RNA–Protein interactions for RNA: ENST00000544610.1

CDCA3-209, Transcript of cell division cycle associated 3, humanhuman

TSL 3

Gene CDCA3, Length 624 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-209ENST00000544610 PPP2R3BQ9Y5P8 575 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 CENPFP49454 3210 aa8.18□□□□□ -1.1
CDCA3-209ENST00000544610 ANKRD18BA2A2Z9 1011 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 TESPA1A2RU30 521 aaPredicted RBP8.17□□□□□ -1.1
CDCA3-209ENST00000544610 FKTNO75072 461 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 ALDH1A1P00352 501 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 ZBTB48P10074 688 aaPredicted RBP8.17□□□□□ -1.1
CDCA3-209ENST00000544610 KCNJ4P48050 445 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 PRKG1Q13976 671 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 ITPRIPQ8IWB1 547 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 CERS5Q8N5B7 392 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 EXOC6Q8TAG9 804 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 RNF166Q96A37 237 aaPredicted RBP8.17□□□□□ -1.1
CDCA3-209ENST00000544610 DEFB129Q9H1M3 183 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 R3HDMLQ9H3Y0 253 aa8.17□□□□□ -1.1
CDCA3-209ENST00000544610 ANGEL1Q9UNK9 670 aaKnown RBP8.17□□□□□ -1.1
CDCA3-209ENST00000544610 MKI67P46013 3256 aaKnown RBP8.17□□□□□ -1.1
CDCA3-209ENST00000544610 MANSC4A6NHS7 340 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-209ENST00000544610 UNCXA6NJT0 531 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 SNAP23O00161 211 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 IL1R1P14778 569 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 INHBEP58166 350 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 FKBP1AP62942 108 aaKnown RBP8.16□□□□□ -1.1
CDCA3-209ENST00000544610 FOXO4P98177 505 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 IFIT5Q13325 482 aaKnown RBP8.16□□□□□ -1.1
CDCA3-209ENST00000544610 DLGAP5Q15398 846 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 ECM29Q5VYK3 1845 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 CENPQQ7L2Z9 268 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-209ENST00000544610 ZNF804AQ7Z570 1209 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 IFNL1Q8IU54 200 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 CCDC136Q96JN2 1154 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 HS3ST6Q96QI5 342 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 RWDD1Q9H446 243 aaPredicted RBP8.16□□□□□ -1.1
CDCA3-209ENST00000544610 PCDHB8Q9UN66 801 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 FZD1Q9UP38 647 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 PCDHB13Q9Y5F0 798 aa8.16□□□□□ -1.1
CDCA3-209ENST00000544610 MYO1BO43795 1136 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 PPP1R12BO60237 982 aaPredicted RBP8.15□□□□□ -1.1
CDCA3-209ENST00000544610 TAF5LO75529 589 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 GNAI2P04899 355 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 PSEN1P49768 467 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 MTX1Q13505 466 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 CFAP100Q494V2 611 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 SMYD5Q6GMV2 418 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 WNK4Q96J92 1243 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 PCDHAC2Q9Y5I4 1007 aa8.15□□□□□ -1.1
CDCA3-209ENST00000544610 AOX1Q06278 1338 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 CLRN2A0PK11 232 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 F8W031 263 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-209ENST00000544610 GRM8O00222 908 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 IGF2BP3O00425 579 aaKnown RBP eCLIP8.14□□□□□ -1.11
CDCA3-209ENST00000544610 HMMRO75330 724 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 SUPT20HL1Q3ZLR7 823 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 OTOP1Q7RTM1 612 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 HELBQ8NG08 1087 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-209ENST00000544610 SLC10A4Q96EP9 437 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 CLMNQ96JQ2 1002 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 PRMT6Q96LA8 375 aaPredicted RBP8.14□□□□□ -1.11
CDCA3-209ENST00000544610 USP44Q9H0E7 712 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 ARAP2Q8WZ64 1704 aa8.14□□□□□ -1.11
CDCA3-209ENST00000544610 FAM205AQ6ZU69 1335 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 F6X3S4 739 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 UBTFL1P0CB47 393 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-209ENST00000544610 GJA5P36382 358 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 IREB2P48200 963 aaKnown RBP8.13□□□□□ -1.11
CDCA3-209ENST00000544610 CCDC57Q2TAC2 916 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 EPHA10Q5JZY3 1008 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 NBPF12Q5TAG4 269 aaPredicted RBP8.13□□□□□ -1.11
CDCA3-209ENST00000544610 SLC4A10Q6U841 1118 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 LMBR1LQ6UX01 489 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 ANKRD44Q8N8A2 993 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 GCC1Q96CN9 775 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 VEZTQ9HBM0 779 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 JAG2Q9Y219 1238 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 CHMP3Q9Y3E7 222 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 TRIM17Q9Y577 477 aa8.13□□□□□ -1.11
CDCA3-209ENST00000544610 OTOFQ9HC10 1997 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 POTEB3A0JP26 581 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 FAM205CA6NFA0 338 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 USP2O75604 605 aaPredicted RBP8.12□□□□□ -1.11
CDCA3-209ENST00000544610 PPP1R37O75864 691 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 IRX6P78412 446 aaPredicted RBP8.12□□□□□ -1.11
CDCA3-209ENST00000544610 CRHR2Q13324 411 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 TNFAIP1Q13829 316 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 RASA3Q14644 834 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 POTEBQ6S5H4 581 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 LDHAL6AQ6ZMR3 332 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 SMC5Q8IY18 1101 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 ANKRD13AQ8IZ07 590 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 ERO1AQ96HE7 468 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 ZNF594Q96JF6 807 aaPredicted RBP8.12□□□□□ -1.11
CDCA3-209ENST00000544610 SERPINA10Q9UK55 444 aa8.12□□□□□ -1.11
CDCA3-209ENST00000544610 RBBP6Q7Z6E9 1792 aaKnown RBP8.12□□□□□ -1.11
CDCA3-209ENST00000544610 ZMYND10O75800 440 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 PLCG2P16885 1265 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 RBM5P52756 815 aaKnown RBP eCLIP8.11□□□□□ -1.11
CDCA3-209ENST00000544610 ATP8B2P98198 1209 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 UBE4AQ14139 1066 aa8.11□□□□□ -1.11
CDCA3-209ENST00000544610 RABL6Q3YEC7 729 aaPredicted RBP8.11□□□□□ -1.11
CDCA3-209ENST00000544610 HSP90AB4PQ58FF6 505 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms