RNA–Protein interactions for RNA: ENST00000542367.1

CCND1-205, Transcript of cyclin D1, humanhuman

TSL 1 (best)

Gene CCND1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-205ENST00000542367 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.25■□□□□ 0.83
CCND1-205ENST00000542367 ELP3Q9H9T3 547 aa20.25■□□□□ 0.83
CCND1-205ENST00000542367 GJA5P36382 358 aa20.24■□□□□ 0.83
CCND1-205ENST00000542367 SPTY2D1Q68D10 685 aaPredicted RBP20.24■□□□□ 0.83
CCND1-205ENST00000542367 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCND1-205ENST00000542367 USP40Q9NVE5 1235 aa20.24■□□□□ 0.83
CCND1-205ENST00000542367 HMG20BQ9P0W2 317 aa20.24■□□□□ 0.83
CCND1-205ENST00000542367 MS4A1P11836 297 aa20.23■□□□□ 0.83
CCND1-205ENST00000542367 TCP10Q12799 353 aa20.23■□□□□ 0.83
CCND1-205ENST00000542367 NFIAQ12857 509 aa20.23■□□□□ 0.83
CCND1-205ENST00000542367 DZIP1Q86YF9 867 aaKnown RBP20.23■□□□□ 0.83
CCND1-205ENST00000542367 FAM151AQ8WW52 585 aa20.23■□□□□ 0.83
CCND1-205ENST00000542367 OPTNQ96CV9 577 aa20.23■□□□□ 0.83
CCND1-205ENST00000542367 HOOK2Q96ED9 719 aa20.23■□□□□ 0.83
CCND1-205ENST00000542367 ARID4AP29374 1257 aaPredicted RBP20.22■□□□□ 0.83
CCND1-205ENST00000542367 VGLL4Q14135 290 aa20.22■□□□□ 0.83
CCND1-205ENST00000542367 ERICH6Q7L0X2 663 aa20.22■□□□□ 0.83
CCND1-205ENST00000542367 IFNL1Q8IU54 200 aa20.22■□□□□ 0.83
CCND1-205ENST00000542367 SPATA5Q8NB90 893 aa20.22■□□□□ 0.83
CCND1-205ENST00000542367 GPR108Q9NPR9 543 aa20.22■□□□□ 0.83
CCND1-205ENST00000542367 NOP58Q9Y2X3 529 aaKnown RBP20.22■□□□□ 0.83
CCND1-205ENST00000542367 CSADQ9Y600 493 aa20.22■□□□□ 0.83
CCND1-205ENST00000542367 MYH2Q9UKX2 1941 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 ALDH1A1P00352 501 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 TNNI3KQ59H18 835 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 CEP85Q6P2H3 762 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 PI16Q6UXB8 463 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 MIGA2Q7L4E1 593 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 SLF2Q8IX21 1173 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 CNKSR2Q8WXI2 1034 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 R3HDMLQ9H3Y0 253 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 FAM198AQ9UFP1 575 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 FPGT-TNNI3KV9GXZ4 949 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 GAKO14976 1311 aa20.21■□□□□ 0.83
CCND1-205ENST00000542367 RPAP1Q9BWH6 1393 aaPredicted RBP20.21■□□□□ 0.83
CCND1-205ENST00000542367 CCDC85CA6NKD9 419 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 GPR25O00155 361 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 IGF2BP3O00425 579 aaKnown RBP eCLIP20.2■□□□□ 0.82
CCND1-205ENST00000542367 UQCRFS1P1P0C7P4 283 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 DCAF15Q66K64 600 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 TBC1D9Q6ZT07 1266 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 ZNF296Q8WUU4 475 aaPredicted RBP20.2■□□□□ 0.82
CCND1-205ENST00000542367 FAM163AQ96GL9 167 aaPredicted RBP20.2■□□□□ 0.82
CCND1-205ENST00000542367 WRNIP1Q96S55 665 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 DBNDD2Q9BQY9 259 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 RCAN3Q9UKA8 241 aa20.2■□□□□ 0.82
CCND1-205ENST00000542367 MCAMP43121 646 aa20.19■□□□□ 0.82
CCND1-205ENST00000542367 MECOMQ03112 1051 aa20.19■□□□□ 0.82
CCND1-205ENST00000542367 ZFPM1Q8IX07 1006 aa20.19■□□□□ 0.82
CCND1-205ENST00000542367 ZKSCAN4Q969J2 545 aaPredicted RBP20.19■□□□□ 0.82
CCND1-205ENST00000542367 ZNF341Q9BYN7 854 aa20.19■□□□□ 0.82
CCND1-205ENST00000542367 AK9Q5TCS8 1911 aa20.18■□□□□ 0.82
CCND1-205ENST00000542367 TESPA1A2RU30 521 aaPredicted RBP20.18■□□□□ 0.82
CCND1-205ENST00000542367 NOM1Q5C9Z4 860 aaKnown RBP20.18■□□□□ 0.82
CCND1-205ENST00000542367 CCDC158Q5M9N0 1113 aa20.18■□□□□ 0.82
CCND1-205ENST00000542367 TTC39AQ5SRH9 613 aa20.18■□□□□ 0.82
CCND1-205ENST00000542367 CTU1Q7Z7A3 348 aaKnown RBP20.18■□□□□ 0.82
CCND1-205ENST00000542367 MS4A4AQ96JQ5 239 aa20.18■□□□□ 0.82
CCND1-205ENST00000542367 IDI2Q9BXS1 227 aa20.18■□□□□ 0.82
CCND1-205ENST00000542367 MROH7-TTC4A0A0A0MT08 1334 aa20.18■□□□□ 0.82
CCND1-205ENST00000542367 LAMB1P07942 1786 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 BTDP43251 543 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 RGS3P49796 1198 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 OTUD7BQ6GQQ9 843 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 ZNF384Q8TF68 577 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 NSUN4Q96CB9 384 aaKnown RBP20.17■□□□□ 0.82
CCND1-205ENST00000542367 OTUD5Q96G74 571 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 PTPN18Q99952 460 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 SNRKQ9NRH2 765 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 RAI14Q9P0K7 980 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 COG6Q9Y2V7 657 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 SNCAIPQ9Y6H5 919 aa20.17■□□□□ 0.82
CCND1-205ENST00000542367 GPR75-ASB3A0A0A6YYF3 556 aa20.16■□□□□ 0.82
CCND1-205ENST00000542367 SPDYE5A6NIY4 337 aa20.16■□□□□ 0.82
CCND1-205ENST00000542367 ENTPD3O75355 529 aa20.16■□□□□ 0.82
CCND1-205ENST00000542367 ERO1BQ86YB8 467 aa20.16■□□□□ 0.82
CCND1-205ENST00000542367 LRP2BPQ9P2M1 347 aa20.16■□□□□ 0.82
CCND1-205ENST00000542367 FKTNO75072 461 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 LDHCP07864 332 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 INPP5BP32019 993 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 GTF2A2P52657 109 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 GSTO1P78417 241 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 BRI3BPQ8WY22 251 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 EAF2Q96CJ1 260 aaPredicted RBP20.15■□□□□ 0.82
CCND1-205ENST00000542367 CCDC8Q9H0W5 538 aaPredicted RBP20.15■□□□□ 0.82
CCND1-205ENST00000542367 DBNLQ9UJU6 430 aaKnown RBP20.15■□□□□ 0.82
CCND1-205ENST00000542367 DDX19BQ9UMR2 479 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 EXOC6BQ9Y2D4 811 aa20.15■□□□□ 0.82
CCND1-205ENST00000542367 CCL15-CCL14A0A0B4J2E2 113 aa20.14■□□□□ 0.81
CCND1-205ENST00000542367 WDHD1O75717 1129 aaPredicted RBP20.14■□□□□ 0.81
CCND1-205ENST00000542367 RHBDL3P58872 404 aa20.14■□□□□ 0.81
CCND1-205ENST00000542367 CCL15Q16663 113 aa20.14■□□□□ 0.81
CCND1-205ENST00000542367 ZSCAN29Q8IWY8 852 aaPredicted RBP20.14■□□□□ 0.81
CCND1-205ENST00000542367 TLR7Q9NYK1 1049 aaKnown RBP20.14■□□□□ 0.81
CCND1-205ENST00000542367 ZNF112Q9UJU3 913 aa20.14■□□□□ 0.81
CCND1-205ENST00000542367 CRHR2Q13324 411 aa20.13■□□□□ 0.81
CCND1-205ENST00000542367 PICALMQ13492 652 aa20.13■□□□□ 0.81
CCND1-205ENST00000542367 SH3BP5LQ7L8J4 393 aa20.13■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms