RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 GRNP28799 593 aaKnown RBP5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 LIG3P49916 1009 aa5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 FOXD4L6Q3SYB3 417 aaPredicted RBP5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 SNAP47Q5SQN1 464 aa5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 FOXD4L3Q6VB84 417 aaPredicted RBP5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 DTHD1Q6ZMT9 781 aa5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 SRRTQ9BXP5 876 aaKnown RBP5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 UBE2OQ9C0C9 1292 aaKnown RBP5.46□□□□□ -1.54
SFSWAP-211ENST00000542813 A0A0A0MRY4 1105 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 TMEM238LA0A1B0GVL6 79 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 SMAD7O15105 426 aaKnown RBP5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 EGFRP00533 1210 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 H2AFB1P0C5Y9 115 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 H2AFB2P0C5Z0 115 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 RAC1P63000 192 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 NRG1Q02297 640 aaPredicted RBP5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 LMNB2Q03252 620 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 TBC1D8BQ0IIM8 1120 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 IFRD2Q12894 506 aaPredicted RBP5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 ADGRE1Q14246 886 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 MBTPS1Q14703 1052 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 ARSHQ5FYA8 562 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 PRSS36Q5K4E3 855 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 PEAR1Q5VY43 1037 aaPredicted RBP5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 TPTE2Q6XPS3 522 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 CCDC81Q6ZN84 652 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 HOMER1Q86YM7 354 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 CERS3Q8IU89 383 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 RPUSD2Q8IZ73 545 aaKnown RBP5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 GOLM1Q8NBJ4 401 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 TRPM4Q8TD43 1214 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 NKD1Q969G9 470 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 SHDQ96IW2 340 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 CCDC113Q9H0I3 377 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 JPH1Q9HDC5 661 aaPredicted RBP5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 ABCB6Q9NP58 842 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 KANSL3Q9P2N6 904 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 SLC6A14Q9UN76 642 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 TLR6Q9Y2C9 796 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 SUGT1Q9Y2Z0 365 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 MSRB2Q9Y3D2 182 aa5.45□□□□□ -1.54
SFSWAP-211ENST00000542813 ESYT3A0FGR9 886 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 CYP2E1P05181 493 aaPredicted RBP5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 CELA3AP09093 270 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 SELPP16109 830 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 CAMK2GQ13555 558 aaPredicted RBP5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 PLEKHG6Q3KR16 790 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 TAF7LQ5H9L4 462 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 ARTNQ5T4W7 220 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 TXNRD3Q86VQ6 643 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 DHX37Q8IY37 1157 aaKnown RBP5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 LILRB2Q8N423 598 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 CELF2-AS1Q8N7Q2 184 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 LENG1Q96BZ8 264 aaPredicted RBP5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 DNAJC7Q99615 494 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 IRF2BPLQ9H1B7 796 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 KANSL2Q9H9L4 492 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 LIN7BQ9HAP6 207 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 ZFP64Q9NPA5 681 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 C11orf16Q9NQ32 467 aa5.44□□□□□ -1.54
SFSWAP-211ENST00000542813 CRKP46108 304 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 AMPD3Q01432 767 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 DDR2Q16832 855 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 HSP90AB2PQ58FF8 381 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 FAM196AQ6ZSG2 479 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 KIAA0907Q7Z7F0 614 aaPredicted RBP5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 SLITRK4Q8IW52 837 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 PNMA5Q96PV4 448 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 CEP44Q9C0F1 390 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 IGFLR1Q9H665 355 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 ZFYVE1Q9HBF4 777 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 DNAJB12Q9NXW2 375 aaKnown RBP5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 DDX56Q9NY93 547 aaKnown RBP5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 PPT2Q9UMR5 302 aa5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.43□□□□□ -1.54
SFSWAP-211ENST00000542813 KRTAP4-8A0A0G2JLE6 195 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 PDPK1O15530 556 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 S100BP04271 92 aaPredicted RBP5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 AFF1P51825 1210 aaKnown RBP5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 GYS2P54840 703 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 EIF6P56537 245 aaKnown RBP5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 CCINQ13939 588 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 SEZ6Q53EL9 994 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 TTBK2Q6IQ55 1244 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 PSAPL1Q6NUJ1 521 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 FMR1NBQ8N0W7 255 aaPredicted RBP5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 NUDT8Q8WV74 236 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 TCF12Q99081 682 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 GSX2Q9BZM3 304 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 ST7Q9NRC1 585 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 TMEM260Q9NX78 707 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 ACTR10Q9NZ32 417 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 CHPF2Q9P2E5 772 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 MAPK8IP1Q9UQF2 711 aa5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.42□□□□□ -1.54
SFSWAP-211ENST00000542813 BTBD11A6QL63 1104 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 RGS9O75916 674 aaPredicted RBP5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 TRIM37O94972 964 aa5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 TFE3P19532 575 aaPredicted RBP5.41□□□□□ -1.54
SFSWAP-211ENST00000542813 RASGRF1Q13972 1273 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms