RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 LDHCP07864 332 aa14.49□□□□□ -0.09
HDAC4-216ENST00000544989 KIF23Q02241 960 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-216ENST00000544989 NBPF12Q5TAG4 269 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-216ENST00000544989 SLC10A4Q96EP9 437 aa14.49□□□□□ -0.09
HDAC4-216ENST00000544989 FAM163AQ96GL9 167 aaPredicted RBP14.49□□□□□ -0.09
HDAC4-216ENST00000544989 AOX1Q06278 1338 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 SREBF2Q12772 1141 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 PRKG1Q13976 671 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 DCAF15Q66K64 600 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 MOB2Q70IA6 237 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 ANKRD13AQ8IZ07 590 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 HMG20BQ9P0W2 317 aa14.48□□□□□ -0.09
HDAC4-216ENST00000544989 GAKO14976 1311 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 RAB11FIP3O75154 756 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 ZBTB48P10074 688 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-216ENST00000544989 INHBEP58166 350 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 DIXDC1Q155Q3 683 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 TMED8Q6PL24 325 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-216ENST00000544989 FAM151AQ8WW52 585 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 KIF1BPQ96EK5 621 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 TEPSINQ96N21 525 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 TMEM39BQ9GZU3 492 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.47□□□□□ -0.09
HDAC4-216ENST00000544989 CASP8AP2Q9UKL3 1982 aa14.47□□□□□ -0.09
HDAC4-216ENST00000544989 USP2O75604 605 aaPredicted RBP14.46□□□□□ -0.09
HDAC4-216ENST00000544989 MCAMP43121 646 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 CDC42EP5Q6NZY7 148 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 CLASRPQ8N2M8 674 aaKnown RBP14.46□□□□□ -0.09
HDAC4-216ENST00000544989 CSRNP1Q96S65 589 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 DBNDD2Q9BQY9 259 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 USP40Q9NVE5 1235 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 LRP2BPQ9P2M1 347 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 EXOC6BQ9Y2D4 811 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 SSC5DA1L4H1 1573 aa14.46□□□□□ -0.09
HDAC4-216ENST00000544989 MROH7-TTC4A0A0A0MT08 1334 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 MANSC4A6NHS7 340 aaPredicted RBP14.45□□□□□ -0.1
HDAC4-216ENST00000544989 TM4SF4P48230 202 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 MECOMQ03112 1051 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 SPRYD7Q5W111 196 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 RHPN1Q8TCX5 695 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 ZIC5Q96T25 663 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 NOL10Q9BSC4 688 aaKnown RBP14.45□□□□□ -0.1
HDAC4-216ENST00000544989 IDI2Q9BXS1 227 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 RAI14Q9P0K7 980 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 CSADQ9Y600 493 aa14.45□□□□□ -0.1
HDAC4-216ENST00000544989 GPR75-ASB3A0A0A6YYF3 556 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 CCDC85CA6NKD9 419 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 ENTPD3O75355 529 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 NPM3O75607 178 aaKnown RBP14.44□□□□□ -0.1
HDAC4-216ENST00000544989 ALDH1A1P00352 501 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 PLCG2P16885 1265 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 CACNB3P54284 484 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 MAP3K9P80192 1104 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 AACSQ86V21 672 aa14.44□□□□□ -0.1
HDAC4-216ENST00000544989 NSUN4Q96CB9 384 aaKnown RBP14.44□□□□□ -0.1
HDAC4-216ENST00000544989 EAF2Q96CJ1 260 aaPredicted RBP14.44□□□□□ -0.1
HDAC4-216ENST00000544989 DBNLQ9UJU6 430 aaKnown RBP14.44□□□□□ -0.1
HDAC4-216ENST00000544989 MYH2Q9UKX2 1941 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 BAG3O95817 575 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 BTDP43251 543 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 C20orf194Q5TEA3 1177 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 OTUD7BQ6GQQ9 843 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 CERS3Q8IU89 383 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.43□□□□□ -0.1
HDAC4-216ENST00000544989 WNK4Q96J92 1243 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 ZNF341Q9BYN7 854 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 CCDC8Q9H0W5 538 aaPredicted RBP14.43□□□□□ -0.1
HDAC4-216ENST00000544989 RNF186Q9NXI6 227 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 AKAP11Q9UKA4 1901 aa14.43□□□□□ -0.1
HDAC4-216ENST00000544989 TRPA1O75762 1119 aa14.42□□□□□ -0.1
HDAC4-216ENST00000544989 IFIT2P09913 472 aaKnown RBP14.42□□□□□ -0.1
HDAC4-216ENST00000544989 NAA16Q6N069 864 aaPredicted RBP14.42□□□□□ -0.1
HDAC4-216ENST00000544989 PI16Q6UXB8 463 aa14.42□□□□□ -0.1
HDAC4-216ENST00000544989 SIRT2Q8IXJ6 389 aa14.42□□□□□ -0.1
HDAC4-216ENST00000544989 RRP1P56182 461 aaKnown RBP14.41□□□□□ -0.1
HDAC4-216ENST00000544989 TCP10Q12799 353 aa14.41□□□□□ -0.1
HDAC4-216ENST00000544989 TTF1Q15361 905 aaPredicted RBP14.41□□□□□ -0.1
HDAC4-216ENST00000544989 NOM1Q5C9Z4 860 aaKnown RBP14.41□□□□□ -0.1
HDAC4-216ENST00000544989 TBC1D9Q6ZT07 1266 aa14.41□□□□□ -0.1
HDAC4-216ENST00000544989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.41□□□□□ -0.1
HDAC4-216ENST00000544989 CLMNQ96JQ2 1002 aa14.41□□□□□ -0.1
HDAC4-216ENST00000544989 YTHDC1Q96MU7 727 aaKnown RBP14.41□□□□□ -0.1
HDAC4-216ENST00000544989 WRNIP1Q96S55 665 aa14.41□□□□□ -0.1
HDAC4-216ENST00000544989 FAM198AQ9UFP1 575 aa14.41□□□□□ -0.1
HDAC4-216ENST00000544989 FZD1Q9UP38 647 aa14.41□□□□□ -0.1
HDAC4-216ENST00000544989 CYP2E1P05181 493 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-216ENST00000544989 RGS3P49796 1198 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 GTF2A2P52657 109 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 NFIAQ12857 509 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 MKRN3Q13064 507 aaKnown RBP14.4□□□□□ -0.1
HDAC4-216ENST00000544989 VGLL4Q14135 290 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.4□□□□□ -0.1
HDAC4-216ENST00000544989 CDAN1Q8IWY9 1227 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 CFHR5Q9BXR6 569 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 MCOLN1Q9GZU1 580 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 IL1RAPL2Q9NP60 686 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 SNRKQ9NRH2 765 aa14.4□□□□□ -0.1
HDAC4-216ENST00000544989 TLR7Q9NYK1 1049 aaKnown RBP14.4□□□□□ -0.1
HDAC4-216ENST00000544989 RFX7Q2KHR2 1363 aa14.39□□□□□ -0.11
HDAC4-216ENST00000544989 WDHD1O75717 1129 aaPredicted RBP14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms