RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MIER1Q8N108 512 aa19.36■□□□□ 0.69
VPS33A-206ENST00000542310 MAST2Q6P0Q8 1798 aa19.36■□□□□ 0.69
VPS33A-206ENST00000542310 RFX7Q2KHR2 1363 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 GAKO14976 1311 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 SPDYE5A6NIY4 337 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 MLLT1Q03111 559 aaPredicted RBP19.35■□□□□ 0.69
VPS33A-206ENST00000542310 RASGRF1Q13972 1273 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 DIXDC1Q155Q3 683 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 FAM151AQ8WW52 585 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 TNNQ9UQP3 1299 aa19.35■□□□□ 0.69
VPS33A-206ENST00000542310 ZBED9Q6R2W3 1325 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 GTF2A2P52657 109 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 TFCP2Q12800 502 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 CDC42EP5Q6NZY7 148 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 FBXO46Q6PJ61 603 aaPredicted RBP19.34■□□□□ 0.69
VPS33A-206ENST00000542310 CLUAP1Q96AJ1 413 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 MS4A4AQ96JQ5 239 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 WRNIP1Q96S55 665 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 R3HDMLQ9H3Y0 253 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.34■□□□□ 0.69
VPS33A-206ENST00000542310 HPS5Q9UPZ3 1129 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 SNCAIPQ9Y6H5 919 aa19.34■□□□□ 0.69
VPS33A-206ENST00000542310 SLF2Q8IX21 1173 aa19.33■□□□□ 0.68
VPS33A-206ENST00000542310 TMEM57Q8N5G2 664 aa19.33■□□□□ 0.68
VPS33A-206ENST00000542310 XAGE2Q96GT9 111 aa19.33■□□□□ 0.68
VPS33A-206ENST00000542310 ZNF341Q9BYN7 854 aa19.33■□□□□ 0.68
VPS33A-206ENST00000542310 PNMA6EA0A0J9YXQ4 647 aa19.32■□□□□ 0.68
VPS33A-206ENST00000542310 TIMM10P62072 90 aa19.32■□□□□ 0.68
VPS33A-206ENST00000542310 CRHR2Q13324 411 aa19.32■□□□□ 0.68
VPS33A-206ENST00000542310 SPTY2D1Q68D10 685 aaPredicted RBP19.32■□□□□ 0.68
VPS33A-206ENST00000542310 ERO1BQ86YB8 467 aa19.32■□□□□ 0.68
VPS33A-206ENST00000542310 DZIP1Q86YF9 867 aaKnown RBP19.32■□□□□ 0.68
VPS33A-206ENST00000542310 OTUD5Q96G74 571 aa19.32■□□□□ 0.68
VPS33A-206ENST00000542310 PTPN18Q99952 460 aa19.32■□□□□ 0.68
VPS33A-206ENST00000542310 ZCCHC17Q9NP64 241 aaKnown RBP19.32■□□□□ 0.68
VPS33A-206ENST00000542310 PPIL2Q13356 520 aa19.31■□□□□ 0.68
VPS33A-206ENST00000542310 FTSJ3Q8IY81 847 aaKnown RBP19.31■□□□□ 0.68
VPS33A-206ENST00000542310 CNKSR2Q8WXI2 1034 aa19.31■□□□□ 0.68
VPS33A-206ENST00000542310 BRI3BPQ8WY22 251 aa19.31■□□□□ 0.68
VPS33A-206ENST00000542310 FAM163AQ96GL9 167 aaPredicted RBP19.31■□□□□ 0.68
VPS33A-206ENST00000542310 ERO1AQ96HE7 468 aa19.31■□□□□ 0.68
VPS33A-206ENST00000542310 IDI2Q9BXS1 227 aa19.31■□□□□ 0.68
VPS33A-206ENST00000542310 RBBP6Q7Z6E9 1792 aaKnown RBP19.31■□□□□ 0.68
VPS33A-206ENST00000542310 HTTP42858 3142 aa19.31■□□□□ 0.68
VPS33A-206ENST00000542310 CCL15-CCL14A0A0B4J2E2 113 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 ARID4AP29374 1257 aaPredicted RBP19.3■□□□□ 0.68
VPS33A-206ENST00000542310 NFIAQ12857 509 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 G3BP1Q13283 466 aaKnown RBP eCLIP19.3■□□□□ 0.68
VPS33A-206ENST00000542310 POLA2Q14181 598 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 CCL15Q16663 113 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 USP40Q9NVE5 1235 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 FAM198AQ9UFP1 575 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 ZNF112Q9UJU3 913 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 DOCK1Q14185 1865 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 ATRNL1Q5VV63 1379 aa19.3■□□□□ 0.68
VPS33A-206ENST00000542310 MROH7-TTC4A0A0A0MT08 1334 aa19.29■□□□□ 0.68
VPS33A-206ENST00000542310 ENTPD3O75355 529 aa19.29■□□□□ 0.68
VPS33A-206ENST00000542310 CETPP11597 493 aa19.29■□□□□ 0.68
VPS33A-206ENST00000542310 NOL9Q5SY16 702 aaKnown RBP19.29■□□□□ 0.68
VPS33A-206ENST00000542310 ABCF2Q9UG63 623 aa19.29■□□□□ 0.68
VPS33A-206ENST00000542310 PPATQ06203 517 aa19.28■□□□□ 0.68
VPS33A-206ENST00000542310 TCP10Q12799 353 aa19.28■□□□□ 0.68
VPS33A-206ENST00000542310 SNAPC2Q13487 334 aa19.28■□□□□ 0.68
VPS33A-206ENST00000542310 SSH3Q8TE77 659 aa19.28■□□□□ 0.68
VPS33A-206ENST00000542310 ZKSCAN4Q969J2 545 aaPredicted RBP19.28■□□□□ 0.68
VPS33A-206ENST00000542310 GPR108Q9NPR9 543 aa19.28■□□□□ 0.68
VPS33A-206ENST00000542310 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP19.28■□□□□ 0.68
VPS33A-206ENST00000542310 COL2A1P02458 1487 aaPredicted RBP19.28■□□□□ 0.68
VPS33A-206ENST00000542310 PTPRFP10586 1907 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 WDHD1O75717 1129 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-206ENST00000542310 MAP4K4O95819 1239 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-206ENST00000542310 SOX10P56693 466 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 TAF1CQ15572 869 aaPredicted RBP19.27■□□□□ 0.68
VPS33A-206ENST00000542310 ERICH6Q7L0X2 663 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 OTOP1Q7RTM1 612 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 NEUROD6Q96NK8 337 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 ZFYVE28Q9HCC9 887 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 HMG20BQ9P0W2 317 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 TRIM17Q9Y577 477 aa19.27■□□□□ 0.68
VPS33A-206ENST00000542310 FOCADQ5VW36 1801 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 IRF6O14896 467 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 UQCRFS1P1P0C7P4 283 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 RGS3P49796 1198 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 SP3Q02447 781 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 GORABQ5T7V8 394 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 MIGA2Q7L4E1 593 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 FAM43AQ8N2R8 423 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 SPATA5Q8NB90 893 aa19.26■□□□□ 0.67
VPS33A-206ENST00000542310 PHIPQ8WWQ0 1821 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 TNRC18O15417 2968 aaPredicted RBP19.25■□□□□ 0.67
VPS33A-206ENST00000542310 NPM3O75607 178 aaKnown RBP19.25■□□□□ 0.67
VPS33A-206ENST00000542310 INPP5BP32019 993 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 BTDP43251 543 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 GSTO1P78417 241 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 ATP8B2P98198 1209 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 MECOMQ03112 1051 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 ITPRIPQ8IWB1 547 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 CD99L2Q8TCZ2 262 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 KCNH4Q9UQ05 1017 aa19.25■□□□□ 0.67
VPS33A-206ENST00000542310 CDK5RAP2Q96SN8 1893 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 879 ms