RNA–Protein interactions for RNA: ENST00000543153.1

RFC5-209, Transcript of replication factor C subunit 5, humanhuman

TSL 5

Gene RFC5, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-209ENST00000543153 SERPINB2P05120 415 aa13.46□□□□□ -0.25
RFC5-209ENST00000543153 POLMQ9NP87 494 aaPredicted RBP13.46□□□□□ -0.25
RFC5-209ENST00000543153 H0YIN7 160 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 GPC1P35052 558 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 RASSF7Q02833 373 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 C6orf118Q5T5N4 469 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 C2CD5Q86YS7 1000 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 NBPF15Q8N660 670 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 PRIMPOLQ96LW4 560 aa13.45□□□□□ -0.26
RFC5-209ENST00000543153 INSM2Q96T92 566 aaPredicted RBP13.45□□□□□ -0.26
RFC5-209ENST00000543153 BRCA1P38398 1863 aaKnown RBP13.44□□□□□ -0.26
RFC5-209ENST00000543153 CDK2AP1O14519 115 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 MTFR1Q15390 333 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 ZNF790Q6PG37 636 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 CRIPAKQ8N1N5 446 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 TTLL6Q8N841 843 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 ZNF496Q96IT1 587 aaPredicted RBP13.44□□□□□ -0.26
RFC5-209ENST00000543153 FMNL2Q96PY5 1086 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 TEX13AQ9BXU3 409 aaPredicted RBP13.44□□□□□ -0.26
RFC5-209ENST00000543153 SCHIP1Q9P0W5 487 aaPredicted RBP13.44□□□□□ -0.26
RFC5-209ENST00000543153 HRH3Q9Y5N1 445 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 HEG1Q9ULI3 1381 aa13.44□□□□□ -0.26
RFC5-209ENST00000543153 ARFGEF1Q9Y6D6 1849 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 COL3A1P02461 1466 aaPredicted RBP13.43□□□□□ -0.26
RFC5-209ENST00000543153 LGR5O75473 907 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 PRKAR2BP31323 418 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 ZSCAN10Q96SZ4 725 aaPredicted RBP13.43□□□□□ -0.26
RFC5-209ENST00000543153 RRAGCQ9HB90 399 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 NUDCQ9Y266 331 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 CHMP3Q9Y3E7 222 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 ADAMTS7Q9UKP4 1686 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 NPC1L1Q9UHC9 1359 aa13.43□□□□□ -0.26
RFC5-209ENST00000543153 BTBD11A6QL63 1104 aa13.42□□□□□ -0.26
RFC5-209ENST00000543153 LMNB1P20700 586 aa13.42□□□□□ -0.26
RFC5-209ENST00000543153 IGFBP4P22692 258 aa13.42□□□□□ -0.26
RFC5-209ENST00000543153 WEE1P30291 646 aa13.42□□□□□ -0.26
RFC5-209ENST00000543153 RNF144AP50876 292 aaPredicted RBP13.42□□□□□ -0.26
RFC5-209ENST00000543153 EPHA4P54764 986 aa13.42□□□□□ -0.26
RFC5-209ENST00000543153 TMEM214Q6NUQ4 689 aaKnown RBP13.42□□□□□ -0.26
RFC5-209ENST00000543153 SCG3Q8WXD2 468 aaKnown RBP13.42□□□□□ -0.26
RFC5-209ENST00000543153 RTF1Q92541 710 aaKnown RBP13.42□□□□□ -0.26
RFC5-209ENST00000543153 ZNF622Q969S3 477 aaKnown RBP eCLIP13.42□□□□□ -0.26
RFC5-209ENST00000543153 CARMIL3Q8ND23 1372 aa13.42□□□□□ -0.26
RFC5-209ENST00000543153 EIF5P55010 431 aaKnown RBP13.41□□□□□ -0.26
RFC5-209ENST00000543153 KCNA1Q09470 495 aa13.41□□□□□ -0.26
RFC5-209ENST00000543153 FSTL1Q12841 308 aa13.41□□□□□ -0.26
RFC5-209ENST00000543153 TBC1D9BQ66K14 1250 aa13.41□□□□□ -0.26
RFC5-209ENST00000543153 SLC9A9Q8IVB4 645 aa13.41□□□□□ -0.26
RFC5-209ENST00000543153 IL17REQ8NFR9 667 aa13.41□□□□□ -0.26
RFC5-209ENST00000543153 PURBQ96QR8 312 aaKnown RBP13.41□□□□□ -0.26
RFC5-209ENST00000543153 TSPAN10Q9H1Z9 355 aaPredicted RBP13.41□□□□□ -0.26
RFC5-209ENST00000543153 CXXC1Q9P0U4 656 aaPredicted RBP13.41□□□□□ -0.26
RFC5-209ENST00000543153 UBR2Q8IWV8 1755 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 U2AF1L5P0DN76 240 aaPredicted RBP13.4□□□□□ -0.26
RFC5-209ENST00000543153 PDE6BP35913 854 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 U2AF1Q01081 240 aaKnown RBP eCLIP13.4□□□□□ -0.26
RFC5-209ENST00000543153 FOXK2Q01167 660 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 OCLNQ16625 522 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 GNASQ5JWF2 1037 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 CNBD1Q8NA66 436 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 VTI1AQ96AJ9 217 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 SETDB2Q96T68 719 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 MTMR7Q9Y216 660 aa13.4□□□□□ -0.26
RFC5-209ENST00000543153 VIRMAQ69YN4 1812 aaKnown RBP13.39□□□□□ -0.27
RFC5-209ENST00000543153 PPP1R12BO60237 982 aaPredicted RBP13.39□□□□□ -0.27
RFC5-209ENST00000543153 A1BGP04217 495 aa13.39□□□□□ -0.27
RFC5-209ENST00000543153 BMP1P13497 986 aa13.39□□□□□ -0.27
RFC5-209ENST00000543153 IL6STP40189 918 aaPredicted RBP13.39□□□□□ -0.27
RFC5-209ENST00000543153 ST5P78524 1137 aa13.39□□□□□ -0.27
RFC5-209ENST00000543153 SMC1BQ8NDV3 1235 aa13.39□□□□□ -0.27
RFC5-209ENST00000543153 C1orf216Q8TAB5 229 aa13.39□□□□□ -0.27
RFC5-209ENST00000543153 SCN7AQ01118 1682 aa13.38□□□□□ -0.27
RFC5-209ENST00000543153 TNRC6CQ9HCJ0 1690 aaKnown RBP13.38□□□□□ -0.27
RFC5-209ENST00000543153 CTSOP43234 321 aaPredicted RBP13.38□□□□□ -0.27
RFC5-209ENST00000543153 HTRA3P83110 453 aa13.38□□□□□ -0.27
RFC5-209ENST00000543153 PHACTR3Q96KR7 559 aa13.38□□□□□ -0.27
RFC5-209ENST00000543153 BRIP1Q9BX63 1249 aa13.38□□□□□ -0.27
RFC5-209ENST00000543153 GRIP2Q9C0E4 1043 aa13.38□□□□□ -0.27
RFC5-209ENST00000543153 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.38□□□□□ -0.276e-6■■■■■ 48.1
RFC5-209ENST00000543153 AFDNP55196 1824 aaKnown RBP13.38□□□□□ -0.27
RFC5-209ENST00000543153 NRXN2Q9P2S2 1712 aa13.37□□□□□ -0.27
RFC5-209ENST00000543153 C21orf2O43822 256 aa13.37□□□□□ -0.27
RFC5-209ENST00000543153 NEFMP07197 916 aa13.37□□□□□ -0.27
RFC5-209ENST00000543153 ARID4AP29374 1257 aaPredicted RBP13.37□□□□□ -0.27
RFC5-209ENST00000543153 PIP4K2AP48426 406 aaPredicted RBP13.37□□□□□ -0.27
RFC5-209ENST00000543153 PSMA6P60900 246 aaKnown RBP13.37□□□□□ -0.27
RFC5-209ENST00000543153 PRR5LQ6MZQ0 368 aa13.37□□□□□ -0.27
RFC5-209ENST00000543153 NIFKQ9BYG3 293 aaKnown RBP13.37□□□□□ -0.27
RFC5-209ENST00000543153 ZNF652Q9Y2D9 606 aa13.37□□□□□ -0.27
RFC5-209ENST00000543153 WDR90Q96KV7 1748 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 CEMIPQ8WUJ3 1361 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 GLTPD2A6NH11 291 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 TTLL8A6PVC2 850 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 NFKBIEO00221 500 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 KCNQ3O43525 872 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 VEGFAP15692 232 aaPredicted RBP13.36□□□□□ -0.27
RFC5-209ENST00000543153 TBCELQ5QJ74 424 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 MCM10Q7L590 875 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 TRIM46Q7Z4K8 759 aa13.36□□□□□ -0.27
RFC5-209ENST00000543153 NBPF5PQ86XG9 351 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms