3Q15397 648 aaKnown RBP8.42□□□□□ -1.06
SPPL3-209ENST00000545209 CSPP1Q1MSJ5 1256 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 SPRYD7Q5W111 196 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 FAM196AQ6ZSG2 479 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 DDX46Q7L014 1031 aaKnown RBP8.42□□□□□ -1.06
SPPL3-209ENST00000545209 PRR7Q8TB68 274 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 EDC3Q96F86 508 aaKnown RBP8.42□□□□□ -1.06
SPPL3-209ENST00000545209 XAGE2Q96GT9 111 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 HMG20BQ9P0W2 317 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 NARFQ9UHQ1 456 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 RBM8AQ9Y5S9 174 aaKnown RBP8.42□□□□□ -1.06
SPPL3-209ENST00000545209 SNX14Q9Y5W7 946 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 SCN7AQ01118 1682 aa8.42□□□□□ -1.06
SPPL3-209ENST00000545209 LAMB2P55268 1798 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 PDE8BO95263 885 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 UQCRFS1P1P0C7P4 283 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 PSMA5P28066 241 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 ADORA1P30542 326 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 DDIT3P35638 169 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 KCNQ4P56696 695 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 PTH1RQ03431 593 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 KRT32Q14532 448 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
SPPL3-209ENST00000545209 MCMDC2Q4G0Z9 681 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 SH3D19Q5HYK7 790 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 FAM182BQ5T319 152 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 PRPF40BQ6NWY9 871 aaKnown RBP8.41□□□□□ -1.06
SPPL3-209ENST00000545209 PTF1AQ7RTS3 328 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 LPIN2Q92539 896 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 MAP4K1Q92918 833 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 KCNB2Q92953 911 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 ZNF512BQ96KM6 892 aaPredicted RBP8.41□□□□□ -1.06
SPPL3-209ENST00000545209 GBP4Q96PP9 640 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 UPF3BQ9BZI7 483 aaKnown RBP8.41□□□□□ -1.06
SPPL3-209ENST00000545209 TM6SF1Q9BZW5 370 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.41□□□□□ -1.06
SPPL3-209ENST00000545209 HELLSQ9NRZ9 838 aa8.41□□□□□ -1.06
SPPL3-209ENST00000545209 RNF113AO15541 343 aaKnown RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 LILRB3O75022 631 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 FRAT2O75474 233 aaPredicted RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 CASTP20810 708 aaKnown RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 PTMSP20962 102 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 SSFA2P28290 1259 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 RFC4P35249 363 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 RPIAP49247 311 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 NUCB2P80303 420 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 FKBP4Q02790 459 aaKnown RBP eCLIP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 TTF1Q15361 905 aaPredicted RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 QPCTQ16769 361 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 USPL1Q5W0Q7 1092 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 CREB3L3Q68CJ9 461 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 ZNF772Q68DY9 489 aaPredicted RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 ZSCAN25Q6NSZ9 544 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 BICDL1Q6ZP65 573 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 KRT27Q7Z3Y8 459 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 NBPF5PQ86XG9 351 aaPredicted RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 VGLL2Q8N8G2 317 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 TMX3Q96JJ7 454 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 JAKMIP1Q96N16 626 aaKnown RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 IRX2Q9BZI1 471 aaPredicted RBP8.4□□□□□ -1.06
SPPL3-209ENST00000545209 CYP46A1Q9Y6A2 500 aa8.4□□□□□ -1.06
SPPL3-209ENST00000545209 LY75O60449 1722 aa8.4□□□□□ -1.07
SPPL3-209ENST00000545209 SLC27A2O14975 620 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 NPHP1O15259 732 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 ZBTB24O43167 697 aaPredicted RBP8.39□□□□□ -1.07
SPPL3-209ENST00000545209 TAF5LO75529 589 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 RAB3GAP1Q15042 981 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 NECTIN1Q15223 517 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 SF3B3Q15393 1217 aaKnown RBP8.39□□□□□ -1.07
SPPL3-209ENST00000545209 ERFEQ4G0M1 354 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 SLC27A3Q5K4L6 730 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 SLC10A5Q5PT55 438 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 ZMYM1Q5SVZ6 1142 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 TRAPPC3LQ5T215 181 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 VPS53Q5VIR6 699 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 TBC1D9BQ66K14 1250 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 DESI1Q6ICB0 168 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 TPTE2Q6XPS3 522 aa8.39□□□□□ -1.07
SPPL3-209ENST00000545209 ZNF598Q86UK7 904 aaKnown RBP8.39□□□□□ -1.07
SPPL3-209ENST00000545209 ZNF589Q86UQ0 364 aaPredicted RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms