RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 RHBDL3P58872 404 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 ANAPC15P60006 121 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 ADCK5Q3MIX3 580 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 TSGA10IPQ3SY00 556 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 TMED8Q6PL24 325 aaPredicted RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 ZGPATQ8N5A5 531 aaKnown RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 TBC1D22AQ8WUA7 517 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 TMX4Q9H1E5 349 aaPredicted RBP8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 DAGLAQ9Y4D2 1042 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 PCDHAC2Q9Y5I4 1007 aa8.37□□□□□ -1.07
HMGCS2-204ENST00000544913 MROH7-TTC4A0A0A0MT08 1334 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 ZMYM6O95789 1325 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 GPR75-ASB3A0A0A6YYF3 556 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 DDX11L8A8MPP1 907 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 FGAP02671 866 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 VIL1P09327 827 aaKnown RBP8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 PPP4CP60510 307 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 EVX2Q03828 476 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 ALX1Q15699 326 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 LRRFIP1Q32MZ4 808 aaKnown RBP8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 SPTY2D1Q68D10 685 aaPredicted RBP8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 RNF39Q9H2S5 420 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 SUGT1Q9Y2Z0 365 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 DICER1Q9UPY3 1922 aaKnown RBP8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 FOCADQ5VW36 1801 aa8.36□□□□□ -1.07
HMGCS2-204ENST00000544913 BAZ2AQ9UIF9 1905 aaKnown RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 USP17L3A6NCW0 530 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 USP17L4A6NCW7 530 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 ST18O60284 1047 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 HSP90AA1P07900 732 aaKnown RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 HOXD11P31277 338 aaPredicted RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 MCM2P49736 904 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 CXCL9Q07325 125 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 USP17L1Q7RTZ2 530 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 DZIP1Q86YF9 867 aaKnown RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 LARGE2Q8N3Y3 721 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 GBP4Q96PP9 640 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 ZNRF3Q9ULT6 936 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 U3KPZ7 1027 aaPredicted RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 MAGEB6P1A0A0J9YX57 407 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 FZD9O00144 591 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 PSMD14O00487 310 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 CPA1P15085 419 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 MCCP23508 829 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 APOBEC3HQ6NTF7 200 aaKnown RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 KIAA1211Q6ZU35 1233 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 TBC1D10CQ8IV04 446 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 SH3RF3Q8TEJ3 882 aaPredicted RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 SDR42E1Q8WUS8 393 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 AIDAQ96BJ3 306 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 TTC14Q96N46 770 aa8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 AATFQ9NY61 560 aaKnown RBP eCLIP8.35□□□□□ -1.07
HMGCS2-204ENST00000544913 PATL2C9JE40 543 aaKnown RBP8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 RAD17O75943 681 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 MCM4P33991 863 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 DDIT3P35638 169 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 BTDP43251 543 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 SCNN1DP51172 638 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 SKOR2Q2VWA4 1001 aaPredicted RBP8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 IFNL3Q8IZI9 196 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 UPF3BQ9BZI7 483 aaKnown RBP8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 ISY1Q9ULR0 285 aaKnown RBP8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 TTF2Q9UNY4 1162 aaKnown RBP8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 ZNF541Q9H0D2 1346 aa8.34□□□□□ -1.07
HMGCS2-204ENST00000544913 LAMB1P07942 1786 aa8.34□□□□□ -1.08
HMGCS2-204ENST00000544913 ECM29Q5VYK3 1845 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 SHTN1A0MZ66 631 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 F8W031 263 aaPredicted RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 WDHD1O75717 1129 aaPredicted RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 L1TD1Q5T7N2 865 aaKnown RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 RSBN1LQ6PCB5 846 aaPredicted RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 HHIPL2Q6UWX4 724 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 KIAA0825Q8IV33 1275 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 NIM1KQ8IY84 436 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 ZBED3Q96IU2 234 aaPredicted RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 MRIQ9BWK5 157 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 TM6SF1Q9BZW5 370 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 ZSWIM6Q9HCJ5 1215 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 DCP1AQ9NPI6 582 aaPredicted RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 ZBTB12Q9Y330 459 aaPredicted RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 SLC4A4Q9Y6R1 1079 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 SIPA1L1O43166 1804 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 NAV1Q8NEY1 1877 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 GNAT2P19087 354 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 HAND2P61296 217 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 NUCB2P80303 420 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 FBXW7Q969H0 707 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 ZDHHC15Q96MV8 337 aa8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 DDX4Q9NQI0 724 aaKnown RBP8.33□□□□□ -1.08
HMGCS2-204ENST00000544913 CYP2D7A0A087X1C5 515 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 GOLGA6L22H0YM25 854 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 EGFRP00533 1210 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 CYP2D6P10635 497 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 CRKP46108 304 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 GSTO1P78417 241 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 CDC42EP5Q6NZY7 148 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 GIMAP6Q6P9H5 292 aa8.32□□□□□ -1.08
HMGCS2-204ENST00000544913 CTR9Q6PD62 1173 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms