RNA–Protein interactions for RNA: ENST00000543590.1

VPS37B-204, Transcript of VPS37B, ESCRT-I subunit, humanhuman

TSL 3

Gene VPS37B, Length 1,457 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-204ENST00000543590 PI16Q6UXB8 463 aa17.59■□□□□ 0.41
VPS37B-204ENST00000543590 DZIP1Q86YF9 867 aaKnown RBP17.59■□□□□ 0.41
VPS37B-204ENST00000543590 SPATA5Q8NB90 893 aa17.59■□□□□ 0.41
VPS37B-204ENST00000543590 WNK4Q96J92 1243 aa17.59■□□□□ 0.41
VPS37B-204ENST00000543590 CASP8AP2Q9UKL3 1982 aa17.59■□□□□ 0.41
VPS37B-204ENST00000543590 UQCRFS1P1P0C7P4 283 aa17.58■□□□□ 0.41
VPS37B-204ENST00000543590 ZBTB48P10074 688 aaPredicted RBP17.58■□□□□ 0.41
VPS37B-204ENST00000543590 SREBF2Q12772 1141 aa17.58■□□□□ 0.41
VPS37B-204ENST00000543590 DBNDD2Q9BQY9 259 aa17.58■□□□□ 0.41
VPS37B-204ENST00000543590 USP40Q9NVE5 1235 aa17.58■□□□□ 0.41
VPS37B-204ENST00000543590 DDX19BQ9UMR2 479 aa17.58■□□□□ 0.41
VPS37B-204ENST00000543590 GAKO14976 1311 aa17.58■□□□□ 0.4
VPS37B-204ENST00000543590 MCAMP43121 646 aa17.57■□□□□ 0.4
VPS37B-204ENST00000543590 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.57■□□□□ 0.4
VPS37B-204ENST00000543590 ERICH6Q7L0X2 663 aa17.57■□□□□ 0.4
VPS37B-204ENST00000543590 SLF2Q8IX21 1173 aa17.57■□□□□ 0.4
VPS37B-204ENST00000543590 FAM151AQ8WW52 585 aa17.57■□□□□ 0.4
VPS37B-204ENST00000543590 FAM163AQ96GL9 167 aaPredicted RBP17.57■□□□□ 0.4
VPS37B-204ENST00000543590 RPAP1Q9BWH6 1393 aaPredicted RBP17.57■□□□□ 0.4
VPS37B-204ENST00000543590 MYH2Q9UKX2 1941 aa17.57■□□□□ 0.4
VPS37B-204ENST00000543590 MANSC4A6NHS7 340 aaPredicted RBP17.56■□□□□ 0.4
VPS37B-204ENST00000543590 GJA5P36382 358 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 MAP3K9P80192 1104 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 MECOMQ03112 1051 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 TCP10Q12799 353 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 NFIAQ12857 509 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 TBC1D9Q6ZT07 1266 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.56■□□□□ 0.4
VPS37B-204ENST00000543590 HOOK2Q96ED9 719 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 ELP3Q9H9T3 547 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 ZBTB40Q9NUA8 1239 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 INHBEP58166 350 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 VGLL4Q14135 290 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 CCDC158Q5M9N0 1113 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 TTC39AQ5SRH9 613 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 ZNF384Q8TF68 577 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 FAM198AQ9UFP1 575 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 OTOFQ9HC10 1997 aa17.56■□□□□ 0.4
VPS37B-204ENST00000543590 TBC1D8O95759 1140 aa17.55■□□□□ 0.4
VPS37B-204ENST00000543590 RPAP2Q8IXW5 612 aaPredicted RBP17.55■□□□□ 0.4
VPS37B-204ENST00000543590 SNRKQ9NRH2 765 aa17.55■□□□□ 0.4
VPS37B-204ENST00000543590 EXOC6BQ9Y2D4 811 aa17.55■□□□□ 0.4
VPS37B-204ENST00000543590 MROH7-TTC4A0A0A0MT08 1334 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 BTDP43251 543 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 C20orf194Q5TEA3 1177 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 DCAF15Q66K64 600 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 ERC1Q8IUD2 1116 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 ZFPM1Q8IX07 1006 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 EAF2Q96CJ1 260 aaPredicted RBP17.54■□□□□ 0.4
VPS37B-204ENST00000543590 OPTNQ96CV9 577 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 IDI2Q9BXS1 227 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 TLR7Q9NYK1 1049 aaKnown RBP17.54■□□□□ 0.4
VPS37B-204ENST00000543590 RAI14Q9P0K7 980 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 DBNLQ9UJU6 430 aaKnown RBP17.54■□□□□ 0.4
VPS37B-204ENST00000543590 CSADQ9Y600 493 aa17.54■□□□□ 0.4
VPS37B-204ENST00000543590 GPR75-ASB3A0A0A6YYF3 556 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 PDE3AQ14432 1141 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 MIGA2Q7L4E1 593 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 IFNL1Q8IU54 200 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 SIRT2Q8IXJ6 389 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.53■□□□□ 0.4
VPS37B-204ENST00000543590 CNKSR2Q8WXI2 1034 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 NSUN4Q96CB9 384 aaKnown RBP17.53■□□□□ 0.4
VPS37B-204ENST00000543590 ABHD8Q96I13 439 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 ZNF512BQ96KM6 892 aaPredicted RBP17.53■□□□□ 0.4
VPS37B-204ENST00000543590 WRNIP1Q96S55 665 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 CCDC8Q9H0W5 538 aaPredicted RBP17.53■□□□□ 0.4
VPS37B-204ENST00000543590 CHMP4BQ9H444 224 aaKnown RBP17.53■□□□□ 0.4
VPS37B-204ENST00000543590 LRP2BPQ9P2M1 347 aa17.53■□□□□ 0.4
VPS37B-204ENST00000543590 LDHCP07864 332 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 RGS3P49796 1198 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 GSTO1P78417 241 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 DGKZQ13574 1117 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 HSP90AB4PQ58FF6 505 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 ZNF341Q9BYN7 854 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 MCOLN1Q9GZU1 580 aa17.52■□□□□ 0.4
VPS37B-204ENST00000543590 RFX7Q2KHR2 1363 aa17.51■□□□□ 0.39
VPS37B-204ENST00000543590 IGF2BP3O00425 579 aaKnown RBP eCLIP17.51■□□□□ 0.39
VPS37B-204ENST00000543590 ENTPD3O75355 529 aa17.51■□□□□ 0.39
VPS37B-204ENST00000543590 WDHD1O75717 1129 aaPredicted RBP17.51■□□□□ 0.39
VPS37B-204ENST00000543590 ALDH1A1P00352 501 aa17.51■□□□□ 0.39
VPS37B-204ENST00000543590 ZKSCAN4Q969J2 545 aaPredicted RBP17.51■□□□□ 0.39
VPS37B-204ENST00000543590 CFHR5Q9BXR6 569 aa17.51■□□□□ 0.39
VPS37B-204ENST00000543590 SNCAIPQ9Y6H5 919 aa17.51■□□□□ 0.39
VPS37B-204ENST00000543590 LAMB1P07942 1786 aa17.51■□□□□ 0.39
VPS37B-204ENST00000543590 TESPA1A2RU30 521 aaPredicted RBP17.5■□□□□ 0.39
VPS37B-204ENST00000543590 HMMRO75330 724 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 CYP2E1P05181 493 aaPredicted RBP17.5■□□□□ 0.39
VPS37B-204ENST00000543590 RHBDL3P58872 404 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 AACSQ86V21 672 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 RHPN1Q8TCX5 695 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 OTUD5Q96G74 571 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 MS4A4AQ96JQ5 239 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 R3HDMLQ9H3Y0 253 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 AK9Q5TCS8 1911 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 SPDYE5A6NIY4 337 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 GPR25O00155 361 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 INPP5BP32019 993 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 ZAP70P43403 619 aa17.5■□□□□ 0.39
VPS37B-204ENST00000543590 NOM1Q5C9Z4 860 aaKnown RBP17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms