RNA–Protein interactions for RNA: ENST00000542541.6

HOMER3-205, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,607 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-205ENST00000542541 SAMD7Q7Z3H4 446 aa27.78■■■□□ 2.04
HOMER3-205ENST00000542541 TBC1D10BQ4KMP7 808 aaPredicted RBP27.77■■■□□ 2.04
HOMER3-205ENST00000542541 PRMT6Q96LA8 375 aaPredicted RBP27.77■■■□□ 2.04
HOMER3-205ENST00000542541 RAD50Q92878 1312 aa27.76■■■□□ 2.03
HOMER3-205ENST00000542541 ZBED3Q96IU2 234 aaPredicted RBP27.76■■■□□ 2.03
HOMER3-205ENST00000542541 SEC62Q99442 399 aaKnown RBP27.76■■■□□ 2.03
HOMER3-205ENST00000542541 RIOK1Q9BRS2 568 aaKnown RBP27.76■■■□□ 2.03
HOMER3-205ENST00000542541 MYH7P12883 1935 aa27.76■■■□□ 2.03
HOMER3-205ENST00000542541 MBD4O95243 580 aa27.75■■■□□ 2.03
HOMER3-205ENST00000542541 EPHX2P34913 555 aa27.75■■■□□ 2.03
HOMER3-205ENST00000542541 USP40Q9NVE5 1235 aa27.75■■■□□ 2.03
HOMER3-205ENST00000542541 MYH2Q9UKX2 1941 aa27.75■■■□□ 2.03
HOMER3-205ENST00000542541 M0R2C6 588 aa27.74■■■□□ 2.03
HOMER3-205ENST00000542541 WNT10BO00744 389 aa27.74■■■□□ 2.03
HOMER3-205ENST00000542541 GPAA1O43292 621 aa27.74■■■□□ 2.03
HOMER3-205ENST00000542541 VEGFAP15692 232 aaPredicted RBP27.74■■■□□ 2.03
HOMER3-205ENST00000542541 PCDHAC2Q9Y5I4 1007 aa27.74■■■□□ 2.03
HOMER3-205ENST00000542541 DYNLL1P63167 89 aaKnown RBP27.74■■■□□ 2.03
HOMER3-205ENST00000542541 USP50Q70EL3 339 aaPredicted RBP27.74■■■□□ 2.03
HOMER3-205ENST00000542541 CRNKL1Q9BZJ0 848 aaKnown RBP27.74■■■□□ 2.03
HOMER3-205ENST00000542541 ARMT1Q9H993 441 aa27.74■■■□□ 2.03
HOMER3-205ENST00000542541 TMOD2Q9NZR1 351 aa27.74■■■□□ 2.03
HOMER3-205ENST00000542541 SGSM2O43147 1006 aa27.73■■■□□ 2.03
HOMER3-205ENST00000542541 GNAT2P19087 354 aa27.73■■■□□ 2.03
HOMER3-205ENST00000542541 CDC42EP5Q6NZY7 148 aa27.73■■■□□ 2.03
HOMER3-205ENST00000542541 PNMA8AQ86V59 439 aaPredicted RBP27.73■■■□□ 2.03
HOMER3-205ENST00000542541 LCORLQ8N3X6 602 aa27.73■■■□□ 2.03
HOMER3-205ENST00000542541 STRBPQ96SI9 672 aaKnown RBP27.73■■■□□ 2.03
HOMER3-205ENST00000542541 ESYT1Q9BSJ8 1104 aa27.73■■■□□ 2.03
HOMER3-205ENST00000542541 WDR90Q96KV7 1748 aa27.73■■■□□ 2.03
HOMER3-205ENST00000542541 POTECB2RU33 542 aa27.72■■■□□ 2.03
HOMER3-205ENST00000542541 EIF5BO60841 1220 aaKnown RBP27.72■■■□□ 2.03
HOMER3-205ENST00000542541 EGFRP00533 1210 aa27.72■■■□□ 2.03
HOMER3-205ENST00000542541 RHBDL3P58872 404 aa27.72■■■□□ 2.03
HOMER3-205ENST00000542541 NBPF9Q3BBW0 867 aa27.72■■■□□ 2.03
HOMER3-205ENST00000542541 TAF1DQ9H5J8 278 aaPredicted RBP27.72■■■□□ 2.03
HOMER3-205ENST00000542541 TDRD3Q9H7E2 651 aaKnown RBP27.72■■■□□ 2.03
HOMER3-205ENST00000542541 CCDC171Q6TFL3 1326 aa27.72■■■□□ 2.03
HOMER3-205ENST00000542541 TRPM4Q8TD43 1214 aa27.71■■■□□ 2.03
HOMER3-205ENST00000542541 SH3RF3Q8TEJ3 882 aaPredicted RBP27.71■■■□□ 2.03
HOMER3-205ENST00000542541 RRAGCQ9HB90 399 aa27.71■■■□□ 2.03
HOMER3-205ENST00000542541 TEX11Q8IYF3 940 aa27.7■■■□□ 2.03
HOMER3-205ENST00000542541 YY1P25490 414 aa27.7■■■□□ 2.02
HOMER3-205ENST00000542541 SPDYE2Q495Y8 402 aa27.7■■■□□ 2.02
HOMER3-205ENST00000542541 CCDC129Q6ZRS4 1044 aa27.7■■■□□ 2.02
HOMER3-205ENST00000542541 KIAA1211Q6ZU35 1233 aa27.7■■■□□ 2.02
HOMER3-205ENST00000542541 ZNF526Q8TF50 670 aaPredicted RBP27.7■■■□□ 2.02
HOMER3-205ENST00000542541 ZNF70Q9UC06 446 aaPredicted RBP27.7■■■□□ 2.02
HOMER3-205ENST00000542541 SLC4A4Q9Y6R1 1079 aa27.7■■■□□ 2.02
HOMER3-205ENST00000542541 SCN4AP35499 1836 aa27.69■■■□□ 2.02
HOMER3-205ENST00000542541 ZNF589Q86UQ0 364 aaPredicted RBP27.69■■■□□ 2.02
HOMER3-205ENST00000542541 HIRAP54198 1017 aaPredicted RBP27.68■■■□□ 2.02
HOMER3-205ENST00000542541 DDRGK1Q96HY6 314 aa27.68■■■□□ 2.02
HOMER3-205ENST00000542541 RPAP1Q9BWH6 1393 aaPredicted RBP27.68■■■□□ 2.02
HOMER3-205ENST00000542541 USP5P45974 858 aa27.67■■■□□ 2.02
HOMER3-205ENST00000542541 FKBP1CQ5VVH2 108 aa27.67■■■□□ 2.02
HOMER3-205ENST00000542541 ZC3H15Q8WU90 426 aaKnown RBP27.67■■■□□ 2.02
HOMER3-205ENST00000542541 IDI2Q9BXS1 227 aa27.67■■■□□ 2.02
HOMER3-205ENST00000542541 CLRN2A0PK11 232 aa27.67■■■□□ 2.02
HOMER3-205ENST00000542541 PATL2C9JE40 543 aaKnown RBP27.67■■■□□ 2.02
HOMER3-205ENST00000542541 NACAP1Q9BZK3 213 aa27.67■■■□□ 2.02
HOMER3-205ENST00000542541 ATP8A2Q9NTI2 1148 aa27.67■■■□□ 2.02
HOMER3-205ENST00000542541 NPM3O75607 178 aaKnown RBP27.66■■■□□ 2.02
HOMER3-205ENST00000542541 APPP05067 770 aa27.66■■■□□ 2.02
HOMER3-205ENST00000542541 TNFAIP1Q13829 316 aa27.66■■■□□ 2.02
HOMER3-205ENST00000542541 EAPPQ56P03 285 aaPredicted RBP27.66■■■□□ 2.02
HOMER3-205ENST00000542541 TGFBRAP1Q8WUH2 860 aa27.66■■■□□ 2.02
HOMER3-205ENST00000542541 IL25Q9H293 177 aa27.66■■■□□ 2.02
HOMER3-205ENST00000542541 VEZTQ9HBM0 779 aa27.66■■■□□ 2.02
HOMER3-205ENST00000542541 NMRK2Q9NPI5 230 aa27.66■■■□□ 2.02
HOMER3-205ENST00000542541 WDHD1O75717 1129 aaPredicted RBP27.65■■■□□ 2.02
HOMER3-205ENST00000542541 REC8O95072 547 aa27.65■■■□□ 2.02
HOMER3-205ENST00000542541 GIMAP6Q6P9H5 292 aa27.65■■■□□ 2.02
HOMER3-205ENST00000542541 GPBP1L1Q9HC44 474 aaPredicted RBP27.65■■■□□ 2.02
HOMER3-205ENST00000542541 ADAMTSL1Q8N6G6 1762 aa27.64■■■□□ 2.02
HOMER3-205ENST00000542541 PRKAB2O43741 272 aa27.64■■■□□ 2.02
HOMER3-205ENST00000542541 TNNI2P48788 182 aa27.64■■■□□ 2.02
HOMER3-205ENST00000542541 C8orf34Q49A92 452 aa27.64■■■□□ 2.02
HOMER3-205ENST00000542541 GSG1L2A8MUP6 293 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 HSPD1P10809 573 aaKnown RBP27.63■■■□□ 2.01
HOMER3-205ENST00000542541 ANGEL2Q5VTE6 544 aaKnown RBP27.63■■■□□ 2.01
HOMER3-205ENST00000542541 APOBEC3FQ8IUX4 373 aaKnown RBP27.63■■■□□ 2.01
HOMER3-205ENST00000542541 SDR42E1Q8WUS8 393 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 DCPSQ96C86 337 aaKnown RBP27.63■■■□□ 2.01
HOMER3-205ENST00000542541 DSCC1Q9BVC3 393 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 ANO2Q9NQ90 1003 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 PITPNM2Q9BZ72 1349 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 ENTPD3O75355 529 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 CACNB3P54284 484 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 GGA3Q9NZ52 723 aa27.63■■■□□ 2.01
HOMER3-205ENST00000542541 TCP10L2B9ZVM9 353 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 NFIAQ12857 509 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 PICALMQ13492 652 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 VPS53Q5VIR6 699 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 FAM83AQ86UY5 434 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 MAPKAPK5Q8IW41 473 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 DCP1AQ9NPI6 582 aaPredicted RBP27.62■■■□□ 2.01
HOMER3-205ENST00000542541 PGAP2Q9UHJ9 254 aa27.62■■■□□ 2.01
HOMER3-205ENST00000542541 ASTN2O75129 1339 aaPredicted RBP27.61■■■□□ 2.01
HOMER3-205ENST00000542541 IFNL3Q8IZI9 196 aa27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms